Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Gm24461-201ENSMUST00000082735 103 ntBASIC3.37□□□□□ -1.87
Cpsf6Q6NVF9 Mir208a-201ENSMUST00000083498 83 ntBASIC3.37□□□□□ -1.87
Cpsf6Q6NVF9 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Cpsf6Q6NVF9 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.37□□□□□ -1.87
Cpsf6Q6NVF9 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cpsf6Q6NVF9 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cpsf6Q6NVF9 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Cpsf6Q6NVF9 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 Gm25169-201ENSMUST00000104190 129 ntBASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 Gm23592-201ENSMUST00000157859 117 ntBASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 Mir3104-201ENSMUST00000174911 63 ntBASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 Gm23152-201ENSMUST00000175322 116 ntBASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 Gm28030-201ENSMUST00000184987 138 ntBASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 Gm4036-201ENSMUST00000220842 626 ntBASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 Mir346-201ENSMUST00000083547 98 ntBASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 Gm22868-201ENSMUST00000083955 164 ntBASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cpsf6Q6NVF9 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Gm23256-201ENSMUST00000102235 110 ntBASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Gm26140-201ENSMUST00000103807 110 ntBASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Gm11874-201ENSMUST00000117437 130 ntBASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Gm23602-201ENSMUST00000157258 132 ntBASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Gm25060-201ENSMUST00000157374 130 ntBASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Gm27396-201ENSMUST00000157708 58 ntBASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Gm24961-201ENSMUST00000157918 184 ntBASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Gm23666-201ENSMUST00000158053 116 ntBASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Gm23775-201ENSMUST00000158991 249 ntBASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Gm25444-201ENSMUST00000158999 113 ntBASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Gm22908-201ENSMUST00000177620 110 ntBASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Trbv18-201ENSMUST00000194256 294 ntBASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Gm44524-201ENSMUST00000203899 271 ntBASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 AC134601.1-201ENSMUST00000221058 109 ntBASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Gm25800-201ENSMUST00000082636 134 ntBASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Gm22509-201ENSMUST00000082775 107 ntBASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.35□□□□□ -1.87
Cpsf6Q6NVF9 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Gm24582-201ENSMUST00000103967 103 ntBASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Gm12427-201ENSMUST00000117719 302 ntBASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Gm12858-201ENSMUST00000121913 208 ntBASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Gm25105-201ENSMUST00000122477 130 ntBASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Gm22957-201ENSMUST00000122511 123 ntBASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Gm23230-201ENSMUST00000157298 133 ntBASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Gm23535-201ENSMUST00000157542 106 ntBASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Gm23817-201ENSMUST00000158449 104 ntBASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Gm22429-201ENSMUST00000158553 130 ntBASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Gm23182-201ENSMUST00000158688 135 ntBASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Gm22665-201ENSMUST00000158720 275 ntBASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Gm24811-201ENSMUST00000175313 100 ntBASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Gm22108-201ENSMUST00000177961 106 ntBASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Gm24798-201ENSMUST00000179334 106 ntBASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Gm27308-201ENSMUST00000184807 233 ntBASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Gm44355-201ENSMUST00000200417 104 ntBASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Gm43898-201ENSMUST00000204456 424 ntBASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Gm44294-201ENSMUST00000205090 728 ntBASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Mir132-201ENSMUST00000083603 66 ntBASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.87
Cpsf6Q6NVF9 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.34□□□□□ -1.88
Cpsf6Q6NVF9 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Cpsf6Q6NVF9 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.34□□□□□ -1.88
Cpsf6Q6NVF9 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cpsf6Q6NVF9 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.33□□□□□ -1.88
Cpsf6Q6NVF9 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.33□□□□□ -1.88
Cpsf6Q6NVF9 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Cpsf6Q6NVF9 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.33□□□□□ -1.88
Cpsf6Q6NVF9 Gm13167-201ENSMUST00000118554 578 ntBASIC3.33□□□□□ -1.88
Cpsf6Q6NVF9 Gm13314-201ENSMUST00000118742 335 ntBASIC3.33□□□□□ -1.88
Cpsf6Q6NVF9 Gm23957-201ENSMUST00000157209 90 ntBASIC3.33□□□□□ -1.88
Cpsf6Q6NVF9 Gm22192-201ENSMUST00000175128 85 ntBASIC3.33□□□□□ -1.88
Cpsf6Q6NVF9 Gm23053-201ENSMUST00000175136 96 ntBASIC3.33□□□□□ -1.88
Cpsf6Q6NVF9 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cpsf6Q6NVF9 Gm37918-201ENSMUST00000192071 120 ntBASIC3.33□□□□□ -1.88
Cpsf6Q6NVF9 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.33□□□□□ -1.88
Cpsf6Q6NVF9 Gm44932-201ENSMUST00000206799 121 ntBASIC3.33□□□□□ -1.88
Cpsf6Q6NVF9 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC3.33□□□□□ -1.88
Cpsf6Q6NVF9 AC164086.1-201ENSMUST00000221038 289 ntBASIC3.33□□□□□ -1.88
Cpsf6Q6NVF9 AC160962.3-201ENSMUST00000225914 112 ntBASIC3.33□□□□□ -1.88
Cpsf6Q6NVF9 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.33□□□□□ -1.88
Cpsf6Q6NVF9 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms