Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2.18□□□□□ -2.06
Herc4Q6PAV2 Gm43978-201ENSMUST00000203491 451 ntBASIC2.18□□□□□ -2.06
Herc4Q6PAV2 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.18□□□□□ -2.06
Herc4Q6PAV2 Gm45673-201ENSMUST00000210293 358 ntBASIC2.18□□□□□ -2.06
Herc4Q6PAV2 AC161426.1-201ENSMUST00000214137 286 ntBASIC2.18□□□□□ -2.06
Herc4Q6PAV2 AC109212.1-201ENSMUST00000215561 427 ntBASIC2.18□□□□□ -2.06
Herc4Q6PAV2 Gm20102-201ENSMUST00000222445 220 ntBASIC2.18□□□□□ -2.06
Herc4Q6PAV2 AC104832.1-201ENSMUST00000222938 550 ntBASIC2.18□□□□□ -2.06
Herc4Q6PAV2 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.18□□□□□ -2.06
Herc4Q6PAV2 CT025602.1-201ENSMUST00000227281 382 ntBASIC2.18□□□□□ -2.06
Herc4Q6PAV2 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Herc4Q6PAV2 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Herc4Q6PAV2 Gm24037-201ENSMUST00000082871 180 ntBASIC2.18□□□□□ -2.06
Herc4Q6PAV2 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.17□□□□□ -2.06
Herc4Q6PAV2 Gm26077-201ENSMUST00000104064 123 ntBASIC2.17□□□□□ -2.06
Herc4Q6PAV2 Gm26396-201ENSMUST00000104093 132 ntBASIC2.17□□□□□ -2.06
Herc4Q6PAV2 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.17□□□□□ -2.06
Herc4Q6PAV2 Gm12304-201ENSMUST00000120312 385 ntBASIC2.17□□□□□ -2.06
Herc4Q6PAV2 Mup-ps22-201ENSMUST00000121611 243 ntBASIC2.17□□□□□ -2.06
Herc4Q6PAV2 Gm22073-201ENSMUST00000122668 189 ntBASIC2.17□□□□□ -2.06
Herc4Q6PAV2 Gm16328-201ENSMUST00000126985 196 ntBASIC2.17□□□□□ -2.06
Herc4Q6PAV2 Gm23230-201ENSMUST00000157298 133 ntBASIC2.17□□□□□ -2.06
Herc4Q6PAV2 Gm23557-201ENSMUST00000157820 138 ntBASIC2.17□□□□□ -2.06
Herc4Q6PAV2 Gm22535-201ENSMUST00000158174 119 ntBASIC2.17□□□□□ -2.06
Herc4Q6PAV2 Gm23024-201ENSMUST00000158770 292 ntBASIC2.17□□□□□ -2.06
Herc4Q6PAV2 Mir7215-201ENSMUST00000200383 51 ntBASIC2.17□□□□□ -2.06
Herc4Q6PAV2 Gm18453-201ENSMUST00000208000 626 ntBASIC2.17□□□□□ -2.06
Herc4Q6PAV2 Gm45315-201ENSMUST00000209283 333 ntBASIC2.17□□□□□ -2.06
Herc4Q6PAV2 Gm45375-201ENSMUST00000210338 280 ntBASIC2.17□□□□□ -2.06
Herc4Q6PAV2 AC154296.2-201ENSMUST00000214696 545 ntBASIC2.17□□□□□ -2.06
Herc4Q6PAV2 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Herc4Q6PAV2 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.17□□□□□ -2.06
Herc4Q6PAV2 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.17□□□□□ -2.06
Herc4Q6PAV2 AC192333.1-201ENSMUST00000224573 376 ntBASIC2.17□□□□□ -2.06
Herc4Q6PAV2 Gm24623-201ENSMUST00000082616 194 ntBASIC2.17□□□□□ -2.06
Herc4Q6PAV2 Gm23377-201ENSMUST00000082943 126 ntBASIC2.17□□□□□ -2.06
Herc4Q6PAV2 Gm3867-201ENSMUST00000086108 279 ntBASIC2.17□□□□□ -2.06
Herc4Q6PAV2 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Herc4Q6PAV2 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
Herc4Q6PAV2 Gm14574-201ENSMUST00000120644 279 ntBASIC2.16□□□□□ -2.06
Herc4Q6PAV2 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.16□□□□□ -2.06
Herc4Q6PAV2 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.16□□□□□ -2.06
Herc4Q6PAV2 Gm25970-201ENSMUST00000157165 86 ntBASIC2.16□□□□□ -2.06
Herc4Q6PAV2 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Herc4Q6PAV2 Gm25457-201ENSMUST00000179509 107 ntBASIC2.16□□□□□ -2.06
Herc4Q6PAV2 Mir7026-201ENSMUST00000184384 67 ntBASIC2.16□□□□□ -2.06
Herc4Q6PAV2 Gm44182-201ENSMUST00000204052 115 ntBASIC2.16□□□□□ -2.06
Herc4Q6PAV2 Gm44881-201ENSMUST00000205425 367 ntBASIC2.16□□□□□ -2.06
Herc4Q6PAV2 Gm45730-201ENSMUST00000212560 395 ntBASIC2.16□□□□□ -2.06
Herc4Q6PAV2 Gm40810-201ENSMUST00000219149 253 ntBASIC2.16□□□□□ -2.06
Herc4Q6PAV2 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Herc4Q6PAV2 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.16□□□□□ -2.06
Herc4Q6PAV2 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Herc4Q6PAV2 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.16□□□□□ -2.06
Herc4Q6PAV2 Gm23627-201ENSMUST00000082459 107 ntBASIC2.16□□□□□ -2.06
Herc4Q6PAV2 Gm22502-201ENSMUST00000082488 107 ntBASIC2.16□□□□□ -2.06
Herc4Q6PAV2 Gm22977-201ENSMUST00000082615 107 ntBASIC2.16□□□□□ -2.06
Herc4Q6PAV2 Gm24149-201ENSMUST00000082757 107 ntBASIC2.16□□□□□ -2.06
Herc4Q6PAV2 Gm26056-201ENSMUST00000083043 104 ntBASIC2.16□□□□□ -2.06
Herc4Q6PAV2 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.16□□□□□ -2.06
Herc4Q6PAV2 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Herc4Q6PAV2 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.15□□□□□ -2.06
Herc4Q6PAV2 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Herc4Q6PAV2 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Herc4Q6PAV2 Gm24172-201ENSMUST00000104127 117 ntBASIC2.15□□□□□ -2.07
Herc4Q6PAV2 Gm13457-201ENSMUST00000117885 267 ntBASIC2.15□□□□□ -2.07
Herc4Q6PAV2 Gm14215-201ENSMUST00000120578 221 ntBASIC2.15□□□□□ -2.07
Herc4Q6PAV2 Gm14402-201ENSMUST00000122217 508 ntBASIC2.15□□□□□ -2.07
Herc4Q6PAV2 Gm23670-201ENSMUST00000157469 119 ntBASIC2.15□□□□□ -2.07
Herc4Q6PAV2 Gm22654-201ENSMUST00000157874 105 ntBASIC2.15□□□□□ -2.07
Herc4Q6PAV2 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.15□□□□□ -2.07
Herc4Q6PAV2 Gm24388-201ENSMUST00000177872 107 ntBASIC2.15□□□□□ -2.07
Herc4Q6PAV2 Gm27588-201ENSMUST00000185096 263 ntBASIC2.15□□□□□ -2.07
Herc4Q6PAV2 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC2.15□□□□□ -2.07
Herc4Q6PAV2 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC2.15□□□□□ -2.07
Herc4Q6PAV2 Gm25579-201ENSMUST00000083407 106 ntBASIC2.15□□□□□ -2.07
Herc4Q6PAV2 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Herc4Q6PAV2 Gm25377-201ENSMUST00000104334 129 ntBASIC2.14□□□□□ -2.07
Herc4Q6PAV2 Gm12646-201ENSMUST00000119144 238 ntBASIC2.14□□□□□ -2.07
Herc4Q6PAV2 Gm14269-201ENSMUST00000120455 306 ntBASIC2.14□□□□□ -2.07
Herc4Q6PAV2 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC2.14□□□□□ -2.07
Herc4Q6PAV2 Gm25625-201ENSMUST00000157221 96 ntBASIC2.14□□□□□ -2.07
Herc4Q6PAV2 Gm23381-201ENSMUST00000157676 94 ntBASIC2.14□□□□□ -2.07
Herc4Q6PAV2 Gm25012-201ENSMUST00000158396 164 ntBASIC2.14□□□□□ -2.07
Herc4Q6PAV2 Gm20462-201ENSMUST00000172623 408 ntBASIC2.14□□□□□ -2.07
Herc4Q6PAV2 Mir6901-201ENSMUST00000185062 62 ntBASIC2.14□□□□□ -2.07
Herc4Q6PAV2 Mir7217-201ENSMUST00000200304 62 ntBASIC2.14□□□□□ -2.07
Herc4Q6PAV2 AC102369.1-201ENSMUST00000218415 373 ntBASIC2.14□□□□□ -2.07
Herc4Q6PAV2 Gm7240-201ENSMUST00000220769 664 ntBASIC2.14□□□□□ -2.07
Herc4Q6PAV2 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.14□□□□□ -2.07
Herc4Q6PAV2 AC117202.2-201ENSMUST00000226491 1101 ntBASIC2.14□□□□□ -2.07
Herc4Q6PAV2 n-R5s94-201ENSMUST00000082573 119 ntBASIC2.14□□□□□ -2.07
Herc4Q6PAV2 Gm26265-201ENSMUST00000083277 135 ntBASIC2.14□□□□□ -2.07
Herc4Q6PAV2 Gm25124-201ENSMUST00000083345 164 ntBASIC2.14□□□□□ -2.07
Herc4Q6PAV2 Gm26066-201ENSMUST00000083385 109 ntBASIC2.14□□□□□ -2.07
Herc4Q6PAV2 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.14□□□□□ -2.07
Herc4Q6PAV2 Gm25651-201ENSMUST00000083782 119 ntBASIC2.14□□□□□ -2.07
Herc4Q6PAV2 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Herc4Q6PAV2 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Herc4Q6PAV2 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 145.5 ms