Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm28579-201ENSMUST00000186143 369 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Gm37923-201ENSMUST00000191624 161 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Ighv2-8-201ENSMUST00000193935 262 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Gm44881-201ENSMUST00000205425 367 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Gm24623-201ENSMUST00000082616 194 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Gm23721-201ENSMUST00000083005 107 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Gm23246-201ENSMUST00000083371 67 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Gm26066-201ENSMUST00000083385 109 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 Gm24172-201ENSMUST00000104127 117 ntBASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 Gm11798-201ENSMUST00000119150 421 ntBASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 Gm25625-201ENSMUST00000157221 96 ntBASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 Gm22654-201ENSMUST00000157874 105 ntBASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 Gm25012-201ENSMUST00000158396 164 ntBASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 Gm25488-201ENSMUST00000158728 118 ntBASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 Gm23548-201ENSMUST00000158963 106 ntBASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 Gm25996-201ENSMUST00000175393 117 ntBASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 Mir6406-201ENSMUST00000183592 120 ntBASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 Gm44468-201ENSMUST00000199516 105 ntBASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 Gm45119-201ENSMUST00000207612 199 ntBASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 AC125311.1-201ENSMUST00000226950 220 ntBASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Snrnp40Q6PE01 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.15□□□□□ -2.06
Snrnp40Q6PE01 Gm23472-201ENSMUST00000101806 191 ntBASIC2.15□□□□□ -2.07
Snrnp40Q6PE01 Gm13885-201ENSMUST00000117569 187 ntBASIC2.15□□□□□ -2.07
Snrnp40Q6PE01 Gm12646-201ENSMUST00000119144 238 ntBASIC2.15□□□□□ -2.07
Snrnp40Q6PE01 Gm13862-201ENSMUST00000121220 197 ntBASIC2.15□□□□□ -2.07
Snrnp40Q6PE01 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC2.15□□□□□ -2.07
Snrnp40Q6PE01 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.15□□□□□ -2.07
Snrnp40Q6PE01 Gm14402-201ENSMUST00000122217 508 ntBASIC2.15□□□□□ -2.07
Snrnp40Q6PE01 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC2.15□□□□□ -2.07
Snrnp40Q6PE01 Gm25653-201ENSMUST00000158473 138 ntBASIC2.15□□□□□ -2.07
Snrnp40Q6PE01 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.15□□□□□ -2.07
Snrnp40Q6PE01 Gm24497-201ENSMUST00000177868 191 ntBASIC2.15□□□□□ -2.07
Snrnp40Q6PE01 Gm25939-201ENSMUST00000179876 191 ntBASIC2.15□□□□□ -2.07
Snrnp40Q6PE01 Mir6997-201ENSMUST00000184313 71 ntBASIC2.15□□□□□ -2.07
Snrnp40Q6PE01 Mir497-201ENSMUST00000200557 84 ntBASIC2.15□□□□□ -2.07
Snrnp40Q6PE01 AC161426.1-201ENSMUST00000214137 286 ntBASIC2.15□□□□□ -2.07
Snrnp40Q6PE01 AC132437.1-201ENSMUST00000218308 320 ntBASIC2.15□□□□□ -2.07
Snrnp40Q6PE01 Gm23444-201ENSMUST00000082922 191 ntBASIC2.15□□□□□ -2.07
Snrnp40Q6PE01 Mir496a-201ENSMUST00000093627 79 ntBASIC2.15□□□□□ -2.07
Snrnp40Q6PE01 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.15□□□□□ -2.07
Snrnp40Q6PE01 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
Snrnp40Q6PE01 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.15□□□□□ -2.07
Snrnp40Q6PE01 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 Gm22021-201ENSMUST00000104353 107 ntBASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 Gm13396-201ENSMUST00000120617 271 ntBASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 Gm5396-201ENSMUST00000121222 532 ntBASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 Gm15379-201ENSMUST00000121224 648 ntBASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 Gm24212-201ENSMUST00000158258 132 ntBASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 Gm8292-201ENSMUST00000162574 396 ntBASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 Gm27991-201ENSMUST00000184804 137 ntBASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 Gm28951-201ENSMUST00000190742 313 ntBASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 Gm37313-201ENSMUST00000191673 290 ntBASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 Gm32033-201ENSMUST00000193483 339 ntBASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 Gm44909-201ENSMUST00000208756 165 ntBASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 Gm5023-201ENSMUST00000217442 587 ntBASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 AC116460.1-201ENSMUST00000219040 313 ntBASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 AC163295.1-201ENSMUST00000227840 314 ntBASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 Gm22062-201ENSMUST00000082563 107 ntBASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 Gm23345-201ENSMUST00000083817 150 ntBASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 Gm25937-201ENSMUST00000083912 107 ntBASIC2.14□□□□□ -2.07
Snrnp40Q6PE01 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm23142-201ENSMUST00000101848 105 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm26500-201ENSMUST00000101867 106 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm26240-201ENSMUST00000101893 105 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm12941-201ENSMUST00000117934 220 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm11322-201ENSMUST00000118095 435 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm14980-201ENSMUST00000121247 736 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm22479-201ENSMUST00000122566 81 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm6956-201ENSMUST00000134724 546 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm23230-201ENSMUST00000157298 133 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 1024.9 ms