Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm23057-201ENSMUST00000082801 107 ntBASIC1.1□□□□□ -2.23
Col27a1Q5QNQ9 Gm26328-201ENSMUST00000082821 107 ntBASIC1.1□□□□□ -2.23
Col27a1Q5QNQ9 Gm26324-201ENSMUST00000083073 107 ntBASIC1.1□□□□□ -2.23
Col27a1Q5QNQ9 Gm24535-201ENSMUST00000083140 107 ntBASIC1.1□□□□□ -2.23
Col27a1Q5QNQ9 Gm26127-201ENSMUST00000083193 107 ntBASIC1.1□□□□□ -2.23
Col27a1Q5QNQ9 Gm24456-201ENSMUST00000083198 107 ntBASIC1.1□□□□□ -2.23
Col27a1Q5QNQ9 Gm24018-201ENSMUST00000083232 107 ntBASIC1.1□□□□□ -2.23
Col27a1Q5QNQ9 Gm25794-201ENSMUST00000083286 107 ntBASIC1.1□□□□□ -2.23
Col27a1Q5QNQ9 Gm25577-201ENSMUST00000083414 107 ntBASIC1.1□□□□□ -2.23
Col27a1Q5QNQ9 Gm24861-201ENSMUST00000083459 107 ntBASIC1.1□□□□□ -2.23
Col27a1Q5QNQ9 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.1□□□□□ -2.23
Col27a1Q5QNQ9 Gm23103-201ENSMUST00000083725 107 ntBASIC1.1□□□□□ -2.23
Col27a1Q5QNQ9 Gm23732-201ENSMUST00000083751 107 ntBASIC1.1□□□□□ -2.23
Col27a1Q5QNQ9 Gm22352-201ENSMUST00000083917 107 ntBASIC1.1□□□□□ -2.23
Col27a1Q5QNQ9 Gm24448-201ENSMUST00000083979 107 ntBASIC1.1□□□□□ -2.23
Col27a1Q5QNQ9 Gm22886-201ENSMUST00000093714 107 ntBASIC1.1□□□□□ -2.23
Col27a1Q5QNQ9 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Col27a1Q5QNQ9 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.09□□□□□ -2.23
Col27a1Q5QNQ9 Gm8858-201ENSMUST00000118259 342 ntBASIC1.09□□□□□ -2.23
Col27a1Q5QNQ9 Gm14013-201ENSMUST00000119006 270 ntBASIC1.09□□□□□ -2.23
Col27a1Q5QNQ9 Gm14835-201ENSMUST00000119039 315 ntBASIC1.09□□□□□ -2.23
Col27a1Q5QNQ9 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Col27a1Q5QNQ9 Gm23435-201ENSMUST00000157183 156 ntBASIC1.09□□□□□ -2.23
Col27a1Q5QNQ9 Gm25711-201ENSMUST00000158633 128 ntBASIC1.09□□□□□ -2.23
Col27a1Q5QNQ9 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.09□□□□□ -2.23
Col27a1Q5QNQ9 Mir6399-201ENSMUST00000184050 84 ntBASIC1.09□□□□□ -2.23
Col27a1Q5QNQ9 Gm27588-201ENSMUST00000185096 263 ntBASIC1.09□□□□□ -2.23
Col27a1Q5QNQ9 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.09□□□□□ -2.23
Col27a1Q5QNQ9 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC1.09□□□□□ -2.23
Col27a1Q5QNQ9 Gm44135-201ENSMUST00000205221 368 ntBASIC1.09□□□□□ -2.23
Col27a1Q5QNQ9 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.09□□□□□ -2.23
Col27a1Q5QNQ9 Gm35558-203ENSMUST00000222264 204 ntBASIC1.09□□□□□ -2.23
Col27a1Q5QNQ9 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.09□□□□□ -2.23
Col27a1Q5QNQ9 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Col27a1Q5QNQ9 Gm26265-201ENSMUST00000083277 135 ntBASIC1.09□□□□□ -2.23
Col27a1Q5QNQ9 Mir22-201ENSMUST00000083595 95 ntBASIC1.09□□□□□ -2.23
Col27a1Q5QNQ9 Gm20541-201ENSMUST00000173035 1406 ntBASIC1.09□□□□□ -2.24
Col27a1Q5QNQ9 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Gm14674-201ENSMUST00000117816 342 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 AA413626-201ENSMUST00000121125 494 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Gm25961-201ENSMUST00000157174 135 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Mir6355-201ENSMUST00000183687 106 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Mir496b-201ENSMUST00000184935 113 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Gm28151-201ENSMUST00000189404 951 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Mir151-201ENSMUST00000083678 68 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Mir465c-2-201ENSMUST00000104757 81 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Gm15077-201ENSMUST00000122344 362 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Gm23858-201ENSMUST00000158384 106 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Gm24084-201ENSMUST00000175173 137 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Gm35212-201ENSMUST00000196672 606 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 AC120553.1-201ENSMUST00000227313 260 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 AC132918.1-201ENSMUST00000227877 925 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Gm22508-201ENSMUST00000082772 110 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Gm25475-201ENSMUST00000082825 180 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Mir465c-1-201ENSMUST00000093560 81 ntBASIC1.08□□□□□ -2.24
Col27a1Q5QNQ9 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Gm13378-201ENSMUST00000117483 336 ntBASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Gm25059-201ENSMUST00000157367 117 ntBASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Gm24439-201ENSMUST00000157894 117 ntBASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Gm25163-201ENSMUST00000158905 104 ntBASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Gm24333-201ENSMUST00000175101 84 ntBASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Gm38280-201ENSMUST00000192610 158 ntBASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Gm43556-201ENSMUST00000196186 681 ntBASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Gm43810-201ENSMUST00000201018 232 ntBASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Gm29848-201ENSMUST00000203107 295 ntBASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Gm19428-201ENSMUST00000220512 1995 ntBASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Mir463-201ENSMUST00000093570 75 ntBASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Col27a1Q5QNQ9 Gm23705-201ENSMUST00000104370 130 ntBASIC1.06□□□□□ -2.24
Col27a1Q5QNQ9 Gm12393-201ENSMUST00000117084 848 ntBASIC1.06□□□□□ -2.24
Col27a1Q5QNQ9 Gm24480-201ENSMUST00000157442 103 ntBASIC1.06□□□□□ -2.24
Col27a1Q5QNQ9 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Col27a1Q5QNQ9 Gm37641-201ENSMUST00000193837 239 ntBASIC1.06□□□□□ -2.24
Col27a1Q5QNQ9 Gm44482-201ENSMUST00000199232 103 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms