Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm42925-201ENSMUST00000197359 285 ntBASIC0.01□□□□□ -2.41
Col7a1Q63870 Gm20144-201ENSMUST00000203031 165 ntBASIC0.01□□□□□ -2.41
Col7a1Q63870 AC147240.1-201ENSMUST00000218767 431 ntBASIC0.01□□□□□ -2.41
Col7a1Q63870 AC173482.2-201ENSMUST00000224044 750 ntBASIC0.01□□□□□ -2.41
Col7a1Q63870 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.01□□□□□ -2.41
Col7a1Q63870 AC165106.2-201ENSMUST00000226749 97 ntBASIC0.01□□□□□ -2.41
Col7a1Q63870 Mir429-201ENSMUST00000083493 83 ntBASIC0.01□□□□□ -2.41
Col7a1Q63870 Gm12392-201ENSMUST00000118014 938 ntBASIC0□□□□□ -2.41
Col7a1Q63870 Gm22164-201ENSMUST00000158413 106 ntBASIC0□□□□□ -2.41
Col7a1Q63870 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC0□□□□□ -2.41
Col7a1Q63870 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC0□□□□□ -2.41
Col7a1Q63870 AL929285.1-201ENSMUST00000215522 229 ntBASIC0□□□□□ -2.41
Col7a1Q63870 AC160031.2-201ENSMUST00000218242 274 ntBASIC0□□□□□ -2.41
Col7a1Q63870 Gm8858-201ENSMUST00000118259 342 ntBASIC0□□□□□ -2.41
Col7a1Q63870 Gm25011-201ENSMUST00000158398 126 ntBASIC0□□□□□ -2.41
Col7a1Q63870 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC0□□□□□ -2.41
Col7a1Q63870 Gm21744-201ENSMUST00000178403 662 ntBASIC0□□□□□ -2.41
Col7a1Q63870 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0□□□□□ -2.41
Col7a1Q63870 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
Col7a1Q63870 Mir6342-201ENSMUST00000183870 125 ntBASIC0□□□□□ -2.41
Col7a1Q63870 Gm29950-201ENSMUST00000195273 237 ntBASIC0□□□□□ -2.41
Col7a1Q63870 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC0□□□□□ -2.41
Col7a1Q63870 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC0□□□□□ -2.41
Col7a1Q63870 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC0□□□□□ -2.41
Col7a1Q63870 Gm17911-201ENSMUST00000210806 877 ntBASIC0□□□□□ -2.41
Col7a1Q63870 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC0□□□□□ -2.41
Col7a1Q63870 Gm23407-201ENSMUST00000082538 91 ntBASIC0□□□□□ -2.41
Col7a1Q63870 n-R5s50-201ENSMUST00000083168 111 ntBASIC0□□□□□ -2.41
Col7a1Q63870 Gm25792-201ENSMUST00000083289 100 ntBASIC0□□□□□ -2.41
Col7a1Q63870 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0□□□□□ -2.41
Col7a1Q63870 Gm22368-201ENSMUST00000102416 109 ntBASIC-0□□□□□ -2.41
Col7a1Q63870 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC-0□□□□□ -2.41
Col7a1Q63870 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC-0□□□□□ -2.41
Col7a1Q63870 Gm24282-201ENSMUST00000104232 66 ntBASIC-0□□□□□ -2.41
Col7a1Q63870 Gm26018-201ENSMUST00000104406 128 ntBASIC-0□□□□□ -2.41
Col7a1Q63870 Gm15861-201ENSMUST00000120979 339 ntBASIC-0□□□□□ -2.41
Col7a1Q63870 Gm24060-201ENSMUST00000157494 95 ntBASIC-0□□□□□ -2.41
Col7a1Q63870 Gm22013-201ENSMUST00000158788 103 ntBASIC-0□□□□□ -2.41
Col7a1Q63870 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC-0□□□□□ -2.41
Col7a1Q63870 Gm28597-201ENSMUST00000187664 666 ntBASIC-0□□□□□ -2.41
Col7a1Q63870 Gm43035-201ENSMUST00000197626 517 ntBASIC-0□□□□□ -2.41
Col7a1Q63870 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC-0□□□□□ -2.41
Col7a1Q63870 Gm44338-201ENSMUST00000198614 110 ntBASIC-0□□□□□ -2.41
Col7a1Q63870 Gm43529-201ENSMUST00000199178 412 ntBASIC-0□□□□□ -2.41
Col7a1Q63870 DQ267101-201ENSMUST00000082562 73 ntBASIC-0□□□□□ -2.41
Col7a1Q63870 Gm25851-201ENSMUST00000082794 107 ntBASIC-0□□□□□ -2.41
Col7a1Q63870 Mir145a-201ENSMUST00000083658 70 ntBASIC-0□□□□□ -2.41
Col7a1Q63870 AC125532.1-201ENSMUST00000216210 2334 ntBASIC-0□□□□□ -2.41
Col7a1Q63870 Gm14795-201ENSMUST00000118461 471 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 Gm14785-201ENSMUST00000120185 539 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC-0.01□□□□□ -2.41
Col7a1Q63870 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 Gm16539-201ENSMUST00000160086 327 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 Gm27420-201ENSMUST00000183823 79 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 Gm28755-201ENSMUST00000185773 199 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC-0.01□□□□□ -2.41
Col7a1Q63870 AC170810.3-201ENSMUST00000226177 374 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 AC166344.2-201ENSMUST00000226747 374 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 AC156574.2-201ENSMUST00000228023 282 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Col7a1Q63870 Gm23932-201ENSMUST00000082914 107 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 Gm23246-201ENSMUST00000083371 67 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 Gm25876-201ENSMUST00000104329 119 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 Gm14945-201ENSMUST00000119556 1118 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 Gm25557-201ENSMUST00000158084 315 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC-0.01□□□□□ -2.41
Col7a1Q63870 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 Mir6388-201ENSMUST00000184417 75 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC-0.01□□□□□ -2.41
Col7a1Q63870 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC-0.01□□□□□ -2.41
Col7a1Q63870 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
Col7a1Q63870 AC134334.1-201ENSMUST00000214277 255 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 AC125531.1-201ENSMUST00000219849 221 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 CT572985.2-201ENSMUST00000220496 211 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 AC154262.1-201ENSMUST00000225976 286 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
Col7a1Q63870 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
Col7a1Q63870 Gm22829-201ENSMUST00000083771 106 ntBASIC-0.01□□□□□ -2.41
Col7a1Q63870 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC-0.02□□□□□ -2.41
Col7a1Q63870 Mir28b-201ENSMUST00000175399 80 ntBASIC-0.02□□□□□ -2.41
Col7a1Q63870 Gm22566-201ENSMUST00000175541 85 ntBASIC-0.02□□□□□ -2.41
Col7a1Q63870 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC-0.02□□□□□ -2.41
Col7a1Q63870 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
Col7a1Q63870 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
Col7a1Q63870 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC-0.02□□□□□ -2.41
Col7a1Q63870 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC-0.02□□□□□ -2.41
Col7a1Q63870 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC-0.02□□□□□ -2.41
Col7a1Q63870 Gm46193-201ENSMUST00000219399 364 ntBASIC-0.02□□□□□ -2.41
Col7a1Q63870 AC167229.1-201ENSMUST00000220057 469 ntBASIC-0.02□□□□□ -2.41
Col7a1Q63870 Gm45965-201ENSMUST00000221192 1284 ntBASIC-0.02□□□□□ -2.41
Col7a1Q63870 AC126691.1-201ENSMUST00000226534 202 ntBASIC-0.02□□□□□ -2.41
Col7a1Q63870 Gm23727-201ENSMUST00000083352 164 ntBASIC-0.02□□□□□ -2.41
Col7a1Q63870 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
Col7a1Q63870 Gm13885-201ENSMUST00000117569 187 ntBASIC-0.02□□□□□ -2.41
Col7a1Q63870 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.02□□□□□ -2.41
Col7a1Q63870 Gm25332-201ENSMUST00000158038 105 ntBASIC-0.02□□□□□ -2.41
Col7a1Q63870 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.02□□□□□ -2.41
Col7a1Q63870 Snord8-201ENSMUST00000175303 110 ntBASIC-0.02□□□□□ -2.41
Col7a1Q63870 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC-0.02□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms