Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Gm29134-201ENSMUST00000186579 126 ntBASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Gm28337-201ENSMUST00000190425 666 ntBASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Gm31123-201ENSMUST00000192094 666 ntBASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Ighv2-8-201ENSMUST00000193935 262 ntBASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Gm44336-201ENSMUST00000203696 468 ntBASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Gm45688-201ENSMUST00000210002 101 ntBASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Gm18039-201ENSMUST00000217816 728 ntBASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Mir362-201ENSMUST00000093592 65 ntBASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.42□□□□□ -2.34
Topbp1Q6ZQF0 Gm12044-201ENSMUST00000120335 213 ntBASIC0.42□□□□□ -2.34
Topbp1Q6ZQF0 Gm26349-201ENSMUST00000157530 130 ntBASIC0.42□□□□□ -2.34
Topbp1Q6ZQF0 Gm24366-201ENSMUST00000175383 86 ntBASIC0.42□□□□□ -2.34
Topbp1Q6ZQF0 Gm23419-201ENSMUST00000175523 84 ntBASIC0.42□□□□□ -2.34
Topbp1Q6ZQF0 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Topbp1Q6ZQF0 Gm18356-201ENSMUST00000185677 623 ntBASIC0.42□□□□□ -2.34
Topbp1Q6ZQF0 Gm18160-201ENSMUST00000214279 827 ntBASIC0.42□□□□□ -2.34
Topbp1Q6ZQF0 Gm18774-201ENSMUST00000218269 601 ntBASIC0.42□□□□□ -2.34
Topbp1Q6ZQF0 Gm24494-201ENSMUST00000083804 81 ntBASIC0.42□□□□□ -2.34
Topbp1Q6ZQF0 Gm25008-201ENSMUST00000083809 81 ntBASIC0.42□□□□□ -2.34
Topbp1Q6ZQF0 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC0.42□□□□□ -2.34
Topbp1Q6ZQF0 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.41□□□□□ -2.34
Topbp1Q6ZQF0 Gm26338-201ENSMUST00000102372 110 ntBASIC0.41□□□□□ -2.34
Topbp1Q6ZQF0 Gm14594-201ENSMUST00000118052 537 ntBASIC0.41□□□□□ -2.34
Topbp1Q6ZQF0 Gm14590-201ENSMUST00000118934 537 ntBASIC0.41□□□□□ -2.34
Topbp1Q6ZQF0 Gm14972-201ENSMUST00000121780 364 ntBASIC0.41□□□□□ -2.34
Topbp1Q6ZQF0 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
Topbp1Q6ZQF0 Gm24997-201ENSMUST00000157910 105 ntBASIC0.41□□□□□ -2.34
Topbp1Q6ZQF0 Gm23208-201ENSMUST00000158666 127 ntBASIC0.41□□□□□ -2.34
Topbp1Q6ZQF0 Gm25457-201ENSMUST00000179509 107 ntBASIC0.41□□□□□ -2.34
Topbp1Q6ZQF0 Gm21726-201ENSMUST00000179654 392 ntBASIC0.41□□□□□ -2.34
Topbp1Q6ZQF0 Gm14596-201ENSMUST00000180268 537 ntBASIC0.41□□□□□ -2.34
Topbp1Q6ZQF0 Gm14595-201ENSMUST00000180335 537 ntBASIC0.41□□□□□ -2.34
Topbp1Q6ZQF0 Gm29037-201ENSMUST00000189092 313 ntBASIC0.41□□□□□ -2.34
Topbp1Q6ZQF0 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.41□□□□□ -2.34
Topbp1Q6ZQF0 Mir32-201ENSMUST00000083610 70 ntBASIC0.41□□□□□ -2.34
Topbp1Q6ZQF0 Gm22496-201ENSMUST00000104493 88 ntBASIC0.4□□□□□ -2.35
Topbp1Q6ZQF0 Gm24588-201ENSMUST00000116696 83 ntBASIC0.4□□□□□ -2.35
Topbp1Q6ZQF0 Gm14852-201ENSMUST00000120065 647 ntBASIC0.4□□□□□ -2.35
Topbp1Q6ZQF0 Gm25914-201ENSMUST00000157618 153 ntBASIC0.4□□□□□ -2.35
Topbp1Q6ZQF0 Gm25175-201ENSMUST00000178712 79 ntBASIC0.4□□□□□ -2.35
Topbp1Q6ZQF0 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC0.4□□□□□ -2.35
Topbp1Q6ZQF0 Gm42509-201ENSMUST00000197390 781 ntBASIC0.4□□□□□ -2.35
Topbp1Q6ZQF0 Mir6915-201ENSMUST00000198839 69 ntBASIC0.4□□□□□ -2.35
Topbp1Q6ZQF0 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC0.4□□□□□ -2.35
Topbp1Q6ZQF0 Snord1a-201ENSMUST00000083160 74 ntBASIC0.4□□□□□ -2.35
Topbp1Q6ZQF0 Gm25578-201ENSMUST00000083406 104 ntBASIC0.4□□□□□ -2.35
Topbp1Q6ZQF0 Gm12370-201ENSMUST00000117809 604 ntBASIC0.39□□□□□ -2.35
Topbp1Q6ZQF0 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Topbp1Q6ZQF0 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.39□□□□□ -2.35
Topbp1Q6ZQF0 Gm24903-201ENSMUST00000158131 126 ntBASIC0.39□□□□□ -2.35
Topbp1Q6ZQF0 Gm22522-201ENSMUST00000158271 151 ntBASIC0.39□□□□□ -2.35
Topbp1Q6ZQF0 Gm36956-201ENSMUST00000193830 214 ntBASIC0.39□□□□□ -2.35
Topbp1Q6ZQF0 Gm18729-201ENSMUST00000217230 621 ntBASIC0.39□□□□□ -2.35
Topbp1Q6ZQF0 Gm23691-201ENSMUST00000101878 107 ntBASIC0.38□□□□□ -2.35
Topbp1Q6ZQF0 Gm15365-201ENSMUST00000122392 300 ntBASIC0.38□□□□□ -2.35
Topbp1Q6ZQF0 Gm24598-201ENSMUST00000122510 74 ntBASIC0.38□□□□□ -2.35
Topbp1Q6ZQF0 Gm23854-201ENSMUST00000158378 108 ntBASIC0.38□□□□□ -2.35
Topbp1Q6ZQF0 Gm45878-201ENSMUST00000211839 241 ntBASIC0.38□□□□□ -2.35
Topbp1Q6ZQF0 CT485612.4-201ENSMUST00000223405 250 ntBASIC0.38□□□□□ -2.35
Topbp1Q6ZQF0 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.38□□□□□ -2.35
Topbp1Q6ZQF0 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Topbp1Q6ZQF0 Gm12449-201ENSMUST00000117572 234 ntBASIC0.38□□□□□ -2.35
Topbp1Q6ZQF0 Gm11358-201ENSMUST00000122310 373 ntBASIC0.38□□□□□ -2.35
Topbp1Q6ZQF0 Gm29490-201ENSMUST00000190923 342 ntBASIC0.38□□□□□ -2.35
Topbp1Q6ZQF0 Gm37578-201ENSMUST00000192256 1177 ntBASIC0.38□□□□□ -2.35
Topbp1Q6ZQF0 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC0.38□□□□□ -2.35
Topbp1Q6ZQF0 AC122901.2-201ENSMUST00000216926 285 ntBASIC0.38□□□□□ -2.35
Topbp1Q6ZQF0 AC069561.3-201ENSMUST00000217321 114 ntBASIC0.38□□□□□ -2.35
Topbp1Q6ZQF0 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.38□□□□□ -2.35
Topbp1Q6ZQF0 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.37□□□□□ -2.35
Topbp1Q6ZQF0 Gm22027-201ENSMUST00000122737 127 ntBASIC0.37□□□□□ -2.35
Topbp1Q6ZQF0 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC0.37□□□□□ -2.35
Topbp1Q6ZQF0 Mir1942-201ENSMUST00000157274 63 ntBASIC0.37□□□□□ -2.35
Topbp1Q6ZQF0 Gm24401-201ENSMUST00000157868 91 ntBASIC0.37□□□□□ -2.35
Topbp1Q6ZQF0 Gm23277-201ENSMUST00000157914 136 ntBASIC0.37□□□□□ -2.35
Topbp1Q6ZQF0 Gm20874-201ENSMUST00000178356 663 ntBASIC0.37□□□□□ -2.35
Topbp1Q6ZQF0 Gm44324-201ENSMUST00000198517 135 ntBASIC0.37□□□□□ -2.35
Topbp1Q6ZQF0 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC0.37□□□□□ -2.35
Topbp1Q6ZQF0 Gm24018-201ENSMUST00000083232 107 ntBASIC0.37□□□□□ -2.35
Topbp1Q6ZQF0 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.36□□□□□ -2.35
Topbp1Q6ZQF0 Mir695-201ENSMUST00000102261 109 ntBASIC0.36□□□□□ -2.35
Topbp1Q6ZQF0 Gm14013-201ENSMUST00000119006 270 ntBASIC0.36□□□□□ -2.35
Topbp1Q6ZQF0 Gm23858-201ENSMUST00000158384 106 ntBASIC0.36□□□□□ -2.35
Topbp1Q6ZQF0 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC0.36□□□□□ -2.35
Topbp1Q6ZQF0 Gm23090-201ENSMUST00000177331 78 ntBASIC0.36□□□□□ -2.35
Topbp1Q6ZQF0 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.36□□□□□ -2.35
Topbp1Q6ZQF0 Mir6364-201ENSMUST00000183396 86 ntBASIC0.36□□□□□ -2.35
Topbp1Q6ZQF0 Gm28409-201ENSMUST00000187064 103 ntBASIC0.36□□□□□ -2.35
Topbp1Q6ZQF0 Trbv24-201ENSMUST00000194614 347 ntBASIC0.36□□□□□ -2.35
Topbp1Q6ZQF0 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Topbp1Q6ZQF0 Gm44865-201ENSMUST00000207240 531 ntBASIC0.36□□□□□ -2.35
Topbp1Q6ZQF0 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC0.36□□□□□ -2.35
Topbp1Q6ZQF0 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.36□□□□□ -2.35
Topbp1Q6ZQF0 AC158597.1-201ENSMUST00000216234 150 ntBASIC0.36□□□□□ -2.35
Topbp1Q6ZQF0 AL645546.2-201ENSMUST00000224526 265 ntBASIC0.36□□□□□ -2.35
Topbp1Q6ZQF0 AC154730.1-201ENSMUST00000227874 816 ntBASIC0.36□□□□□ -2.35
Topbp1Q6ZQF0 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Topbp1Q6ZQF0 Gm37096-201ENSMUST00000192317 2058 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms