Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.9□□□□□ -2.11
Atg4bQ8BGE6 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.9□□□□□ -2.11
Atg4bQ8BGE6 Gm14624-201ENSMUST00000117746 192 ntBASIC1.89□□□□□ -2.11
Atg4bQ8BGE6 Gm12646-201ENSMUST00000119144 238 ntBASIC1.89□□□□□ -2.11
Atg4bQ8BGE6 Gm15536-201ENSMUST00000121411 114 ntBASIC1.89□□□□□ -2.11
Atg4bQ8BGE6 Gm24892-201ENSMUST00000122747 104 ntBASIC1.89□□□□□ -2.11
Atg4bQ8BGE6 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.89□□□□□ -2.11
Atg4bQ8BGE6 Gm25827-201ENSMUST00000157089 107 ntBASIC1.89□□□□□ -2.11
Atg4bQ8BGE6 Gm22791-201ENSMUST00000157232 145 ntBASIC1.89□□□□□ -2.11
Atg4bQ8BGE6 Gm24005-201ENSMUST00000158459 296 ntBASIC1.89□□□□□ -2.11
Atg4bQ8BGE6 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Atg4bQ8BGE6 Gm27443-201ENSMUST00000184660 98 ntBASIC1.89□□□□□ -2.11
Atg4bQ8BGE6 Gm37399-201ENSMUST00000195224 416 ntBASIC1.89□□□□□ -2.11
Atg4bQ8BGE6 Gm44337-201ENSMUST00000196553 114 ntBASIC1.89□□□□□ -2.11
Atg4bQ8BGE6 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.89□□□□□ -2.11
Atg4bQ8BGE6 AC164117.2-201ENSMUST00000222090 327 ntBASIC1.89□□□□□ -2.11
Atg4bQ8BGE6 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Atg4bQ8BGE6 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.89□□□□□ -2.11
Atg4bQ8BGE6 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Atg4bQ8BGE6 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Gm42606-201ENSMUST00000114209 239 ntBASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Gm14748-201ENSMUST00000119819 411 ntBASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Gm13433-201ENSMUST00000121701 240 ntBASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Gm25909-201ENSMUST00000157619 121 ntBASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Gm24853-201ENSMUST00000158026 121 ntBASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Gm25012-201ENSMUST00000158396 164 ntBASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Gm22800-201ENSMUST00000175627 94 ntBASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Gm37377-201ENSMUST00000191733 304 ntBASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Gm43238-201ENSMUST00000196463 359 ntBASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Mir378a-201ENSMUST00000198300 66 ntBASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Gm2829-201ENSMUST00000213121 499 ntBASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 AC154296.2-201ENSMUST00000214696 545 ntBASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Gm25578-201ENSMUST00000083406 104 ntBASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Mir222-201ENSMUST00000083537 79 ntBASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Mir181a-1-201ENSMUST00000083631 87 ntBASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.88□□□□□ -2.11
Atg4bQ8BGE6 Gm13885-201ENSMUST00000117569 187 ntBASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 Gm11420-201ENSMUST00000120047 402 ntBASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 Gm5396-201ENSMUST00000121222 532 ntBASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 Gm16328-201ENSMUST00000126985 196 ntBASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 Gm23469-201ENSMUST00000157131 104 ntBASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 Gm25711-201ENSMUST00000158633 128 ntBASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 Gm7953-201ENSMUST00000168278 469 ntBASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 Gm25707-201ENSMUST00000175120 96 ntBASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 Mir6346-201ENSMUST00000183982 81 ntBASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 Gm43914-201ENSMUST00000203592 594 ntBASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 Gm22062-201ENSMUST00000082563 107 ntBASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 Mir93-201ENSMUST00000083593 88 ntBASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 Gm26164-201ENSMUST00000083793 104 ntBASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
Atg4bQ8BGE6 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
Atg4bQ8BGE6 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Atg4bQ8BGE6 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Atg4bQ8BGE6 Gm14894-201ENSMUST00000117170 270 ntBASIC1.86□□□□□ -2.11
Atg4bQ8BGE6 Gm14670-201ENSMUST00000117327 337 ntBASIC1.86□□□□□ -2.11
Atg4bQ8BGE6 Gm14906-201ENSMUST00000119265 390 ntBASIC1.86□□□□□ -2.11
Atg4bQ8BGE6 Gm14775-201ENSMUST00000122089 310 ntBASIC1.86□□□□□ -2.11
Atg4bQ8BGE6 Gm22727-201ENSMUST00000158090 116 ntBASIC1.86□□□□□ -2.11
Atg4bQ8BGE6 Gm24053-201ENSMUST00000158620 105 ntBASIC1.86□□□□□ -2.11
Atg4bQ8BGE6 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.86□□□□□ -2.11
Atg4bQ8BGE6 Mir6901-201ENSMUST00000185062 62 ntBASIC1.86□□□□□ -2.11
Atg4bQ8BGE6 Gm37449-201ENSMUST00000193016 270 ntBASIC1.86□□□□□ -2.11
Atg4bQ8BGE6 Gm18658-201ENSMUST00000195558 270 ntBASIC1.86□□□□□ -2.11
Atg4bQ8BGE6 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Atg4bQ8BGE6 Gm7214-201ENSMUST00000222428 272 ntBASIC1.86□□□□□ -2.11
Atg4bQ8BGE6 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.86□□□□□ -2.11
Atg4bQ8BGE6 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.86□□□□□ -2.11
Atg4bQ8BGE6 Gm23721-201ENSMUST00000083005 107 ntBASIC1.86□□□□□ -2.11
Atg4bQ8BGE6 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Atg4bQ8BGE6 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Atg4bQ8BGE6 Gm13396-201ENSMUST00000120617 271 ntBASIC1.85□□□□□ -2.11
Atg4bQ8BGE6 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.85□□□□□ -2.11
Atg4bQ8BGE6 Gm25318-201ENSMUST00000122554 314 ntBASIC1.85□□□□□ -2.11
Atg4bQ8BGE6 Gm25888-201ENSMUST00000157778 302 ntBASIC1.85□□□□□ -2.11
Atg4bQ8BGE6 Gm22316-201ENSMUST00000158012 216 ntBASIC1.85□□□□□ -2.11
Atg4bQ8BGE6 Mir669a-7-201ENSMUST00000180364 87 ntBASIC1.85□□□□□ -2.11
Atg4bQ8BGE6 Gm26968-201ENSMUST00000182894 481 ntBASIC1.85□□□□□ -2.11
Atg4bQ8BGE6 Mir6399-201ENSMUST00000184050 84 ntBASIC1.85□□□□□ -2.11
Atg4bQ8BGE6 Gm27979-201ENSMUST00000185126 56 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 106.1 ms