Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Gm24244-201ENSMUST00000157317 130 ntBASIC3.17□□□□□ -1.9
Ube3dQ8BX13 Gm25599-201ENSMUST00000157816 103 ntBASIC3.17□□□□□ -1.9
Ube3dQ8BX13 Gm24553-201ENSMUST00000158653 131 ntBASIC3.17□□□□□ -1.9
Ube3dQ8BX13 Gm22853-201ENSMUST00000174974 131 ntBASIC3.17□□□□□ -1.9
Ube3dQ8BX13 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.17□□□□□ -1.9
Ube3dQ8BX13 Snord80-202ENSMUST00000199023 77 ntBASIC3.17□□□□□ -1.9
Ube3dQ8BX13 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.17□□□□□ -1.9
Ube3dQ8BX13 Mir721-201ENSMUST00000200230 88 ntBASIC3.17□□□□□ -1.9
Ube3dQ8BX13 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.17□□□□□ -1.9
Ube3dQ8BX13 AC101945.1-201ENSMUST00000226734 466 ntBASIC3.17□□□□□ -1.9
Ube3dQ8BX13 Snora7a-201ENSMUST00000082629 140 ntBASIC3.17□□□□□ -1.9
Ube3dQ8BX13 Gm25480-201ENSMUST00000083217 133 ntBASIC3.17□□□□□ -1.9
Ube3dQ8BX13 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ube3dQ8BX13 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ube3dQ8BX13 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
Ube3dQ8BX13 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ube3dQ8BX13 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Gm15282-201ENSMUST00000117707 300 ntBASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Gm6071-201ENSMUST00000119561 440 ntBASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Gm6762-201ENSMUST00000121769 289 ntBASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Gm22792-201ENSMUST00000157225 133 ntBASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Gm24480-201ENSMUST00000157442 103 ntBASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Gm22310-201ENSMUST00000157509 116 ntBASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Mir5127-201ENSMUST00000175295 71 ntBASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Gm25748-201ENSMUST00000175487 70 ntBASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Gm28010-201ENSMUST00000179485 126 ntBASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Gm28992-201ENSMUST00000190534 139 ntBASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Gm44355-201ENSMUST00000200417 104 ntBASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Gm44024-201ENSMUST00000203008 476 ntBASIC3.16□□□□□ -1.9
Ube3dQ8BX13 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Gm46993-201ENSMUST00000220708 259 ntBASIC3.16□□□□□ -1.9
Ube3dQ8BX13 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Gm23925-201ENSMUST00000082471 132 ntBASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.16□□□□□ -1.9
Ube3dQ8BX13 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.9
Ube3dQ8BX13 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Ube3dQ8BX13 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ube3dQ8BX13 Gm23532-201ENSMUST00000104569 112 ntBASIC3.15□□□□□ -1.91
Ube3dQ8BX13 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.15□□□□□ -1.91
Ube3dQ8BX13 Gm25425-201ENSMUST00000157611 96 ntBASIC3.15□□□□□ -1.91
Ube3dQ8BX13 Gm20399-201ENSMUST00000174652 132 ntBASIC3.15□□□□□ -1.91
Ube3dQ8BX13 Gm27903-201ENSMUST00000175482 126 ntBASIC3.15□□□□□ -1.91
Ube3dQ8BX13 Mir466b-1-201ENSMUST00000177988 82 ntBASIC3.15□□□□□ -1.91
Ube3dQ8BX13 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.15□□□□□ -1.91
Ube3dQ8BX13 Gm34139-201ENSMUST00000196166 294 ntBASIC3.15□□□□□ -1.91
Ube3dQ8BX13 Gm33866-201ENSMUST00000196911 289 ntBASIC3.15□□□□□ -1.91
Ube3dQ8BX13 Mir1291-201ENSMUST00000199842 117 ntBASIC3.15□□□□□ -1.91
Ube3dQ8BX13 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.15□□□□□ -1.91
Ube3dQ8BX13 AC114010.1-201ENSMUST00000222060 379 ntBASIC3.15□□□□□ -1.91
Ube3dQ8BX13 Gm25634-201ENSMUST00000082667 105 ntBASIC3.15□□□□□ -1.91
Ube3dQ8BX13 Snora34-201ENSMUST00000083402 138 ntBASIC3.15□□□□□ -1.91
Ube3dQ8BX13 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.15□□□□□ -1.91
Ube3dQ8BX13 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Ube3dQ8BX13 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ube3dQ8BX13 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
Ube3dQ8BX13 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Ube3dQ8BX13 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Gm26135-201ENSMUST00000101993 72 ntBASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Gm24403-201ENSMUST00000104616 130 ntBASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Gm14687-201ENSMUST00000120206 363 ntBASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Gm12858-201ENSMUST00000121913 208 ntBASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Snord50b-201ENSMUST00000178497 72 ntBASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Gm5224-201ENSMUST00000183060 350 ntBASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Mir6408-201ENSMUST00000183643 91 ntBASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Gm27698-201ENSMUST00000184060 249 ntBASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Gm17966-201ENSMUST00000193453 594 ntBASIC3.14□□□□□ -1.91
Ube3dQ8BX13 AC154552.7-201ENSMUST00000222824 156 ntBASIC3.14□□□□□ -1.91
Ube3dQ8BX13 AC154282.1-201ENSMUST00000223154 265 ntBASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Gm4945-201ENSMUST00000075152 453 ntBASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Gm24147-201ENSMUST00000082763 144 ntBASIC3.14□□□□□ -1.91
Ube3dQ8BX13 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Gm10212-201ENSMUST00000087884 324 ntBASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ube3dQ8BX13 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Ube3dQ8BX13 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ube3dQ8BX13 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Ube3dQ8BX13 Gm25272-201ENSMUST00000104293 128 ntBASIC3.13□□□□□ -1.91
Ube3dQ8BX13 Gm22193-201ENSMUST00000116868 76 ntBASIC3.13□□□□□ -1.91
Ube3dQ8BX13 Gm25985-201ENSMUST00000122677 107 ntBASIC3.13□□□□□ -1.91
Ube3dQ8BX13 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.13□□□□□ -1.91
Ube3dQ8BX13 Gm23588-201ENSMUST00000157659 99 ntBASIC3.13□□□□□ -1.91
Ube3dQ8BX13 Gm23642-201ENSMUST00000157858 258 ntBASIC3.13□□□□□ -1.91
Ube3dQ8BX13 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC3.13□□□□□ -1.91
Ube3dQ8BX13 Gm28314-201ENSMUST00000191276 345 ntBASIC3.13□□□□□ -1.91
Ube3dQ8BX13 Gm37698-201ENSMUST00000192605 463 ntBASIC3.13□□□□□ -1.91
Ube3dQ8BX13 Gm45116-201ENSMUST00000207392 275 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 109.4 ms