Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm9830-201ENSMUST00000178509 357 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Mir669a-7-201ENSMUST00000180364 87 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Mir669a-6-201ENSMUST00000196127 87 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Mir669a-12-201ENSMUST00000197274 87 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Mir669a-5-201ENSMUST00000197439 87 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Mir669a-10-201ENSMUST00000197745 87 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Mir669a-11-201ENSMUST00000197952 87 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Mir669a-4-201ENSMUST00000198665 87 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Mir669a-9-201ENSMUST00000200087 87 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Mir669a-8-201ENSMUST00000200268 87 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Mir7215-201ENSMUST00000200383 51 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Gm44182-201ENSMUST00000204052 115 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Gm2829-201ENSMUST00000213121 499 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Gm22997-201ENSMUST00000082845 107 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Gm26265-201ENSMUST00000083277 135 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Gm25896-201ENSMUST00000083713 136 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Gm22365-201ENSMUST00000093750 117 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.43□□□□□ -2.02
Nup88Q8CEC0 Gm13439-201ENSMUST00000117541 409 ntBASIC2.43□□□□□ -2.02
Nup88Q8CEC0 Gm22791-201ENSMUST00000157232 145 ntBASIC2.43□□□□□ -2.02
Nup88Q8CEC0 Gm22037-201ENSMUST00000157280 296 ntBASIC2.43□□□□□ -2.02
Nup88Q8CEC0 Gm25460-201ENSMUST00000157954 127 ntBASIC2.43□□□□□ -2.02
Nup88Q8CEC0 Gm7953-201ENSMUST00000168278 469 ntBASIC2.43□□□□□ -2.02
Nup88Q8CEC0 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Nup88Q8CEC0 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC2.43□□□□□ -2.02
Nup88Q8CEC0 Gm38041-201ENSMUST00000194445 661 ntBASIC2.43□□□□□ -2.02
Nup88Q8CEC0 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.43□□□□□ -2.02
Nup88Q8CEC0 Gm22364-201ENSMUST00000083097 98 ntBASIC2.43□□□□□ -2.02
Nup88Q8CEC0 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.43□□□□□ -2.02
Nup88Q8CEC0 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.42□□□□□ -2.02
Nup88Q8CEC0 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Nup88Q8CEC0 Gm24098-201ENSMUST00000102075 109 ntBASIC2.42□□□□□ -2.02
Nup88Q8CEC0 Gm25381-201ENSMUST00000102078 109 ntBASIC2.42□□□□□ -2.02
Nup88Q8CEC0 Gm14624-201ENSMUST00000117746 192 ntBASIC2.42□□□□□ -2.02
Nup88Q8CEC0 Gm25827-201ENSMUST00000157089 107 ntBASIC2.42□□□□□ -2.02
Nup88Q8CEC0 Gm24237-201ENSMUST00000157790 132 ntBASIC2.42□□□□□ -2.02
Nup88Q8CEC0 Gm22535-201ENSMUST00000158174 119 ntBASIC2.42□□□□□ -2.02
Nup88Q8CEC0 Gm26159-201ENSMUST00000158968 104 ntBASIC2.42□□□□□ -2.02
Nup88Q8CEC0 Gm25956-201ENSMUST00000175115 217 ntBASIC2.42□□□□□ -2.02
Nup88Q8CEC0 Mir28b-201ENSMUST00000175399 80 ntBASIC2.42□□□□□ -2.02
Nup88Q8CEC0 Mir6399-201ENSMUST00000184050 84 ntBASIC2.42□□□□□ -2.02
Nup88Q8CEC0 Gm10105-201ENSMUST00000184601 270 ntBASIC2.42□□□□□ -2.02
Nup88Q8CEC0 Gm27991-201ENSMUST00000184804 137 ntBASIC2.42□□□□□ -2.02
Nup88Q8CEC0 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Nup88Q8CEC0 Gm43472-201ENSMUST00000200175 154 ntBASIC2.42□□□□□ -2.02
Nup88Q8CEC0 Gm34783-201ENSMUST00000209159 303 ntBASIC2.42□□□□□ -2.02
Nup88Q8CEC0 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.42□□□□□ -2.02
Nup88Q8CEC0 CT009713.9-201ENSMUST00000223604 389 ntBASIC2.42□□□□□ -2.02
Nup88Q8CEC0 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Nup88Q8CEC0 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.42□□□□□ -2.02
Nup88Q8CEC0 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.42□□□□□ -2.02
Nup88Q8CEC0 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Nup88Q8CEC0 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
Nup88Q8CEC0 Gm23589-201ENSMUST00000157660 105 ntBASIC2.41□□□□□ -2.02
Nup88Q8CEC0 Gm7592-201ENSMUST00000160674 627 ntBASIC2.41□□□□□ -2.02
Nup88Q8CEC0 Gm22800-201ENSMUST00000175627 94 ntBASIC2.41□□□□□ -2.02
Nup88Q8CEC0 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.41□□□□□ -2.02
Nup88Q8CEC0 Mir3569-201ENSMUST00000185080 58 ntBASIC2.41□□□□□ -2.02
Nup88Q8CEC0 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Nup88Q8CEC0 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Nup88Q8CEC0 Gm20257-202ENSMUST00000188643 130 ntBASIC2.41□□□□□ -2.02
Nup88Q8CEC0 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Nup88Q8CEC0 Gm45150-201ENSMUST00000206051 467 ntBASIC2.41□□□□□ -2.02
Nup88Q8CEC0 Gm18991-201ENSMUST00000209225 746 ntBASIC2.41□□□□□ -2.02
Nup88Q8CEC0 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.41□□□□□ -2.02
Nup88Q8CEC0 Gm23721-201ENSMUST00000083005 107 ntBASIC2.41□□□□□ -2.02
Nup88Q8CEC0 Gm25578-201ENSMUST00000083406 104 ntBASIC2.41□□□□□ -2.02
Nup88Q8CEC0 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.41□□□□□ -2.02
Nup88Q8CEC0 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.41□□□□□ -2.02
Nup88Q8CEC0 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Nup88Q8CEC0 Gm13885-201ENSMUST00000117569 187 ntBASIC2.4□□□□□ -2.03
Nup88Q8CEC0 Gm13588-201ENSMUST00000120026 135 ntBASIC2.4□□□□□ -2.03
Nup88Q8CEC0 Gm25321-201ENSMUST00000122558 102 ntBASIC2.4□□□□□ -2.03
Nup88Q8CEC0 Gm25888-201ENSMUST00000157778 302 ntBASIC2.4□□□□□ -2.03
Nup88Q8CEC0 Gm24177-201ENSMUST00000158927 131 ntBASIC2.4□□□□□ -2.03
Nup88Q8CEC0 Mir6376-201ENSMUST00000185149 131 ntBASIC2.4□□□□□ -2.03
Nup88Q8CEC0 AC109212.1-201ENSMUST00000215561 427 ntBASIC2.4□□□□□ -2.03
Nup88Q8CEC0 Gm33654-201ENSMUST00000221704 215 ntBASIC2.4□□□□□ -2.03
Nup88Q8CEC0 Gm21937-201ENSMUST00000222825 218 ntBASIC2.4□□□□□ -2.03
Nup88Q8CEC0 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.4□□□□□ -2.03
Nup88Q8CEC0 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.4□□□□□ -2.03
Nup88Q8CEC0 Mir758-201ENSMUST00000103260 81 ntBASIC2.39□□□□□ -2.03
Nup88Q8CEC0 Gm6444-201ENSMUST00000119611 458 ntBASIC2.39□□□□□ -2.03
Nup88Q8CEC0 Gm24892-201ENSMUST00000122747 104 ntBASIC2.39□□□□□ -2.03
Nup88Q8CEC0 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Nup88Q8CEC0 Gm23230-201ENSMUST00000157298 133 ntBASIC2.39□□□□□ -2.03
Nup88Q8CEC0 Gm25909-201ENSMUST00000157619 121 ntBASIC2.39□□□□□ -2.03
Nup88Q8CEC0 Gm24853-201ENSMUST00000158026 121 ntBASIC2.39□□□□□ -2.03
Nup88Q8CEC0 Gm24858-201ENSMUST00000158058 323 ntBASIC2.39□□□□□ -2.03
Nup88Q8CEC0 Gm25996-201ENSMUST00000175393 117 ntBASIC2.39□□□□□ -2.03
Nup88Q8CEC0 Gm25121-201ENSMUST00000179846 79 ntBASIC2.39□□□□□ -2.03
Nup88Q8CEC0 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
Nup88Q8CEC0 Gm37399-201ENSMUST00000195224 416 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 132.4 ms