Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.05□□□□□ -2.08
Six1Q62231 Gm24582-201ENSMUST00000103967 103 ntBASIC2.04□□□□□ -2.08
Six1Q62231 Mir669d-201ENSMUST00000104644 121 ntBASIC2.04□□□□□ -2.08
Six1Q62231 Gm14678-201ENSMUST00000121396 482 ntBASIC2.04□□□□□ -2.08
Six1Q62231 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2.04□□□□□ -2.08
Six1Q62231 Gm22382-201ENSMUST00000158185 130 ntBASIC2.04□□□□□ -2.08
Six1Q62231 Gm22434-201ENSMUST00000158549 122 ntBASIC2.04□□□□□ -2.08
Six1Q62231 Gm25488-201ENSMUST00000158728 118 ntBASIC2.04□□□□□ -2.08
Six1Q62231 Gm22527-201ENSMUST00000158816 106 ntBASIC2.04□□□□□ -2.08
Six1Q62231 Gm20462-201ENSMUST00000172623 408 ntBASIC2.04□□□□□ -2.08
Six1Q62231 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Six1Q62231 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.04□□□□□ -2.08
Six1Q62231 Gm28016-201ENSMUST00000184594 196 ntBASIC2.04□□□□□ -2.08
Six1Q62231 Gm28418-201ENSMUST00000186179 423 ntBASIC2.04□□□□□ -2.08
Six1Q62231 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.04□□□□□ -2.08
Six1Q62231 Gm19777-201ENSMUST00000191940 358 ntBASIC2.04□□□□□ -2.08
Six1Q62231 Trav15d-3-201ENSMUST00000198604 167 ntBASIC2.04□□□□□ -2.08
Six1Q62231 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Six1Q62231 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.04□□□□□ -2.08
Six1Q62231 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.04□□□□□ -2.08
Six1Q62231 Gm25130-201ENSMUST00000082650 156 ntBASIC2.04□□□□□ -2.08
Six1Q62231 Gm25199-201ENSMUST00000083095 104 ntBASIC2.04□□□□□ -2.08
Six1Q62231 Gm23249-201ENSMUST00000083369 161 ntBASIC2.04□□□□□ -2.08
Six1Q62231 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.03□□□□□ -2.08
Six1Q62231 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.03□□□□□ -2.08
Six1Q62231 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.03□□□□□ -2.08
Six1Q62231 Gm15211-201ENSMUST00000118932 528 ntBASIC2.03□□□□□ -2.08
Six1Q62231 Gm13518-201ENSMUST00000120018 233 ntBASIC2.03□□□□□ -2.08
Six1Q62231 Gm16328-201ENSMUST00000126985 196 ntBASIC2.03□□□□□ -2.08
Six1Q62231 Gm23331-201ENSMUST00000157423 108 ntBASIC2.03□□□□□ -2.08
Six1Q62231 Gm24005-201ENSMUST00000158459 296 ntBASIC2.03□□□□□ -2.08
Six1Q62231 Gm28647-201ENSMUST00000188416 197 ntBASIC2.03□□□□□ -2.08
Six1Q62231 Gm28717-201ENSMUST00000189950 315 ntBASIC2.03□□□□□ -2.08
Six1Q62231 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.03□□□□□ -2.08
Six1Q62231 Gm37404-201ENSMUST00000195726 359 ntBASIC2.03□□□□□ -2.08
Six1Q62231 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.03□□□□□ -2.08
Six1Q62231 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.03□□□□□ -2.08
Six1Q62231 Gm23453-201ENSMUST00000083326 106 ntBASIC2.03□□□□□ -2.08
Six1Q62231 Mir30d-201ENSMUST00000083503 82 ntBASIC2.03□□□□□ -2.08
Six1Q62231 Gm23345-201ENSMUST00000083817 150 ntBASIC2.03□□□□□ -2.08
Six1Q62231 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Six1Q62231 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.03□□□□□ -2.09
Six1Q62231 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Six1Q62231 Gm24282-201ENSMUST00000104232 66 ntBASIC2.02□□□□□ -2.09
Six1Q62231 Mir344e-201ENSMUST00000104677 66 ntBASIC2.02□□□□□ -2.09
Six1Q62231 Mir669i-201ENSMUST00000117007 127 ntBASIC2.02□□□□□ -2.09
Six1Q62231 Gm14402-201ENSMUST00000122217 508 ntBASIC2.02□□□□□ -2.09
Six1Q62231 Gm23120-201ENSMUST00000157654 287 ntBASIC2.02□□□□□ -2.09
Six1Q62231 Gm22727-201ENSMUST00000158090 116 ntBASIC2.02□□□□□ -2.09
Six1Q62231 Gm9830-201ENSMUST00000178509 357 ntBASIC2.02□□□□□ -2.09
Six1Q62231 Gm25284-201ENSMUST00000180345 141 ntBASIC2.02□□□□□ -2.09
Six1Q62231 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.02□□□□□ -2.09
Six1Q62231 Gm37923-201ENSMUST00000191624 161 ntBASIC2.02□□□□□ -2.09
Six1Q62231 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.02□□□□□ -2.09
Six1Q62231 Gm43193-201ENSMUST00000197732 441 ntBASIC2.02□□□□□ -2.09
Six1Q62231 Mir3068-202ENSMUST00000197755 79 ntBASIC2.02□□□□□ -2.09
Six1Q62231 Gm44468-201ENSMUST00000199516 105 ntBASIC2.02□□□□□ -2.09
Six1Q62231 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.02□□□□□ -2.09
Six1Q62231 Gm8940-201ENSMUST00000212585 219 ntBASIC2.02□□□□□ -2.09
Six1Q62231 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.02□□□□□ -2.09
Six1Q62231 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.02□□□□□ -2.09
Six1Q62231 Gm40810-201ENSMUST00000219149 253 ntBASIC2.02□□□□□ -2.09
Six1Q62231 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Six1Q62231 Gm25896-201ENSMUST00000083713 136 ntBASIC2.02□□□□□ -2.09
Six1Q62231 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.02□□□□□ -2.09
Six1Q62231 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.02□□□□□ -2.09
Six1Q62231 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.01□□□□□ -2.09
Six1Q62231 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.01□□□□□ -2.09
Six1Q62231 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.01□□□□□ -2.09
Six1Q62231 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
Six1Q62231 Gm22494-201ENSMUST00000104495 128 ntBASIC2.01□□□□□ -2.09
Six1Q62231 Gm12513-201ENSMUST00000118617 352 ntBASIC2.01□□□□□ -2.09
Six1Q62231 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.01□□□□□ -2.09
Six1Q62231 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Six1Q62231 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Six1Q62231 Gm22843-201ENSMUST00000157710 134 ntBASIC2.01□□□□□ -2.09
Six1Q62231 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.01□□□□□ -2.09
Six1Q62231 Gm23813-201ENSMUST00000175153 77 ntBASIC2.01□□□□□ -2.09
Six1Q62231 Gm22264-201ENSMUST00000178200 107 ntBASIC2.01□□□□□ -2.09
Six1Q62231 Gm27640-201ENSMUST00000184580 147 ntBASIC2.01□□□□□ -2.09
Six1Q62231 Gm29397-201ENSMUST00000185205 333 ntBASIC2.01□□□□□ -2.09
Six1Q62231 Gm28627-201ENSMUST00000186141 453 ntBASIC2.01□□□□□ -2.09
Six1Q62231 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.01□□□□□ -2.09
Six1Q62231 AC166341.3-201ENSMUST00000221861 114 ntBASIC2.01□□□□□ -2.09
Six1Q62231 Snord68-201ENSMUST00000082516 86 ntBASIC2.01□□□□□ -2.09
Six1Q62231 Gm25813-201ENSMUST00000082748 191 ntBASIC2.01□□□□□ -2.09
Six1Q62231 Gm23041-201ENSMUST00000083868 106 ntBASIC2.01□□□□□ -2.09
Six1Q62231 Gm25937-201ENSMUST00000083912 107 ntBASIC2.01□□□□□ -2.09
Six1Q62231 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.01□□□□□ -2.09
Six1Q62231 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.01□□□□□ -2.09
Six1Q62231 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.01□□□□□ -2.09
Six1Q62231 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.01□□□□□ -2.09
Six1Q62231 Gm24098-201ENSMUST00000102075 109 ntBASIC2□□□□□ -2.09
Six1Q62231 Gm25381-201ENSMUST00000102078 109 ntBASIC2□□□□□ -2.09
Six1Q62231 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2□□□□□ -2.09
Six1Q62231 Gm25094-201ENSMUST00000103992 131 ntBASIC2□□□□□ -2.09
Six1Q62231 Gm23202-201ENSMUST00000104376 129 ntBASIC2□□□□□ -2.09
Six1Q62231 Gm24984-201ENSMUST00000104454 133 ntBASIC2□□□□□ -2.09
Six1Q62231 Gm14602-201ENSMUST00000118625 340 ntBASIC2□□□□□ -2.09
Six1Q62231 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms