Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.76□□□□□ -2.13
Ccdc40Q8BI79 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Ccdc40Q8BI79 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.76□□□□□ -2.13
Ccdc40Q8BI79 Gm24977-201ENSMUST00000083106 163 ntBASIC1.76□□□□□ -2.13
Ccdc40Q8BI79 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.75□□□□□ -2.13
Ccdc40Q8BI79 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Ccdc40Q8BI79 Mir743b-201ENSMUST00000104751 77 ntBASIC1.75□□□□□ -2.13
Ccdc40Q8BI79 Gm22221-201ENSMUST00000157362 103 ntBASIC1.75□□□□□ -2.13
Ccdc40Q8BI79 Gm23557-201ENSMUST00000157820 138 ntBASIC1.75□□□□□ -2.13
Ccdc40Q8BI79 Mir669n-201ENSMUST00000158636 54 ntBASIC1.75□□□□□ -2.13
Ccdc40Q8BI79 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.75□□□□□ -2.13
Ccdc40Q8BI79 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Ccdc40Q8BI79 Mir6351-201ENSMUST00000183826 99 ntBASIC1.75□□□□□ -2.13
Ccdc40Q8BI79 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.75□□□□□ -2.13
Ccdc40Q8BI79 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.75□□□□□ -2.13
Ccdc40Q8BI79 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.75□□□□□ -2.13
Ccdc40Q8BI79 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Gm23109-201ENSMUST00000116867 126 ntBASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Gm23718-201ENSMUST00000157350 307 ntBASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Gm25163-201ENSMUST00000158905 104 ntBASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Gm23090-201ENSMUST00000177331 78 ntBASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Gm33866-201ENSMUST00000196911 289 ntBASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Gm44429-201ENSMUST00000203542 186 ntBASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Gm45315-201ENSMUST00000209283 333 ntBASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 AC144733.1-201ENSMUST00000222893 1289 ntBASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Gm22683-201ENSMUST00000082854 137 ntBASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.74□□□□□ -2.13
Ccdc40Q8BI79 Mir374b-201ENSMUST00000102314 95 ntBASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 Gm25992-201ENSMUST00000102437 109 ntBASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 Mir758-201ENSMUST00000103260 81 ntBASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 Gm25541-201ENSMUST00000116888 126 ntBASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 Gm22793-201ENSMUST00000157227 330 ntBASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 Gm22316-201ENSMUST00000158012 216 ntBASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 Gm26024-201ENSMUST00000158657 322 ntBASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 Gm26501-201ENSMUST00000178307 107 ntBASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 Gm20874-201ENSMUST00000178356 663 ntBASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 Gm11392-201ENSMUST00000181419 710 ntBASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 Gm22972-201ENSMUST00000083297 131 ntBASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 Gm26066-201ENSMUST00000083385 109 ntBASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Ccdc40Q8BI79 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.72□□□□□ -2.13
Ccdc40Q8BI79 Gm25507-201ENSMUST00000116981 144 ntBASIC1.72□□□□□ -2.13
Ccdc40Q8BI79 Gm15861-201ENSMUST00000120979 339 ntBASIC1.72□□□□□ -2.13
Ccdc40Q8BI79 Gm25279-201ENSMUST00000122608 133 ntBASIC1.72□□□□□ -2.13
Ccdc40Q8BI79 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.72□□□□□ -2.13
Ccdc40Q8BI79 Mir7679-201ENSMUST00000183379 63 ntBASIC1.72□□□□□ -2.13
Ccdc40Q8BI79 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC1.72□□□□□ -2.13
Ccdc40Q8BI79 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC1.72□□□□□ -2.13
Ccdc40Q8BI79 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC1.72□□□□□ -2.13
Ccdc40Q8BI79 Gm43245-201ENSMUST00000197603 468 ntBASIC1.72□□□□□ -2.13
Ccdc40Q8BI79 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.72□□□□□ -2.13
Ccdc40Q8BI79 Gm46312-201ENSMUST00000220961 420 ntBASIC1.72□□□□□ -2.13
Ccdc40Q8BI79 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.72□□□□□ -2.13
Ccdc40Q8BI79 Gm24623-201ENSMUST00000082616 194 ntBASIC1.72□□□□□ -2.13
Ccdc40Q8BI79 Gm26108-201ENSMUST00000083973 191 ntBASIC1.72□□□□□ -2.13
Ccdc40Q8BI79 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Ccdc40Q8BI79 Gm15526-201ENSMUST00000112504 204 ntBASIC1.71□□□□□ -2.14
Ccdc40Q8BI79 Gm13432-201ENSMUST00000118861 241 ntBASIC1.71□□□□□ -2.14
Ccdc40Q8BI79 Gm13153-201ENSMUST00000120969 637 ntBASIC1.71□□□□□ -2.14
Ccdc40Q8BI79 Gm14972-201ENSMUST00000121780 364 ntBASIC1.71□□□□□ -2.14
Ccdc40Q8BI79 Mir3057-201ENSMUST00000175040 91 ntBASIC1.71□□□□□ -2.14
Ccdc40Q8BI79 Gm22263-201ENSMUST00000180060 104 ntBASIC1.71□□□□□ -2.14
Ccdc40Q8BI79 Gm27265-201ENSMUST00000183559 77 ntBASIC1.71□□□□□ -2.14
Ccdc40Q8BI79 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
Ccdc40Q8BI79 Trbv22-201ENSMUST00000191697 291 ntBASIC1.71□□□□□ -2.14
Ccdc40Q8BI79 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC1.71□□□□□ -2.14
Ccdc40Q8BI79 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.71□□□□□ -2.14
Ccdc40Q8BI79 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC1.71□□□□□ -2.14
Ccdc40Q8BI79 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Ccdc40Q8BI79 Gm26922-201ENSMUST00000082687 72 ntBASIC1.71□□□□□ -2.14
Ccdc40Q8BI79 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Ccdc40Q8BI79 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Ccdc40Q8BI79 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.71□□□□□ -2.14
Ccdc40Q8BI79 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Ccdc40Q8BI79 Gm22834-201ENSMUST00000102021 79 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms