Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.86□□□□□ -1.95
Ift88Q61371 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.86□□□□□ -1.95
Ift88Q61371 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.86□□□□□ -1.95
Ift88Q61371 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.86□□□□□ -1.95
Ift88Q61371 Gm26497-201ENSMUST00000083146 107 ntBASIC2.86□□□□□ -1.95
Ift88Q61371 Gm23462-201ENSMUST00000083264 104 ntBASIC2.86□□□□□ -1.95
Ift88Q61371 Gm23040-201ENSMUST00000083869 163 ntBASIC2.86□□□□□ -1.95
Ift88Q61371 Gm10222-201ENSMUST00000088336 294 ntBASIC2.86□□□□□ -1.95
Ift88Q61371 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.86□□□□□ -1.95
Ift88Q61371 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Ift88Q61371 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
Ift88Q61371 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Ift88Q61371 Gm14803-201ENSMUST00000117163 361 ntBASIC2.85□□□□□ -1.95
Ift88Q61371 Gm5396-201ENSMUST00000121222 532 ntBASIC2.85□□□□□ -1.95
Ift88Q61371 Gm14845-201ENSMUST00000121259 306 ntBASIC2.85□□□□□ -1.95
Ift88Q61371 Gm14564-201ENSMUST00000122159 294 ntBASIC2.85□□□□□ -1.95
Ift88Q61371 Gm14770-201ENSMUST00000122197 312 ntBASIC2.85□□□□□ -1.95
Ift88Q61371 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.85□□□□□ -1.95
Ift88Q61371 Gm23600-201ENSMUST00000157260 71 ntBASIC2.85□□□□□ -1.95
Ift88Q61371 Gm20660-201ENSMUST00000177515 289 ntBASIC2.85□□□□□ -1.95
Ift88Q61371 Gm24388-201ENSMUST00000177872 107 ntBASIC2.85□□□□□ -1.95
Ift88Q61371 Mir6399-201ENSMUST00000184050 84 ntBASIC2.85□□□□□ -1.95
Ift88Q61371 Mir7047-201ENSMUST00000184595 64 ntBASIC2.85□□□□□ -1.95
Ift88Q61371 Gm27747-201ENSMUST00000184707 85 ntBASIC2.85□□□□□ -1.95
Ift88Q61371 Gm29658-201ENSMUST00000185404 230 ntBASIC2.85□□□□□ -1.95
Ift88Q61371 Gm44429-201ENSMUST00000203542 186 ntBASIC2.85□□□□□ -1.95
Ift88Q61371 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.85□□□□□ -1.95
Ift88Q61371 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.85□□□□□ -1.95
Ift88Q61371 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Ift88Q61371 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Ift88Q61371 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
Ift88Q61371 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.85□□□□□ -1.95
Ift88Q61371 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.84□□□□□ -1.95
Ift88Q61371 Gm13714-201ENSMUST00000117313 221 ntBASIC2.84□□□□□ -1.95
Ift88Q61371 Gm12513-201ENSMUST00000118617 352 ntBASIC2.84□□□□□ -1.95
Ift88Q61371 Gm11414-201ENSMUST00000121795 263 ntBASIC2.84□□□□□ -1.95
Ift88Q61371 Gm25020-201ENSMUST00000178071 107 ntBASIC2.84□□□□□ -1.95
Ift88Q61371 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.84□□□□□ -1.95
Ift88Q61371 AL606472.1-201ENSMUST00000224628 275 ntBASIC2.84□□□□□ -1.95
Ift88Q61371 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Ift88Q61371 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Ift88Q61371 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Ift88Q61371 Gm15102-201ENSMUST00000118740 1502 ntBASIC2.83□□□□□ -1.96
Ift88Q61371 Gm6071-201ENSMUST00000119561 440 ntBASIC2.83□□□□□ -1.96
Ift88Q61371 Gm14792-201ENSMUST00000119725 258 ntBASIC2.83□□□□□ -1.96
Ift88Q61371 Gm25625-201ENSMUST00000157221 96 ntBASIC2.83□□□□□ -1.96
Ift88Q61371 Gm23223-201ENSMUST00000158119 127 ntBASIC2.83□□□□□ -1.96
Ift88Q61371 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.83□□□□□ -1.96
Ift88Q61371 Gm25457-201ENSMUST00000179509 107 ntBASIC2.83□□□□□ -1.96
Ift88Q61371 Gm27761-201ENSMUST00000184091 131 ntBASIC2.83□□□□□ -1.96
Ift88Q61371 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.83□□□□□ -1.96
Ift88Q61371 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC2.83□□□□□ -1.96
Ift88Q61371 AL929417.1-201ENSMUST00000214901 124 ntBASIC2.83□□□□□ -1.96
Ift88Q61371 AC167140.1-201ENSMUST00000224710 403 ntBASIC2.83□□□□□ -1.96
Ift88Q61371 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.83□□□□□ -1.96
Ift88Q61371 CT010454.1-201ENSMUST00000225975 265 ntBASIC2.83□□□□□ -1.96
Ift88Q61371 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Ift88Q61371 Gm22978-201ENSMUST00000082607 160 ntBASIC2.83□□□□□ -1.96
Ift88Q61371 AF357428-201ENSMUST00000083815 69 ntBASIC2.83□□□□□ -1.96
Ift88Q61371 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Ift88Q61371 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
Ift88Q61371 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Ift88Q61371 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Ift88Q61371 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Ift88Q61371 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Ift88Q61371 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Ift88Q61371 Gm24374-201ENSMUST00000104394 106 ntBASIC2.82□□□□□ -1.96
Ift88Q61371 Gm15526-201ENSMUST00000112504 204 ntBASIC2.82□□□□□ -1.96
Ift88Q61371 Mir1b-201ENSMUST00000117012 122 ntBASIC2.82□□□□□ -1.96
Ift88Q61371 Gm6954-201ENSMUST00000117416 225 ntBASIC2.82□□□□□ -1.96
Ift88Q61371 Gm25805-201ENSMUST00000122788 108 ntBASIC2.82□□□□□ -1.96
Ift88Q61371 Gm37763-201ENSMUST00000193445 120 ntBASIC2.82□□□□□ -1.96
Ift88Q61371 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Ift88Q61371 Mir376a-201ENSMUST00000197584 68 ntBASIC2.82□□□□□ -1.96
Ift88Q61371 Gm43217-201ENSMUST00000199513 367 ntBASIC2.82□□□□□ -1.96
Ift88Q61371 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Ift88Q61371 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC2.82□□□□□ -1.96
Ift88Q61371 Gm2829-201ENSMUST00000213121 499 ntBASIC2.82□□□□□ -1.96
Ift88Q61371 Gm23615-201ENSMUST00000082602 65 ntBASIC2.82□□□□□ -1.96
Ift88Q61371 Gm24356-201ENSMUST00000082859 106 ntBASIC2.82□□□□□ -1.96
Ift88Q61371 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Ift88Q61371 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Ift88Q61371 Gm25539-201ENSMUST00000116886 122 ntBASIC2.81□□□□□ -1.96
Ift88Q61371 Gm14973-201ENSMUST00000117248 255 ntBASIC2.81□□□□□ -1.96
Ift88Q61371 Gm22792-201ENSMUST00000157225 133 ntBASIC2.81□□□□□ -1.96
Ift88Q61371 Gm24909-201ENSMUST00000157290 280 ntBASIC2.81□□□□□ -1.96
Ift88Q61371 Gm25643-201ENSMUST00000158874 103 ntBASIC2.81□□□□□ -1.96
Ift88Q61371 Gm23268-201ENSMUST00000175494 78 ntBASIC2.81□□□□□ -1.96
Ift88Q61371 Gm29005-201ENSMUST00000186773 320 ntBASIC2.81□□□□□ -1.96
Ift88Q61371 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.81□□□□□ -1.96
Ift88Q61371 Mir7116-201ENSMUST00000195956 70 ntBASIC2.81□□□□□ -1.96
Ift88Q61371 Igkv15-102-201ENSMUST00000197885 287 ntBASIC2.81□□□□□ -1.96
Ift88Q61371 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.81□□□□□ -1.96
Ift88Q61371 Gm34314-201ENSMUST00000203622 367 ntBASIC2.81□□□□□ -1.96
Ift88Q61371 Gm44600-201ENSMUST00000208540 111 ntBASIC2.81□□□□□ -1.96
Ift88Q61371 Gm29818-201ENSMUST00000218070 165 ntBASIC2.81□□□□□ -1.96
Ift88Q61371 AC160115.1-201ENSMUST00000224678 1574 ntBASIC2.81□□□□□ -1.96
Ift88Q61371 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Ift88Q61371 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ift88Q61371 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms