Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm44449-201ENSMUST00000203610 153 ntBASIC0.13□□□□□ -2.39
Trav3-1Q5R1I8 Gm34783-201ENSMUST00000209159 303 ntBASIC0.13□□□□□ -2.39
Trav3-1Q5R1I8 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC0.13□□□□□ -2.39
Trav3-1Q5R1I8 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.13□□□□□ -2.39
Trav3-1Q5R1I8 Gm45704-201ENSMUST00000212582 403 ntBASIC0.13□□□□□ -2.39
Trav3-1Q5R1I8 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
Trav3-1Q5R1I8 Gm23721-201ENSMUST00000083005 107 ntBASIC0.13□□□□□ -2.39
Trav3-1Q5R1I8 Gm26263-201ENSMUST00000083281 164 ntBASIC0.13□□□□□ -2.39
Trav3-1Q5R1I8 Gm15807-201ENSMUST00000119880 1128 ntBASIC0.12□□□□□ -2.39
Trav3-1Q5R1I8 Gm2962-201ENSMUST00000159266 336 ntBASIC0.12□□□□□ -2.39
Trav3-1Q5R1I8 Gm25748-201ENSMUST00000175487 70 ntBASIC0.12□□□□□ -2.39
Trav3-1Q5R1I8 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC0.12□□□□□ -2.39
Trav3-1Q5R1I8 Gm26177-201ENSMUST00000178683 107 ntBASIC0.12□□□□□ -2.39
Trav3-1Q5R1I8 Mir6365-201ENSMUST00000183990 101 ntBASIC0.12□□□□□ -2.39
Trav3-1Q5R1I8 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC0.12□□□□□ -2.39
Trav3-1Q5R1I8 Gm29022-201ENSMUST00000190702 225 ntBASIC0.12□□□□□ -2.39
Trav3-1Q5R1I8 Gm34015-201ENSMUST00000194908 451 ntBASIC0.12□□□□□ -2.39
Trav3-1Q5R1I8 Igkv13-82-201ENSMUST00000200308 346 ntBASIC0.12□□□□□ -2.39
Trav3-1Q5R1I8 Gm5010-201ENSMUST00000213131 260 ntBASIC0.12□□□□□ -2.39
Trav3-1Q5R1I8 Gm18488-201ENSMUST00000215082 364 ntBASIC0.12□□□□□ -2.39
Trav3-1Q5R1I8 AC156560.1-201ENSMUST00000221425 256 ntBASIC0.12□□□□□ -2.39
Trav3-1Q5R1I8 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
Trav3-1Q5R1I8 Gm24977-201ENSMUST00000083106 163 ntBASIC0.12□□□□□ -2.39
Trav3-1Q5R1I8 Mir421-201ENSMUST00000083575 76 ntBASIC0.12□□□□□ -2.39
Trav3-1Q5R1I8 Mir374b-201ENSMUST00000102314 95 ntBASIC0.11□□□□□ -2.39
Trav3-1Q5R1I8 Gm23130-201ENSMUST00000104252 74 ntBASIC0.11□□□□□ -2.39
Trav3-1Q5R1I8 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
Trav3-1Q5R1I8 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC0.11□□□□□ -2.39
Trav3-1Q5R1I8 Gm24963-201ENSMUST00000157916 144 ntBASIC0.11□□□□□ -2.39
Trav3-1Q5R1I8 Snora24-201ENSMUST00000174989 130 ntBASIC0.11□□□□□ -2.39
Trav3-1Q5R1I8 Mir7026-201ENSMUST00000184384 67 ntBASIC0.11□□□□□ -2.39
Trav3-1Q5R1I8 Mir6993-201ENSMUST00000184912 65 ntBASIC0.11□□□□□ -2.39
Trav3-1Q5R1I8 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.11□□□□□ -2.39
Trav3-1Q5R1I8 Gm44491-201ENSMUST00000196794 96 ntBASIC0.11□□□□□ -2.39
Trav3-1Q5R1I8 Gm22972-201ENSMUST00000083297 131 ntBASIC0.11□□□□□ -2.39
Trav3-1Q5R1I8 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.11□□□□□ -2.39
Trav3-1Q5R1I8 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
Trav3-1Q5R1I8 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 Gm15175-201ENSMUST00000117629 132 ntBASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 Gm14551-201ENSMUST00000120802 256 ntBASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 Gm23589-201ENSMUST00000157660 105 ntBASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 Gm26358-201ENSMUST00000158215 97 ntBASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 Gm22983-201ENSMUST00000158308 104 ntBASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 Mir3964-201ENSMUST00000174898 74 ntBASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 Mir6389-201ENSMUST00000183661 102 ntBASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 Gm38395-201ENSMUST00000199904 830 ntBASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 Gm42976-201ENSMUST00000200313 222 ntBASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 Gm44211-201ENSMUST00000204867 145 ntBASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 Gm7495-201ENSMUST00000215099 426 ntBASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 AC101677.1-201ENSMUST00000218590 158 ntBASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 AC120540.1-201ENSMUST00000221879 324 ntBASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 Gm46997-201ENSMUST00000222108 217 ntBASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 Gm24615-201ENSMUST00000083268 113 ntBASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.1□□□□□ -2.39
Trav3-1Q5R1I8 Gm42736-201ENSMUST00000200723 1353 ntBASIC0.09□□□□□ -2.39
Trav3-1Q5R1I8 Gm15010-201ENSMUST00000117153 407 ntBASIC0.09□□□□□ -2.4
Trav3-1Q5R1I8 Gm12507-201ENSMUST00000119155 415 ntBASIC0.09□□□□□ -2.4
Trav3-1Q5R1I8 Gm15177-201ENSMUST00000120491 577 ntBASIC0.09□□□□□ -2.4
Trav3-1Q5R1I8 Gm14980-201ENSMUST00000121247 736 ntBASIC0.09□□□□□ -2.4
Trav3-1Q5R1I8 n-R5s80-201ENSMUST00000122596 111 ntBASIC0.09□□□□□ -2.4
Trav3-1Q5R1I8 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC0.09□□□□□ -2.4
Trav3-1Q5R1I8 Gm22802-201ENSMUST00000175621 89 ntBASIC0.09□□□□□ -2.4
Trav3-1Q5R1I8 Mir7068-201ENSMUST00000183439 74 ntBASIC0.09□□□□□ -2.4
Trav3-1Q5R1I8 Gm27717-201ENSMUST00000183933 151 ntBASIC0.09□□□□□ -2.4
Trav3-1Q5R1I8 Gm28862-201ENSMUST00000188246 163 ntBASIC0.09□□□□□ -2.4
Trav3-1Q5R1I8 Ighv1-32-201ENSMUST00000195149 351 ntBASIC0.09□□□□□ -2.4
Trav3-1Q5R1I8 Gm42855-201ENSMUST00000197388 253 ntBASIC0.09□□□□□ -2.4
Trav3-1Q5R1I8 Gm44988-201ENSMUST00000203835 1161 ntBASIC0.09□□□□□ -2.4
Trav3-1Q5R1I8 Gm45382-201ENSMUST00000210607 151 ntBASIC0.09□□□□□ -2.4
Trav3-1Q5R1I8 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.4
Trav3-1Q5R1I8 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC0.09□□□□□ -2.4
Trav3-1Q5R1I8 AC130829.3-201ENSMUST00000222735 154 ntBASIC0.09□□□□□ -2.4
Trav3-1Q5R1I8 Gm25138-201ENSMUST00000083248 136 ntBASIC0.09□□□□□ -2.4
Trav3-1Q5R1I8 Gm23733-201ENSMUST00000083750 106 ntBASIC0.09□□□□□ -2.4
Trav3-1Q5R1I8 Gm13153-201ENSMUST00000120969 637 ntBASIC0.08□□□□□ -2.4
Trav3-1Q5R1I8 Gm14713-201ENSMUST00000122362 686 ntBASIC0.08□□□□□ -2.4
Trav3-1Q5R1I8 Gm23672-201ENSMUST00000157471 107 ntBASIC0.08□□□□□ -2.4
Trav3-1Q5R1I8 Mir3092-201ENSMUST00000174954 96 ntBASIC0.08□□□□□ -2.4
Trav3-1Q5R1I8 Gm24323-201ENSMUST00000175342 77 ntBASIC0.08□□□□□ -2.4
Trav3-1Q5R1I8 Gm27475-201ENSMUST00000183420 61 ntBASIC0.08□□□□□ -2.4
Trav3-1Q5R1I8 Mir7065-201ENSMUST00000185110 61 ntBASIC0.08□□□□□ -2.4
Trav3-1Q5R1I8 Gm29216-201ENSMUST00000187117 492 ntBASIC0.08□□□□□ -2.4
Trav3-1Q5R1I8 Gm44408-201ENSMUST00000200205 66 ntBASIC0.08□□□□□ -2.4
Trav3-1Q5R1I8 Gm17911-201ENSMUST00000210806 877 ntBASIC0.08□□□□□ -2.4
Trav3-1Q5R1I8 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
Trav3-1Q5R1I8 AC133654.1-201ENSMUST00000228411 672 ntBASIC0.08□□□□□ -2.4
Trav3-1Q5R1I8 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
Trav3-1Q5R1I8 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.08□□□□□ -2.4
Trav3-1Q5R1I8 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.07□□□□□ -2.4
Trav3-1Q5R1I8 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC0.07□□□□□ -2.4
Trav3-1Q5R1I8 Gm13603-201ENSMUST00000119404 83 ntBASIC0.07□□□□□ -2.4
Trav3-1Q5R1I8 Gm12432-201ENSMUST00000119540 186 ntBASIC0.07□□□□□ -2.4
Trav3-1Q5R1I8 Gm13588-201ENSMUST00000120026 135 ntBASIC0.07□□□□□ -2.4
Trav3-1Q5R1I8 Snord116l14-201ENSMUST00000179875 94 ntBASIC0.07□□□□□ -2.4
Trav3-1Q5R1I8 Mir7225-201ENSMUST00000184178 54 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms