Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Ubfd1Q78JW9 Gm25457-201ENSMUST00000179509 107 ntBASIC2.74□□□□□ -1.97
Ubfd1Q78JW9 Mir7014-201ENSMUST00000183853 63 ntBASIC2.74□□□□□ -1.97
Ubfd1Q78JW9 Gm28647-201ENSMUST00000188416 197 ntBASIC2.74□□□□□ -1.97
Ubfd1Q78JW9 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.74□□□□□ -1.97
Ubfd1Q78JW9 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Ubfd1Q78JW9 Gm43991-201ENSMUST00000203751 274 ntBASIC2.74□□□□□ -1.97
Ubfd1Q78JW9 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.74□□□□□ -1.97
Ubfd1Q78JW9 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.74□□□□□ -1.97
Ubfd1Q78JW9 AC154390.1-201ENSMUST00000225629 277 ntBASIC2.74□□□□□ -1.97
Ubfd1Q78JW9 Gm6030-201ENSMUST00000078768 402 ntBASIC2.74□□□□□ -1.97
Ubfd1Q78JW9 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Ubfd1Q78JW9 Gm23128-201ENSMUST00000104257 132 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Gm24068-201ENSMUST00000104513 132 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Gm14782-201ENSMUST00000120151 195 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Gm13992-201ENSMUST00000120558 156 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Gm24385-201ENSMUST00000122694 350 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Gm27723-201ENSMUST00000157398 63 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Snord93-201ENSMUST00000175580 71 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Gm22258-201ENSMUST00000177645 94 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Gm25020-201ENSMUST00000178071 107 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Gm26032-201ENSMUST00000178535 94 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Gm25210-201ENSMUST00000178813 94 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Gm25157-201ENSMUST00000178914 94 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Gm22046-201ENSMUST00000179027 94 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Gm22941-201ENSMUST00000179630 94 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Gm25471-201ENSMUST00000180126 94 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Gm25528-201ENSMUST00000180264 132 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Mir7050-201ENSMUST00000184636 60 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Gm23128-202ENSMUST00000196578 133 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Gm44024-201ENSMUST00000203008 476 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Gm2829-201ENSMUST00000213121 499 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 AC145736.2-201ENSMUST00000216305 365 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Gm15102-201ENSMUST00000118740 1502 ntBASIC2.73□□□□□ -1.97
Ubfd1Q78JW9 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.72□□□□□ -1.97
Ubfd1Q78JW9 Gm25526-201ENSMUST00000104332 132 ntBASIC2.72□□□□□ -1.97
Ubfd1Q78JW9 Mir878-201ENSMUST00000104680 78 ntBASIC2.72□□□□□ -1.97
Ubfd1Q78JW9 Gm14803-201ENSMUST00000117163 361 ntBASIC2.72□□□□□ -1.97
Ubfd1Q78JW9 Gm14843-201ENSMUST00000119596 212 ntBASIC2.72□□□□□ -1.97
Ubfd1Q78JW9 Gm11471-201ENSMUST00000121824 198 ntBASIC2.72□□□□□ -1.97
Ubfd1Q78JW9 Gm7592-201ENSMUST00000160674 627 ntBASIC2.72□□□□□ -1.97
Ubfd1Q78JW9 Gm7582-201ENSMUST00000160831 603 ntBASIC2.72□□□□□ -1.97
Ubfd1Q78JW9 Gm29005-201ENSMUST00000186773 320 ntBASIC2.72□□□□□ -1.97
Ubfd1Q78JW9 Gm38060-201ENSMUST00000194822 464 ntBASIC2.72□□□□□ -1.97
Ubfd1Q78JW9 Mir3535-201ENSMUST00000197651 147 ntBASIC2.72□□□□□ -1.97
Ubfd1Q78JW9 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.72□□□□□ -1.97
Ubfd1Q78JW9 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.72□□□□□ -1.97
Ubfd1Q78JW9 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
Ubfd1Q78JW9 Snora23-201ENSMUST00000082517 184 ntBASIC2.72□□□□□ -1.97
Ubfd1Q78JW9 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.72□□□□□ -1.97
Ubfd1Q78JW9 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
Ubfd1Q78JW9 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Ubfd1Q78JW9 Gm9009-201ENSMUST00000117321 326 ntBASIC2.71□□□□□ -1.98
Ubfd1Q78JW9 Gm15002-201ENSMUST00000118406 452 ntBASIC2.71□□□□□ -1.98
Ubfd1Q78JW9 Gm11388-201ENSMUST00000120908 159 ntBASIC2.71□□□□□ -1.98
Ubfd1Q78JW9 Gm25270-201ENSMUST00000122606 138 ntBASIC2.71□□□□□ -1.98
Ubfd1Q78JW9 Gm26277-201ENSMUST00000157097 152 ntBASIC2.71□□□□□ -1.98
Ubfd1Q78JW9 Gm6788-201ENSMUST00000166459 270 ntBASIC2.71□□□□□ -1.98
Ubfd1Q78JW9 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.71□□□□□ -1.98
Ubfd1Q78JW9 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.71□□□□□ -1.98
Ubfd1Q78JW9 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.71□□□□□ -1.98
Ubfd1Q78JW9 Gm24356-201ENSMUST00000082859 106 ntBASIC2.71□□□□□ -1.98
Ubfd1Q78JW9 Gm23451-201ENSMUST00000083328 122 ntBASIC2.71□□□□□ -1.98
Ubfd1Q78JW9 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Ubfd1Q78JW9 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Ubfd1Q78JW9 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.71□□□□□ -1.98
Ubfd1Q78JW9 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Ubfd1Q78JW9 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
Ubfd1Q78JW9 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Ubfd1Q78JW9 Gm25805-201ENSMUST00000122788 108 ntBASIC2.7□□□□□ -1.98
Ubfd1Q78JW9 Gm24291-201ENSMUST00000157633 162 ntBASIC2.7□□□□□ -1.98
Ubfd1Q78JW9 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC2.7□□□□□ -1.98
Ubfd1Q78JW9 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.7□□□□□ -1.98
Ubfd1Q78JW9 Gm22978-201ENSMUST00000082607 160 ntBASIC2.7□□□□□ -1.98
Ubfd1Q78JW9 Gm26458-201ENSMUST00000082832 128 ntBASIC2.7□□□□□ -1.98
Ubfd1Q78JW9 Gm10222-201ENSMUST00000088336 294 ntBASIC2.7□□□□□ -1.98
Ubfd1Q78JW9 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.7□□□□□ -1.98
Ubfd1Q78JW9 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Ubfd1Q78JW9 Mir344c-201ENSMUST00000103919 92 ntBASIC2.69□□□□□ -1.98
Ubfd1Q78JW9 Mir1195-201ENSMUST00000116818 98 ntBASIC2.69□□□□□ -1.98
Ubfd1Q78JW9 Mir1b-201ENSMUST00000117012 122 ntBASIC2.69□□□□□ -1.98
Ubfd1Q78JW9 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.69□□□□□ -1.98
Ubfd1Q78JW9 Gm25153-201ENSMUST00000157118 156 ntBASIC2.69□□□□□ -1.98
Ubfd1Q78JW9 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.69□□□□□ -1.98
Ubfd1Q78JW9 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.69□□□□□ -1.98
Ubfd1Q78JW9 Gm22800-201ENSMUST00000175627 94 ntBASIC2.69□□□□□ -1.98
Ubfd1Q78JW9 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC2.69□□□□□ -1.98
Ubfd1Q78JW9 Gm37763-201ENSMUST00000193445 120 ntBASIC2.69□□□□□ -1.98
Ubfd1Q78JW9 Gm44478-201ENSMUST00000204875 114 ntBASIC2.69□□□□□ -1.98
Ubfd1Q78JW9 AC165092.3-201ENSMUST00000223602 282 ntBASIC2.69□□□□□ -1.98
Ubfd1Q78JW9 Gm26497-201ENSMUST00000083146 107 ntBASIC2.69□□□□□ -1.98
Ubfd1Q78JW9 Gm26265-201ENSMUST00000083277 135 ntBASIC2.69□□□□□ -1.98
Ubfd1Q78JW9 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.69□□□□□ -1.98
Ubfd1Q78JW9 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Ubfd1Q78JW9 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 149.6 ms