Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Mir7016-201ENSMUST00000184308 72 ntBASIC2.5□□□□□ -2.01
Atg4aQ8C9S8 Mir6901-201ENSMUST00000185062 62 ntBASIC2.5□□□□□ -2.01
Atg4aQ8C9S8 Gm43991-201ENSMUST00000203751 274 ntBASIC2.5□□□□□ -2.01
Atg4aQ8C9S8 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.5□□□□□ -2.01
Atg4aQ8C9S8 Gm45013-201ENSMUST00000206883 178 ntBASIC2.5□□□□□ -2.01
Atg4aQ8C9S8 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Atg4aQ8C9S8 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Atg4aQ8C9S8 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm24282-201ENSMUST00000104232 66 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm12941-201ENSMUST00000117934 220 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm14298-201ENSMUST00000139032 237 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm16356-201ENSMUST00000143300 169 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm24478-201ENSMUST00000157439 158 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm26345-201ENSMUST00000157534 120 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm23003-201ENSMUST00000179948 107 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm29512-201ENSMUST00000185544 315 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm28110-201ENSMUST00000185782 315 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm29057-201ENSMUST00000186468 315 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm29661-201ENSMUST00000186781 315 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm28737-201ENSMUST00000186808 315 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm29118-201ENSMUST00000186908 315 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm28433-201ENSMUST00000187085 315 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm28759-201ENSMUST00000187621 315 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm28831-201ENSMUST00000187739 315 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm28200-201ENSMUST00000187778 315 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm28752-201ENSMUST00000188340 315 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm6060-201ENSMUST00000188671 251 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm29378-201ENSMUST00000188723 315 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm28569-201ENSMUST00000188748 315 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm28120-201ENSMUST00000188812 315 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm28369-201ENSMUST00000188993 315 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm29037-201ENSMUST00000189092 313 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm28909-201ENSMUST00000189406 315 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm28861-201ENSMUST00000189681 315 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm29180-201ENSMUST00000190003 315 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm29575-201ENSMUST00000190597 315 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm29469-201ENSMUST00000191448 315 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm37162-201ENSMUST00000191708 551 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm37377-201ENSMUST00000191733 304 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Trbv7-201ENSMUST00000193339 402 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm38019-201ENSMUST00000195133 380 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm43680-201ENSMUST00000199466 340 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm45207-201ENSMUST00000207469 145 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm40810-201ENSMUST00000219149 253 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm23406-201ENSMUST00000082537 122 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm24698-201ENSMUST00000083883 130 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.49□□□□□ -2.01
Atg4aQ8C9S8 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC2.48□□□□□ -2.01
Atg4aQ8C9S8 Gm13433-201ENSMUST00000121701 240 ntBASIC2.48□□□□□ -2.01
Atg4aQ8C9S8 Mir1898-201ENSMUST00000122643 83 ntBASIC2.48□□□□□ -2.01
Atg4aQ8C9S8 Gm23214-201ENSMUST00000122716 157 ntBASIC2.48□□□□□ -2.01
Atg4aQ8C9S8 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2.48□□□□□ -2.01
Atg4aQ8C9S8 Gm26099-201ENSMUST00000157248 109 ntBASIC2.48□□□□□ -2.01
Atg4aQ8C9S8 Gm24601-201ENSMUST00000157970 143 ntBASIC2.48□□□□□ -2.01
Atg4aQ8C9S8 Gm24878-201ENSMUST00000158782 104 ntBASIC2.48□□□□□ -2.01
Atg4aQ8C9S8 Gm24487-201ENSMUST00000178017 63 ntBASIC2.48□□□□□ -2.01
Atg4aQ8C9S8 Gm9830-201ENSMUST00000178509 357 ntBASIC2.48□□□□□ -2.01
Atg4aQ8C9S8 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.48□□□□□ -2.01
Atg4aQ8C9S8 Gm28724-201ENSMUST00000186149 625 ntBASIC2.48□□□□□ -2.01
Atg4aQ8C9S8 Gm43901-201ENSMUST00000203247 453 ntBASIC2.48□□□□□ -2.01
Atg4aQ8C9S8 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.48□□□□□ -2.01
Atg4aQ8C9S8 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.48□□□□□ -2.01
Atg4aQ8C9S8 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.48□□□□□ -2.01
Atg4aQ8C9S8 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.48□□□□□ -2.01
Atg4aQ8C9S8 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Atg4aQ8C9S8 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Atg4aQ8C9S8 Gm25111-201ENSMUST00000116686 147 ntBASIC2.47□□□□□ -2.01
Atg4aQ8C9S8 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Atg4aQ8C9S8 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC2.47□□□□□ -2.01
Atg4aQ8C9S8 Gm24908-201ENSMUST00000157294 127 ntBASIC2.47□□□□□ -2.01
Atg4aQ8C9S8 Gm23331-201ENSMUST00000157423 108 ntBASIC2.47□□□□□ -2.01
Atg4aQ8C9S8 Gm22945-201ENSMUST00000158557 157 ntBASIC2.47□□□□□ -2.01
Atg4aQ8C9S8 Gm17100-201ENSMUST00000168963 272 ntBASIC2.47□□□□□ -2.01
Atg4aQ8C9S8 Gm28995-201ENSMUST00000186625 261 ntBASIC2.47□□□□□ -2.01
Atg4aQ8C9S8 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.47□□□□□ -2.01
Atg4aQ8C9S8 Gm37923-201ENSMUST00000191624 161 ntBASIC2.47□□□□□ -2.01
Atg4aQ8C9S8 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.47□□□□□ -2.01
Atg4aQ8C9S8 Mir7227-201ENSMUST00000200408 59 ntBASIC2.47□□□□□ -2.01
Atg4aQ8C9S8 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.47□□□□□ -2.01
Atg4aQ8C9S8 Gm23453-201ENSMUST00000083326 106 ntBASIC2.47□□□□□ -2.01
Atg4aQ8C9S8 Gm26329-201ENSMUST00000093723 110 ntBASIC2.47□□□□□ -2.01
Atg4aQ8C9S8 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.46□□□□□ -2.01
Atg4aQ8C9S8 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Atg4aQ8C9S8 Gm25315-201ENSMUST00000116823 121 ntBASIC2.46□□□□□ -2.02
Atg4aQ8C9S8 Gm23551-201ENSMUST00000116852 121 ntBASIC2.46□□□□□ -2.02
Atg4aQ8C9S8 Gm14073-201ENSMUST00000117344 381 ntBASIC2.46□□□□□ -2.02
Atg4aQ8C9S8 Gm16328-201ENSMUST00000126985 196 ntBASIC2.46□□□□□ -2.02
Atg4aQ8C9S8 Gm8292-201ENSMUST00000162574 396 ntBASIC2.46□□□□□ -2.02
Atg4aQ8C9S8 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.46□□□□□ -2.02
Atg4aQ8C9S8 Gm22192-201ENSMUST00000175128 85 ntBASIC2.46□□□□□ -2.02
Atg4aQ8C9S8 Gm29553-201ENSMUST00000189692 279 ntBASIC2.46□□□□□ -2.02
Atg4aQ8C9S8 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.46□□□□□ -2.02
Atg4aQ8C9S8 Gm42739-201ENSMUST00000200687 226 ntBASIC2.46□□□□□ -2.02
Atg4aQ8C9S8 Gm44960-201ENSMUST00000207403 141 ntBASIC2.46□□□□□ -2.02
Atg4aQ8C9S8 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Atg4aQ8C9S8 Gm25632-201ENSMUST00000083112 85 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms