Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.29□□□□□ -2.2
Clrn3Q8BHH8 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.29□□□□□ -2.2
Clrn3Q8BHH8 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Clrn3Q8BHH8 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.29□□□□□ -2.2
Clrn3Q8BHH8 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
Clrn3Q8BHH8 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.29□□□□□ -2.2
Clrn3Q8BHH8 Gm43556-201ENSMUST00000196186 681 ntBASIC1.29□□□□□ -2.2
Clrn3Q8BHH8 Gm44446-201ENSMUST00000204864 255 ntBASIC1.29□□□□□ -2.2
Clrn3Q8BHH8 Gm44654-201ENSMUST00000208052 329 ntBASIC1.29□□□□□ -2.2
Clrn3Q8BHH8 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.29□□□□□ -2.2
Clrn3Q8BHH8 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.29□□□□□ -2.2
Clrn3Q8BHH8 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Clrn3Q8BHH8 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.29□□□□□ -2.2
Clrn3Q8BHH8 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Clrn3Q8BHH8 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Clrn3Q8BHH8 Gm22750-201ENSMUST00000102076 103 ntBASIC1.28□□□□□ -2.2
Clrn3Q8BHH8 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Clrn3Q8BHH8 Gm16242-201ENSMUST00000117741 334 ntBASIC1.28□□□□□ -2.2
Clrn3Q8BHH8 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.28□□□□□ -2.2
Clrn3Q8BHH8 Gm23170-201ENSMUST00000157158 106 ntBASIC1.28□□□□□ -2.2
Clrn3Q8BHH8 Gm22221-201ENSMUST00000157362 103 ntBASIC1.28□□□□□ -2.2
Clrn3Q8BHH8 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.28□□□□□ -2.2
Clrn3Q8BHH8 Gm20438-201ENSMUST00000174441 329 ntBASIC1.28□□□□□ -2.2
Clrn3Q8BHH8 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC1.28□□□□□ -2.2
Clrn3Q8BHH8 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.28□□□□□ -2.2
Clrn3Q8BHH8 Mir3569-201ENSMUST00000185080 58 ntBASIC1.28□□□□□ -2.2
Clrn3Q8BHH8 Gm29397-201ENSMUST00000185205 333 ntBASIC1.28□□□□□ -2.2
Clrn3Q8BHH8 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.28□□□□□ -2.2
Clrn3Q8BHH8 Gm28437-201ENSMUST00000190277 783 ntBASIC1.28□□□□□ -2.2
Clrn3Q8BHH8 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.28□□□□□ -2.2
Clrn3Q8BHH8 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Clrn3Q8BHH8 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.28□□□□□ -2.2
Clrn3Q8BHH8 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.27□□□□□ -2.21
Clrn3Q8BHH8 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Clrn3Q8BHH8 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Clrn3Q8BHH8 Gm25759-201ENSMUST00000103988 129 ntBASIC1.27□□□□□ -2.21
Clrn3Q8BHH8 Gm11606-201ENSMUST00000120706 617 ntBASIC1.27□□□□□ -2.21
Clrn3Q8BHH8 Gm23124-201ENSMUST00000157650 107 ntBASIC1.27□□□□□ -2.21
Clrn3Q8BHH8 Gm22654-201ENSMUST00000157874 105 ntBASIC1.27□□□□□ -2.21
Clrn3Q8BHH8 Gm23090-201ENSMUST00000177331 78 ntBASIC1.27□□□□□ -2.21
Clrn3Q8BHH8 Gm22263-201ENSMUST00000180060 104 ntBASIC1.27□□□□□ -2.21
Clrn3Q8BHH8 Gm29352-201ENSMUST00000188054 544 ntBASIC1.27□□□□□ -2.21
Clrn3Q8BHH8 Gm38041-201ENSMUST00000194445 661 ntBASIC1.27□□□□□ -2.21
Clrn3Q8BHH8 Gm35212-201ENSMUST00000196672 606 ntBASIC1.27□□□□□ -2.21
Clrn3Q8BHH8 AC153968.2-201ENSMUST00000215579 1140 ntBASIC1.27□□□□□ -2.21
Clrn3Q8BHH8 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.27□□□□□ -2.21
Clrn3Q8BHH8 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.27□□□□□ -2.21
Clrn3Q8BHH8 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Clrn3Q8BHH8 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Gm12417-201ENSMUST00000119153 403 ntBASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Gm12309-201ENSMUST00000119889 182 ntBASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Gm23122-201ENSMUST00000157645 103 ntBASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Gm22099-201ENSMUST00000157925 123 ntBASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Gm23317-201ENSMUST00000157999 129 ntBASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Gm23854-201ENSMUST00000158378 108 ntBASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Mir3057-201ENSMUST00000175040 91 ntBASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Gm27624-201ENSMUST00000185047 177 ntBASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Gm38261-201ENSMUST00000192608 316 ntBASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Mir1291-201ENSMUST00000199842 117 ntBASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Gm44429-201ENSMUST00000203542 186 ntBASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Snord118-201ENSMUST00000082965 135 ntBASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Gm24536-201ENSMUST00000083144 107 ntBASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Snora34-201ENSMUST00000083402 138 ntBASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Gm25896-201ENSMUST00000083713 136 ntBASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.26□□□□□ -2.21
Clrn3Q8BHH8 AC124426.1-203ENSMUST00000221814 1362 ntBASIC1.25□□□□□ -2.21
Clrn3Q8BHH8 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.25□□□□□ -2.21
Clrn3Q8BHH8 Gm25068-201ENSMUST00000103895 110 ntBASIC1.25□□□□□ -2.21
Clrn3Q8BHH8 Gm26049-201ENSMUST00000157313 108 ntBASIC1.25□□□□□ -2.21
Clrn3Q8BHH8 Gm24902-201ENSMUST00000158126 123 ntBASIC1.25□□□□□ -2.21
Clrn3Q8BHH8 Gm24677-201ENSMUST00000158755 150 ntBASIC1.25□□□□□ -2.21
Clrn3Q8BHH8 Gm21815-201ENSMUST00000178213 664 ntBASIC1.25□□□□□ -2.21
Clrn3Q8BHH8 Gm22631-201ENSMUST00000179656 94 ntBASIC1.25□□□□□ -2.21
Clrn3Q8BHH8 Gm25936-201ENSMUST00000179952 114 ntBASIC1.25□□□□□ -2.21
Clrn3Q8BHH8 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Clrn3Q8BHH8 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.25□□□□□ -2.21
Clrn3Q8BHH8 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.25□□□□□ -2.21
Clrn3Q8BHH8 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.25□□□□□ -2.21
Clrn3Q8BHH8 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.24□□□□□ -2.21
Clrn3Q8BHH8 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Clrn3Q8BHH8 Gm25832-201ENSMUST00000104140 130 ntBASIC1.24□□□□□ -2.21
Clrn3Q8BHH8 Gm23011-201ENSMUST00000104148 132 ntBASIC1.24□□□□□ -2.21
Clrn3Q8BHH8 Gm12584-201ENSMUST00000117109 1105 ntBASIC1.24□□□□□ -2.21
Clrn3Q8BHH8 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.24□□□□□ -2.21
Clrn3Q8BHH8 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.24□□□□□ -2.21
Clrn3Q8BHH8 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.24□□□□□ -2.21
Clrn3Q8BHH8 Gm25831-201ENSMUST00000158924 163 ntBASIC1.24□□□□□ -2.21
Clrn3Q8BHH8 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Clrn3Q8BHH8 Gm27013-201ENSMUST00000182441 1024 ntBASIC1.24□□□□□ -2.21
Clrn3Q8BHH8 Mir6419-201ENSMUST00000184784 113 ntBASIC1.24□□□□□ -2.21
Clrn3Q8BHH8 Gm28995-201ENSMUST00000186625 261 ntBASIC1.24□□□□□ -2.21
Clrn3Q8BHH8 Gm37869-201ENSMUST00000193385 595 ntBASIC1.24□□□□□ -2.21
Clrn3Q8BHH8 Gm37641-201ENSMUST00000193837 239 ntBASIC1.24□□□□□ -2.21
Clrn3Q8BHH8 Gm43245-201ENSMUST00000197603 468 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms