Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm24275-201ENSMUST00000116780 146 ntBASIC2.88□□□□□ -1.95
Ddx58Q6Q899 Gm23551-201ENSMUST00000116852 121 ntBASIC2.88□□□□□ -1.95
Ddx58Q6Q899 Gm14215-201ENSMUST00000120578 221 ntBASIC2.88□□□□□ -1.95
Ddx58Q6Q899 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.88□□□□□ -1.95
Ddx58Q6Q899 Gm22227-201ENSMUST00000157356 259 ntBASIC2.88□□□□□ -1.95
Ddx58Q6Q899 Gm7592-201ENSMUST00000160674 627 ntBASIC2.88□□□□□ -1.95
Ddx58Q6Q899 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.88□□□□□ -1.95
Ddx58Q6Q899 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.88□□□□□ -1.95
Ddx58Q6Q899 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.88□□□□□ -1.95
Ddx58Q6Q899 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.88□□□□□ -1.95
Ddx58Q6Q899 AC132954.1-201ENSMUST00000221017 342 ntBASIC2.88□□□□□ -1.95
Ddx58Q6Q899 Snord68-201ENSMUST00000082516 86 ntBASIC2.88□□□□□ -1.95
Ddx58Q6Q899 Gm23462-201ENSMUST00000083264 104 ntBASIC2.88□□□□□ -1.95
Ddx58Q6Q899 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Ddx58Q6Q899 Gm22316-201ENSMUST00000158012 216 ntBASIC2.87□□□□□ -1.95
Ddx58Q6Q899 Gm16038-201ENSMUST00000159317 193 ntBASIC2.87□□□□□ -1.95
Ddx58Q6Q899 Gm25020-201ENSMUST00000178071 107 ntBASIC2.87□□□□□ -1.95
Ddx58Q6Q899 Gm43669-201ENSMUST00000198229 436 ntBASIC2.87□□□□□ -1.95
Ddx58Q6Q899 Gm43587-201ENSMUST00000199590 204 ntBASIC2.87□□□□□ -1.95
Ddx58Q6Q899 Mir497-201ENSMUST00000200557 84 ntBASIC2.87□□□□□ -1.95
Ddx58Q6Q899 Gm43914-201ENSMUST00000203592 594 ntBASIC2.87□□□□□ -1.95
Ddx58Q6Q899 Gm44555-201ENSMUST00000209008 148 ntBASIC2.87□□□□□ -1.95
Ddx58Q6Q899 Gm25130-201ENSMUST00000082650 156 ntBASIC2.87□□□□□ -1.95
Ddx58Q6Q899 Gm26265-201ENSMUST00000083277 135 ntBASIC2.87□□□□□ -1.95
Ddx58Q6Q899 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
Ddx58Q6Q899 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.87□□□□□ -1.95
Ddx58Q6Q899 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Ddx58Q6Q899 Mir344e-201ENSMUST00000104677 66 ntBASIC2.86□□□□□ -1.95
Ddx58Q6Q899 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Ddx58Q6Q899 Gm12956-201ENSMUST00000122184 414 ntBASIC2.86□□□□□ -1.95
Ddx58Q6Q899 Gm23867-201ENSMUST00000122649 274 ntBASIC2.86□□□□□ -1.95
Ddx58Q6Q899 Gm2830-201ENSMUST00000140330 385 ntBASIC2.86□□□□□ -1.95
Ddx58Q6Q899 Gm24487-201ENSMUST00000178017 63 ntBASIC2.86□□□□□ -1.95
Ddx58Q6Q899 Gm37404-201ENSMUST00000195726 359 ntBASIC2.86□□□□□ -1.95
Ddx58Q6Q899 Gm44010-201ENSMUST00000204432 331 ntBASIC2.86□□□□□ -1.95
Ddx58Q6Q899 Gm19572-201ENSMUST00000214326 338 ntBASIC2.86□□□□□ -1.95
Ddx58Q6Q899 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.86□□□□□ -1.95
Ddx58Q6Q899 CT025602.1-201ENSMUST00000227281 382 ntBASIC2.86□□□□□ -1.95
Ddx58Q6Q899 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.86□□□□□ -1.95
Ddx58Q6Q899 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Ddx58Q6Q899 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Ddx58Q6Q899 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Ddx58Q6Q899 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Ddx58Q6Q899 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
Ddx58Q6Q899 Gm26500-201ENSMUST00000101867 106 ntBASIC2.85□□□□□ -1.95
Ddx58Q6Q899 Gm24280-201ENSMUST00000104237 134 ntBASIC2.85□□□□□ -1.95
Ddx58Q6Q899 Gm22151-201ENSMUST00000116963 58 ntBASIC2.85□□□□□ -1.95
Ddx58Q6Q899 Gm15010-201ENSMUST00000117153 407 ntBASIC2.85□□□□□ -1.95
Ddx58Q6Q899 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.85□□□□□ -1.95
Ddx58Q6Q899 Gm22491-201ENSMUST00000157190 102 ntBASIC2.85□□□□□ -1.95
Ddx58Q6Q899 Gm25392-201ENSMUST00000157335 297 ntBASIC2.85□□□□□ -1.95
Ddx58Q6Q899 Gm22843-201ENSMUST00000157710 134 ntBASIC2.85□□□□□ -1.95
Ddx58Q6Q899 Gm24726-201ENSMUST00000158232 121 ntBASIC2.85□□□□□ -1.95
Ddx58Q6Q899 Gm22434-201ENSMUST00000158549 122 ntBASIC2.85□□□□□ -1.95
Ddx58Q6Q899 Mir6399-201ENSMUST00000184050 84 ntBASIC2.85□□□□□ -1.95
Ddx58Q6Q899 Gm27753-201ENSMUST00000184742 203 ntBASIC2.85□□□□□ -1.95
Ddx58Q6Q899 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.85□□□□□ -1.95
Ddx58Q6Q899 Gm28995-201ENSMUST00000186625 261 ntBASIC2.85□□□□□ -1.95
Ddx58Q6Q899 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.85□□□□□ -1.95
Ddx58Q6Q899 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.85□□□□□ -1.95
Ddx58Q6Q899 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Ddx58Q6Q899 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
Ddx58Q6Q899 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.84□□□□□ -1.95
Ddx58Q6Q899 Gm14307-201ENSMUST00000118930 291 ntBASIC2.84□□□□□ -1.95
Ddx58Q6Q899 Gm13518-201ENSMUST00000120018 233 ntBASIC2.84□□□□□ -1.95
Ddx58Q6Q899 Gm13729-201ENSMUST00000120328 406 ntBASIC2.84□□□□□ -1.95
Ddx58Q6Q899 Gm14297-201ENSMUST00000129110 291 ntBASIC2.84□□□□□ -1.95
Ddx58Q6Q899 Gm16362-201ENSMUST00000135189 214 ntBASIC2.84□□□□□ -1.95
Ddx58Q6Q899 Gm16358-201ENSMUST00000146046 210 ntBASIC2.84□□□□□ -1.95
Ddx58Q6Q899 Gm23381-201ENSMUST00000157676 94 ntBASIC2.84□□□□□ -1.95
Ddx58Q6Q899 Gm22666-201ENSMUST00000158717 164 ntBASIC2.84□□□□□ -1.95
Ddx58Q6Q899 Gm22664-201ENSMUST00000158719 105 ntBASIC2.84□□□□□ -1.95
Ddx58Q6Q899 Gm16561-201ENSMUST00000163001 192 ntBASIC2.84□□□□□ -1.95
Ddx58Q6Q899 Gm28627-201ENSMUST00000186141 453 ntBASIC2.84□□□□□ -1.95
Ddx58Q6Q899 Gm18991-201ENSMUST00000209225 746 ntBASIC2.84□□□□□ -1.95
Ddx58Q6Q899 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.84□□□□□ -1.95
Ddx58Q6Q899 AC132437.1-201ENSMUST00000218308 320 ntBASIC2.84□□□□□ -1.95
Ddx58Q6Q899 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
Ddx58Q6Q899 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Ddx58Q6Q899 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Ddx58Q6Q899 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.84□□□□□ -1.95
Ddx58Q6Q899 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.84□□□□□ -1.96
Ddx58Q6Q899 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.84□□□□□ -1.96
Ddx58Q6Q899 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
Ddx58Q6Q899 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Ddx58Q6Q899 Gm25485-201ENSMUST00000104120 132 ntBASIC2.83□□□□□ -1.96
Ddx58Q6Q899 Gm24892-201ENSMUST00000122747 104 ntBASIC2.83□□□□□ -1.96
Ddx58Q6Q899 Gm23980-201ENSMUST00000157135 158 ntBASIC2.83□□□□□ -1.96
Ddx58Q6Q899 Mir28b-201ENSMUST00000175399 80 ntBASIC2.83□□□□□ -1.96
Ddx58Q6Q899 Gm25284-201ENSMUST00000180345 141 ntBASIC2.83□□□□□ -1.96
Ddx58Q6Q899 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.83□□□□□ -1.96
Ddx58Q6Q899 Gm28418-201ENSMUST00000186179 423 ntBASIC2.83□□□□□ -1.96
Ddx58Q6Q899 Trbv6-201ENSMUST00000193743 276 ntBASIC2.83□□□□□ -1.96
Ddx58Q6Q899 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.83□□□□□ -1.96
Ddx58Q6Q899 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Ddx58Q6Q899 Gm22062-201ENSMUST00000082563 107 ntBASIC2.83□□□□□ -1.96
Ddx58Q6Q899 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Ddx58Q6Q899 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.83□□□□□ -1.96
Ddx58Q6Q899 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
Ddx58Q6Q899 Gm25094-201ENSMUST00000103992 131 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms