Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm20613-201ENSMUST00000175828 345 ntBASIC1.5□□□□□ -2.17
Nr1h4Q60641 Gm27013-201ENSMUST00000182441 1024 ntBASIC1.5□□□□□ -2.17
Nr1h4Q60641 Gm27385-201ENSMUST00000184747 104 ntBASIC1.5□□□□□ -2.17
Nr1h4Q60641 Gm27624-201ENSMUST00000185047 177 ntBASIC1.5□□□□□ -2.17
Nr1h4Q60641 Gm27959-201ENSMUST00000185172 111 ntBASIC1.5□□□□□ -2.17
Nr1h4Q60641 Gm28597-201ENSMUST00000187664 666 ntBASIC1.5□□□□□ -2.17
Nr1h4Q60641 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Nr1h4Q60641 Gm43739-201ENSMUST00000198294 307 ntBASIC1.5□□□□□ -2.17
Nr1h4Q60641 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.5□□□□□ -2.17
Nr1h4Q60641 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.5□□□□□ -2.17
Nr1h4Q60641 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.5□□□□□ -2.17
Nr1h4Q60641 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Nr1h4Q60641 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.5□□□□□ -2.17
Nr1h4Q60641 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.5□□□□□ -2.17
Nr1h4Q60641 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.5□□□□□ -2.17
Nr1h4Q60641 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.49□□□□□ -2.17
Nr1h4Q60641 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.49□□□□□ -2.17
Nr1h4Q60641 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Nr1h4Q60641 Gm17132-201ENSMUST00000109542 1158 ntBASIC1.49□□□□□ -2.17
Nr1h4Q60641 Gm15526-201ENSMUST00000112504 204 ntBASIC1.49□□□□□ -2.17
Nr1h4Q60641 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.49□□□□□ -2.17
Nr1h4Q60641 Gm24896-201ENSMUST00000122741 135 ntBASIC1.49□□□□□ -2.17
Nr1h4Q60641 Gm24480-201ENSMUST00000157442 103 ntBASIC1.49□□□□□ -2.17
Nr1h4Q60641 Gm24438-201ENSMUST00000157893 115 ntBASIC1.49□□□□□ -2.17
Nr1h4Q60641 Gm23523-201ENSMUST00000180190 107 ntBASIC1.49□□□□□ -2.17
Nr1h4Q60641 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC1.49□□□□□ -2.17
Nr1h4Q60641 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Nr1h4Q60641 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.49□□□□□ -2.17
Nr1h4Q60641 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
Nr1h4Q60641 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.49□□□□□ -2.17
Nr1h4Q60641 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.49□□□□□ -2.17
Nr1h4Q60641 Mir322-201ENSMUST00000083484 95 ntBASIC1.49□□□□□ -2.17
Nr1h4Q60641 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Nr1h4Q60641 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Nr1h4Q60641 Mir669d-201ENSMUST00000104644 121 ntBASIC1.48□□□□□ -2.17
Nr1h4Q60641 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Nr1h4Q60641 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Nr1h4Q60641 Gm14293-201ENSMUST00000118528 577 ntBASIC1.48□□□□□ -2.17
Nr1h4Q60641 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.48□□□□□ -2.17
Nr1h4Q60641 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.48□□□□□ -2.17
Nr1h4Q60641 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC1.48□□□□□ -2.17
Nr1h4Q60641 Gm26278-201ENSMUST00000157098 132 ntBASIC1.48□□□□□ -2.17
Nr1h4Q60641 Gm24481-201ENSMUST00000157210 102 ntBASIC1.48□□□□□ -2.17
Nr1h4Q60641 Gm22559-201ENSMUST00000157329 134 ntBASIC1.48□□□□□ -2.17
Nr1h4Q60641 Gm27510-201ENSMUST00000158214 64 ntBASIC1.48□□□□□ -2.17
Nr1h4Q60641 Gm21827-201ENSMUST00000178247 423 ntBASIC1.48□□□□□ -2.17
Nr1h4Q60641 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Nr1h4Q60641 Gm18357-201ENSMUST00000188184 580 ntBASIC1.48□□□□□ -2.17
Nr1h4Q60641 Gm28437-201ENSMUST00000190277 783 ntBASIC1.48□□□□□ -2.17
Nr1h4Q60641 Gm43487-201ENSMUST00000200331 1031 ntBASIC1.48□□□□□ -2.17
Nr1h4Q60641 Gm44446-201ENSMUST00000204864 255 ntBASIC1.48□□□□□ -2.17
Nr1h4Q60641 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.48□□□□□ -2.17
Nr1h4Q60641 Gm19441-201ENSMUST00000221545 330 ntBASIC1.48□□□□□ -2.17
Nr1h4Q60641 Mir429-201ENSMUST00000083493 83 ntBASIC1.48□□□□□ -2.17
Nr1h4Q60641 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Nr1h4Q60641 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Nr1h4Q60641 Gm25759-201ENSMUST00000103988 129 ntBASIC1.47□□□□□ -2.17
Nr1h4Q60641 Gm15010-201ENSMUST00000117153 407 ntBASIC1.47□□□□□ -2.17
Nr1h4Q60641 Gm16242-201ENSMUST00000117741 334 ntBASIC1.47□□□□□ -2.17
Nr1h4Q60641 Gm13432-201ENSMUST00000118861 241 ntBASIC1.47□□□□□ -2.17
Nr1h4Q60641 Gm25559-201ENSMUST00000157182 74 ntBASIC1.47□□□□□ -2.17
Nr1h4Q60641 Gm24191-201ENSMUST00000157977 122 ntBASIC1.47□□□□□ -2.17
Nr1h4Q60641 Gm20477-201ENSMUST00000174028 280 ntBASIC1.47□□□□□ -2.17
Nr1h4Q60641 Gm21815-201ENSMUST00000178213 664 ntBASIC1.47□□□□□ -2.17
Nr1h4Q60641 Gm20874-201ENSMUST00000178356 663 ntBASIC1.47□□□□□ -2.17
Nr1h4Q60641 Mir6997-201ENSMUST00000184313 71 ntBASIC1.47□□□□□ -2.17
Nr1h4Q60641 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.47□□□□□ -2.17
Nr1h4Q60641 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.47□□□□□ -2.17
Nr1h4Q60641 Gm29352-201ENSMUST00000188054 544 ntBASIC1.47□□□□□ -2.17
Nr1h4Q60641 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
Nr1h4Q60641 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
Nr1h4Q60641 Gm18453-201ENSMUST00000208000 626 ntBASIC1.47□□□□□ -2.17
Nr1h4Q60641 Gm45375-201ENSMUST00000210338 280 ntBASIC1.47□□□□□ -2.17
Nr1h4Q60641 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.47□□□□□ -2.17
Nr1h4Q60641 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.47□□□□□ -2.17
Nr1h4Q60641 Gm25589-201ENSMUST00000082502 166 ntBASIC1.47□□□□□ -2.17
Nr1h4Q60641 Gm22299-201ENSMUST00000082663 136 ntBASIC1.47□□□□□ -2.17
Nr1h4Q60641 Gm24150-201ENSMUST00000082759 104 ntBASIC1.47□□□□□ -2.17
Nr1h4Q60641 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Nr1h4Q60641 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Nr1h4Q60641 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.46□□□□□ -2.18
Nr1h4Q60641 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.46□□□□□ -2.18
Nr1h4Q60641 Gm23589-201ENSMUST00000157660 105 ntBASIC1.46□□□□□ -2.18
Nr1h4Q60641 Gm26024-201ENSMUST00000158657 322 ntBASIC1.46□□□□□ -2.18
Nr1h4Q60641 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC1.46□□□□□ -2.18
Nr1h4Q60641 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.46□□□□□ -2.18
Nr1h4Q60641 Mir7679-201ENSMUST00000183379 63 ntBASIC1.46□□□□□ -2.18
Nr1h4Q60641 Mir3961-201ENSMUST00000198795 59 ntBASIC1.46□□□□□ -2.18
Nr1h4Q60641 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Nr1h4Q60641 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.46□□□□□ -2.18
Nr1h4Q60641 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.46□□□□□ -2.18
Nr1h4Q60641 Ear14-201ENSMUST00000049559 468 ntBASIC1.46□□□□□ -2.18
Nr1h4Q60641 Gm26457-201ENSMUST00000082678 78 ntBASIC1.46□□□□□ -2.18
Nr1h4Q60641 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.46□□□□□ -2.18
Nr1h4Q60641 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Nr1h4Q60641 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Nr1h4Q60641 Gm22834-201ENSMUST00000102021 79 ntBASIC1.45□□□□□ -2.18
Nr1h4Q60641 Gm26249-201ENSMUST00000116708 118 ntBASIC1.45□□□□□ -2.18
Nr1h4Q60641 Gm13672-201ENSMUST00000117554 459 ntBASIC1.45□□□□□ -2.18
Nr1h4Q60641 Gm13457-201ENSMUST00000117885 267 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms