Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CtcfQ61164 Gm23615-201ENSMUST00000082602 65 ntBASIC2.85□□□□□ -1.95
CtcfQ61164 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.85□□□□□ -1.95
CtcfQ61164 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CtcfQ61164 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.85□□□□□ -1.95
CtcfQ61164 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CtcfQ61164 Gm15846-201ENSMUST00000116022 320 ntBASIC2.84□□□□□ -1.95
CtcfQ61164 Gm26473-201ENSMUST00000116763 127 ntBASIC2.84□□□□□ -1.95
CtcfQ61164 Gm15029-201ENSMUST00000119742 199 ntBASIC2.84□□□□□ -1.95
CtcfQ61164 Gm12815-201ENSMUST00000121737 135 ntBASIC2.84□□□□□ -1.95
CtcfQ61164 Gm15213-201ENSMUST00000122098 216 ntBASIC2.84□□□□□ -1.95
CtcfQ61164 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC2.84□□□□□ -1.95
CtcfQ61164 Gm24501-201ENSMUST00000158452 62 ntBASIC2.84□□□□□ -1.95
CtcfQ61164 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CtcfQ61164 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.84□□□□□ -1.95
CtcfQ61164 Gm27997-201ENSMUST00000184942 69 ntBASIC2.84□□□□□ -1.95
CtcfQ61164 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.84□□□□□ -1.95
CtcfQ61164 Gm20257-202ENSMUST00000188643 130 ntBASIC2.84□□□□□ -1.95
CtcfQ61164 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.84□□□□□ -1.95
CtcfQ61164 Gm9402-201ENSMUST00000196849 388 ntBASIC2.84□□□□□ -1.95
CtcfQ61164 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.84□□□□□ -1.95
CtcfQ61164 Gm6030-201ENSMUST00000078768 402 ntBASIC2.84□□□□□ -1.95
CtcfQ61164 Gm23247-201ENSMUST00000083373 107 ntBASIC2.84□□□□□ -1.95
CtcfQ61164 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.84□□□□□ -1.95
CtcfQ61164 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CtcfQ61164 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CtcfQ61164 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
CtcfQ61164 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.83□□□□□ -1.96
CtcfQ61164 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
CtcfQ61164 Gm23011-201ENSMUST00000104148 132 ntBASIC2.83□□□□□ -1.96
CtcfQ61164 Gm23956-201ENSMUST00000157211 119 ntBASIC2.83□□□□□ -1.96
CtcfQ61164 Gm26411-201ENSMUST00000157668 107 ntBASIC2.83□□□□□ -1.96
CtcfQ61164 Gm24056-201ENSMUST00000158617 146 ntBASIC2.83□□□□□ -1.96
CtcfQ61164 Gm22527-201ENSMUST00000158816 106 ntBASIC2.83□□□□□ -1.96
CtcfQ61164 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.83□□□□□ -1.96
CtcfQ61164 Gm23864-201ENSMUST00000177607 107 ntBASIC2.83□□□□□ -1.96
CtcfQ61164 Gm27747-201ENSMUST00000184707 85 ntBASIC2.83□□□□□ -1.96
CtcfQ61164 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC2.83□□□□□ -1.96
CtcfQ61164 Gm37746-201ENSMUST00000193249 198 ntBASIC2.83□□□□□ -1.96
CtcfQ61164 Gm32175-201ENSMUST00000193641 346 ntBASIC2.83□□□□□ -1.96
CtcfQ61164 Gm37801-201ENSMUST00000194754 274 ntBASIC2.83□□□□□ -1.96
CtcfQ61164 Gm43626-201ENSMUST00000198575 162 ntBASIC2.83□□□□□ -1.96
CtcfQ61164 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.83□□□□□ -1.96
CtcfQ61164 Gm44844-201ENSMUST00000207242 336 ntBASIC2.83□□□□□ -1.96
CtcfQ61164 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.83□□□□□ -1.96
CtcfQ61164 AC165157.3-201ENSMUST00000220815 103 ntBASIC2.83□□□□□ -1.96
CtcfQ61164 Gm23042-201ENSMUST00000083866 101 ntBASIC2.83□□□□□ -1.96
CtcfQ61164 Gm26329-201ENSMUST00000093723 110 ntBASIC2.83□□□□□ -1.96
CtcfQ61164 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CtcfQ61164 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CtcfQ61164 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CtcfQ61164 Gm14774-201ENSMUST00000117857 536 ntBASIC2.82□□□□□ -1.96
CtcfQ61164 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC2.82□□□□□ -1.96
CtcfQ61164 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.82□□□□□ -1.96
CtcfQ61164 Gm24481-201ENSMUST00000157210 102 ntBASIC2.82□□□□□ -1.96
CtcfQ61164 Gm22551-201ENSMUST00000157795 103 ntBASIC2.82□□□□□ -1.96
CtcfQ61164 Gm23759-201ENSMUST00000158351 268 ntBASIC2.82□□□□□ -1.96
CtcfQ61164 Gm5224-201ENSMUST00000183060 350 ntBASIC2.82□□□□□ -1.96
CtcfQ61164 Mir7242-201ENSMUST00000183710 79 ntBASIC2.82□□□□□ -1.96
CtcfQ61164 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CtcfQ61164 Gm42672-201ENSMUST00000197821 352 ntBASIC2.82□□□□□ -1.96
CtcfQ61164 Igkv15-102-201ENSMUST00000197885 287 ntBASIC2.82□□□□□ -1.96
CtcfQ61164 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.82□□□□□ -1.96
CtcfQ61164 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.82□□□□□ -1.96
CtcfQ61164 Gm7065-201ENSMUST00000222150 474 ntBASIC2.82□□□□□ -1.96
CtcfQ61164 mt-Ti-201ENSMUST00000082393 69 ntBASIC2.82□□□□□ -1.96
CtcfQ61164 Gm22806-201ENSMUST00000082738 136 ntBASIC2.82□□□□□ -1.96
CtcfQ61164 Mir410-201ENSMUST00000083563 81 ntBASIC2.82□□□□□ -1.96
CtcfQ61164 Gm22353-201ENSMUST00000083918 136 ntBASIC2.82□□□□□ -1.96
CtcfQ61164 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.82□□□□□ -1.96
CtcfQ61164 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CtcfQ61164 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.82□□□□□ -1.96
CtcfQ61164 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
CtcfQ61164 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CtcfQ61164 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.81□□□□□ -1.96
CtcfQ61164 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
CtcfQ61164 Gm24670-201ENSMUST00000104154 132 ntBASIC2.81□□□□□ -1.96
CtcfQ61164 Gm15183-201ENSMUST00000118933 348 ntBASIC2.81□□□□□ -1.96
CtcfQ61164 Gm23184-201ENSMUST00000122594 131 ntBASIC2.81□□□□□ -1.96
CtcfQ61164 Gm24909-201ENSMUST00000157290 280 ntBASIC2.81□□□□□ -1.96
CtcfQ61164 Gm23829-201ENSMUST00000157392 270 ntBASIC2.81□□□□□ -1.96
CtcfQ61164 Gm22814-201ENSMUST00000157452 104 ntBASIC2.81□□□□□ -1.96
CtcfQ61164 Gm23545-201ENSMUST00000158205 104 ntBASIC2.81□□□□□ -1.96
CtcfQ61164 Gm38238-201ENSMUST00000194334 346 ntBASIC2.81□□□□□ -1.96
CtcfQ61164 Gm45879-201ENSMUST00000212521 392 ntBASIC2.81□□□□□ -1.96
CtcfQ61164 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.81□□□□□ -1.96
CtcfQ61164 AC173482.4-201ENSMUST00000225096 348 ntBASIC2.81□□□□□ -1.96
CtcfQ61164 Gm24316-201ENSMUST00000083041 107 ntBASIC2.81□□□□□ -1.96
CtcfQ61164 Gm22169-201ENSMUST00000083229 107 ntBASIC2.81□□□□□ -1.96
CtcfQ61164 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.81□□□□□ -1.96
CtcfQ61164 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CtcfQ61164 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.8□□□□□ -1.96
CtcfQ61164 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
CtcfQ61164 n-R5s87-201ENSMUST00000122752 116 ntBASIC2.8□□□□□ -1.96
CtcfQ61164 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.8□□□□□ -1.96
CtcfQ61164 Gm24958-201ENSMUST00000158009 97 ntBASIC2.8□□□□□ -1.96
CtcfQ61164 Gm25939-201ENSMUST00000179876 191 ntBASIC2.8□□□□□ -1.96
CtcfQ61164 Gm27532-201ENSMUST00000183726 113 ntBASIC2.8□□□□□ -1.96
CtcfQ61164 Gm43529-201ENSMUST00000199178 412 ntBASIC2.8□□□□□ -1.96
CtcfQ61164 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC2.8□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms