Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gm26038-201ENSMUST00000158151 106 ntBASIC0.65□□□□□ -2.31
Trav8d-1Q5R1H8 Gm25715-201ENSMUST00000158627 125 ntBASIC0.65□□□□□ -2.31
Trav8d-1Q5R1H8 Gm22668-201ENSMUST00000158716 260 ntBASIC0.65□□□□□ -2.31
Trav8d-1Q5R1H8 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC0.65□□□□□ -2.31
Trav8d-1Q5R1H8 Gm24897-201ENSMUST00000179033 107 ntBASIC0.65□□□□□ -2.31
Trav8d-1Q5R1H8 Gm22633-201ENSMUST00000179834 107 ntBASIC0.65□□□□□ -2.31
Trav8d-1Q5R1H8 Gm27640-201ENSMUST00000184580 147 ntBASIC0.65□□□□□ -2.31
Trav8d-1Q5R1H8 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC0.65□□□□□ -2.31
Trav8d-1Q5R1H8 Gm38323-201ENSMUST00000192450 210 ntBASIC0.65□□□□□ -2.31
Trav8d-1Q5R1H8 Gm44301-201ENSMUST00000200362 143 ntBASIC0.65□□□□□ -2.31
Trav8d-1Q5R1H8 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.65□□□□□ -2.31
Trav8d-1Q5R1H8 Gm8125-201ENSMUST00000216602 738 ntBASIC0.65□□□□□ -2.31
Trav8d-1Q5R1H8 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC0.65□□□□□ -2.31
Trav8d-1Q5R1H8 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.65□□□□□ -2.31
Trav8d-1Q5R1H8 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
Trav8d-1Q5R1H8 Gm25038-201ENSMUST00000082928 130 ntBASIC0.65□□□□□ -2.31
Trav8d-1Q5R1H8 Gm24494-201ENSMUST00000083804 81 ntBASIC0.65□□□□□ -2.31
Trav8d-1Q5R1H8 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Trav8d-1Q5R1H8 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Trav8d-1Q5R1H8 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 Gm23766-201ENSMUST00000103894 80 ntBASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 Gm22543-201ENSMUST00000104347 94 ntBASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 Gm13356-201ENSMUST00000121678 335 ntBASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 Gm14765-201ENSMUST00000121954 326 ntBASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 Gm9156-201ENSMUST00000189660 463 ntBASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 Gm37923-201ENSMUST00000191624 161 ntBASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 Gm38274-201ENSMUST00000195689 148 ntBASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 Gm23370-201ENSMUST00000199545 130 ntBASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 Gm44254-201ENSMUST00000204184 322 ntBASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 AC162931.1-201ENSMUST00000214184 267 ntBASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 AC069561.2-201ENSMUST00000217596 420 ntBASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 Mir340-201ENSMUST00000083483 98 ntBASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 Mir465-201ENSMUST00000093563 74 ntBASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
Trav8d-1Q5R1H8 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.63□□□□□ -2.31
Trav8d-1Q5R1H8 Mir706-201ENSMUST00000102262 84 ntBASIC0.63□□□□□ -2.31
Trav8d-1Q5R1H8 Gm22785-201ENSMUST00000104087 132 ntBASIC0.63□□□□□ -2.31
Trav8d-1Q5R1H8 Gm25506-201ENSMUST00000104339 70 ntBASIC0.63□□□□□ -2.31
Trav8d-1Q5R1H8 Gm14989-201ENSMUST00000120497 207 ntBASIC0.63□□□□□ -2.31
Trav8d-1Q5R1H8 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.63□□□□□ -2.31
Trav8d-1Q5R1H8 Gm26150-201ENSMUST00000157426 151 ntBASIC0.63□□□□□ -2.31
Trav8d-1Q5R1H8 Gm23317-201ENSMUST00000157999 129 ntBASIC0.63□□□□□ -2.31
Trav8d-1Q5R1H8 Gm17054-201ENSMUST00000169811 259 ntBASIC0.63□□□□□ -2.31
Trav8d-1Q5R1H8 Gm20630-201ENSMUST00000177387 551 ntBASIC0.63□□□□□ -2.31
Trav8d-1Q5R1H8 Gm8151-201ENSMUST00000184817 871 ntBASIC0.63□□□□□ -2.31
Trav8d-1Q5R1H8 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.63□□□□□ -2.31
Trav8d-1Q5R1H8 Gm37693-201ENSMUST00000194562 234 ntBASIC0.63□□□□□ -2.31
Trav8d-1Q5R1H8 Gm42805-201ENSMUST00000196158 276 ntBASIC0.63□□□□□ -2.31
Trav8d-1Q5R1H8 Gm43114-201ENSMUST00000198298 343 ntBASIC0.63□□□□□ -2.31
Trav8d-1Q5R1H8 Gm45590-201ENSMUST00000209715 262 ntBASIC0.63□□□□□ -2.31
Trav8d-1Q5R1H8 AC126267.1-201ENSMUST00000214282 284 ntBASIC0.63□□□□□ -2.31
Trav8d-1Q5R1H8 Snord118-201ENSMUST00000082965 135 ntBASIC0.63□□□□□ -2.31
Trav8d-1Q5R1H8 Gm23503-201ENSMUST00000083903 107 ntBASIC0.63□□□□□ -2.31
Trav8d-1Q5R1H8 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Trav8d-1Q5R1H8 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.63□□□□□ -2.31
Trav8d-1Q5R1H8 Gm26074-201ENSMUST00000104063 129 ntBASIC0.62□□□□□ -2.31
Trav8d-1Q5R1H8 Snord71-201ENSMUST00000104361 85 ntBASIC0.62□□□□□ -2.31
Trav8d-1Q5R1H8 Gm12449-201ENSMUST00000117572 234 ntBASIC0.62□□□□□ -2.31
Trav8d-1Q5R1H8 Gm23277-201ENSMUST00000157914 136 ntBASIC0.62□□□□□ -2.31
Trav8d-1Q5R1H8 Gm25371-201ENSMUST00000158162 101 ntBASIC0.62□□□□□ -2.31
Trav8d-1Q5R1H8 Rnu7-201ENSMUST00000158458 62 ntBASIC0.62□□□□□ -2.31
Trav8d-1Q5R1H8 Gm24020-201ENSMUST00000180156 108 ntBASIC0.62□□□□□ -2.31
Trav8d-1Q5R1H8 Mir7663-201ENSMUST00000183950 61 ntBASIC0.62□□□□□ -2.31
Trav8d-1Q5R1H8 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC0.62□□□□□ -2.31
Trav8d-1Q5R1H8 Gm43245-201ENSMUST00000197603 468 ntBASIC0.62□□□□□ -2.31
Trav8d-1Q5R1H8 Gm25357-201ENSMUST00000082745 72 ntBASIC0.62□□□□□ -2.31
Trav8d-1Q5R1H8 Gm22508-201ENSMUST00000082772 110 ntBASIC0.62□□□□□ -2.31
Trav8d-1Q5R1H8 Gm24045-201ENSMUST00000083113 98 ntBASIC0.62□□□□□ -2.31
Trav8d-1Q5R1H8 Snord35a-201ENSMUST00000083884 90 ntBASIC0.62□□□□□ -2.31
Trav8d-1Q5R1H8 Mir452-201ENSMUST00000093629 85 ntBASIC0.62□□□□□ -2.31
Trav8d-1Q5R1H8 Gm24588-201ENSMUST00000116696 83 ntBASIC0.61□□□□□ -2.31
Trav8d-1Q5R1H8 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC0.61□□□□□ -2.31
Trav8d-1Q5R1H8 Gm24668-201ENSMUST00000158935 104 ntBASIC0.61□□□□□ -2.31
Trav8d-1Q5R1H8 Gm25451-201ENSMUST00000177832 121 ntBASIC0.61□□□□□ -2.31
Trav8d-1Q5R1H8 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
Trav8d-1Q5R1H8 Gm23862-201ENSMUST00000180342 94 ntBASIC0.61□□□□□ -2.31
Trav8d-1Q5R1H8 Gm27271-201ENSMUST00000183509 170 ntBASIC0.61□□□□□ -2.31
Trav8d-1Q5R1H8 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.61□□□□□ -2.31
Trav8d-1Q5R1H8 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
Trav8d-1Q5R1H8 Gm43035-201ENSMUST00000197626 517 ntBASIC0.61□□□□□ -2.31
Trav8d-1Q5R1H8 Gm45878-201ENSMUST00000211839 241 ntBASIC0.61□□□□□ -2.31
Trav8d-1Q5R1H8 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.61□□□□□ -2.31
Trav8d-1Q5R1H8 Gm24977-201ENSMUST00000083106 163 ntBASIC0.61□□□□□ -2.31
Trav8d-1Q5R1H8 Gm24536-201ENSMUST00000083144 107 ntBASIC0.61□□□□□ -2.31
Trav8d-1Q5R1H8 Snord1a-201ENSMUST00000083160 74 ntBASIC0.61□□□□□ -2.31
Trav8d-1Q5R1H8 Gm23453-201ENSMUST00000083326 106 ntBASIC0.61□□□□□ -2.31
Trav8d-1Q5R1H8 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Trav8d-1Q5R1H8 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Trav8d-1Q5R1H8 Gm22673-201ENSMUST00000104415 131 ntBASIC0.6□□□□□ -2.31
Trav8d-1Q5R1H8 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Trav8d-1Q5R1H8 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.6□□□□□ -2.31
Trav8d-1Q5R1H8 Gm25269-201ENSMUST00000122601 104 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms