Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Gm22352-201ENSMUST00000083917 107 ntBASIC1.59□□□□□ -2.15
Clhc1Q5M6W3 Gm24448-201ENSMUST00000083979 107 ntBASIC1.59□□□□□ -2.15
Clhc1Q5M6W3 Gm22798-201ENSMUST00000083992 107 ntBASIC1.59□□□□□ -2.15
Clhc1Q5M6W3 Gm26427-201ENSMUST00000093648 107 ntBASIC1.59□□□□□ -2.15
Clhc1Q5M6W3 Gm22886-201ENSMUST00000093714 107 ntBASIC1.59□□□□□ -2.15
Clhc1Q5M6W3 Gm22170-201ENSMUST00000097247 107 ntBASIC1.59□□□□□ -2.15
Clhc1Q5M6W3 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Clhc1Q5M6W3 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.59□□□□□ -2.16
Clhc1Q5M6W3 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
Clhc1Q5M6W3 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.58□□□□□ -2.16
Clhc1Q5M6W3 Mir374b-201ENSMUST00000102314 95 ntBASIC1.58□□□□□ -2.16
Clhc1Q5M6W3 Gm23950-201ENSMUST00000104026 129 ntBASIC1.58□□□□□ -2.16
Clhc1Q5M6W3 Gm25541-201ENSMUST00000116888 126 ntBASIC1.58□□□□□ -2.16
Clhc1Q5M6W3 Gm23212-201ENSMUST00000122718 60 ntBASIC1.58□□□□□ -2.16
Clhc1Q5M6W3 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.58□□□□□ -2.16
Clhc1Q5M6W3 Gm26149-201ENSMUST00000157432 108 ntBASIC1.58□□□□□ -2.16
Clhc1Q5M6W3 Mir669n-201ENSMUST00000158636 54 ntBASIC1.58□□□□□ -2.16
Clhc1Q5M6W3 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.58□□□□□ -2.16
Clhc1Q5M6W3 Gm37658-201ENSMUST00000192672 315 ntBASIC1.58□□□□□ -2.16
Clhc1Q5M6W3 Gm33866-201ENSMUST00000196911 289 ntBASIC1.58□□□□□ -2.16
Clhc1Q5M6W3 Gm44282-201ENSMUST00000203199 190 ntBASIC1.58□□□□□ -2.16
Clhc1Q5M6W3 Gm44962-201ENSMUST00000206460 279 ntBASIC1.58□□□□□ -2.16
Clhc1Q5M6W3 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
Clhc1Q5M6W3 Mir743b-201ENSMUST00000104751 77 ntBASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm6025-201ENSMUST00000121517 201 ntBASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm25279-201ENSMUST00000122608 133 ntBASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm25392-201ENSMUST00000157335 297 ntBASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm22316-201ENSMUST00000158012 216 ntBASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm20438-201ENSMUST00000174441 329 ntBASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm20874-201ENSMUST00000178356 663 ntBASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm27517-201ENSMUST00000184347 236 ntBASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Mir6352-201ENSMUST00000184495 116 ntBASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm44429-201ENSMUST00000203542 186 ntBASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm26457-201ENSMUST00000082678 78 ntBASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Clhc1Q5M6W3 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Clhc1Q5M6W3 Gm25992-201ENSMUST00000102437 109 ntBASIC1.56□□□□□ -2.16
Clhc1Q5M6W3 Gm13432-201ENSMUST00000118861 241 ntBASIC1.56□□□□□ -2.16
Clhc1Q5M6W3 Gm3788-201ENSMUST00000119949 136 ntBASIC1.56□□□□□ -2.16
Clhc1Q5M6W3 Gm11389-201ENSMUST00000121407 430 ntBASIC1.56□□□□□ -2.16
Clhc1Q5M6W3 Gm22793-201ENSMUST00000157227 330 ntBASIC1.56□□□□□ -2.16
Clhc1Q5M6W3 Gm23557-201ENSMUST00000157820 138 ntBASIC1.56□□□□□ -2.16
Clhc1Q5M6W3 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Clhc1Q5M6W3 Gm24084-201ENSMUST00000175173 137 ntBASIC1.56□□□□□ -2.16
Clhc1Q5M6W3 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.56□□□□□ -2.16
Clhc1Q5M6W3 Gm23090-201ENSMUST00000177331 78 ntBASIC1.56□□□□□ -2.16
Clhc1Q5M6W3 Mir6406-201ENSMUST00000183592 120 ntBASIC1.56□□□□□ -2.16
Clhc1Q5M6W3 Gm28453-203ENSMUST00000187041 189 ntBASIC1.56□□□□□ -2.16
Clhc1Q5M6W3 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.56□□□□□ -2.16
Clhc1Q5M6W3 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.56□□□□□ -2.16
Clhc1Q5M6W3 Gm45907-201ENSMUST00000213023 193 ntBASIC1.56□□□□□ -2.16
Clhc1Q5M6W3 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.56□□□□□ -2.16
Clhc1Q5M6W3 Gm23448-201ENSMUST00000083151 104 ntBASIC1.56□□□□□ -2.16
Clhc1Q5M6W3 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 Gm22834-201ENSMUST00000102021 79 ntBASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 Mir758-201ENSMUST00000103260 81 ntBASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 Gm25485-201ENSMUST00000104120 132 ntBASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 Gm13457-201ENSMUST00000117885 267 ntBASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 Gm22315-201ENSMUST00000158010 143 ntBASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 Gm22665-201ENSMUST00000158720 275 ntBASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 Gm25163-201ENSMUST00000158905 104 ntBASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 Gm22263-201ENSMUST00000180060 104 ntBASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 Mir7679-201ENSMUST00000183379 63 ntBASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 Gm44337-201ENSMUST00000196553 114 ntBASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 Gm43245-201ENSMUST00000197603 468 ntBASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 Mir1291-201ENSMUST00000199842 117 ntBASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 Gm46312-201ENSMUST00000220961 420 ntBASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 Snora34-201ENSMUST00000083402 138 ntBASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
Clhc1Q5M6W3 Gm13714-201ENSMUST00000117313 221 ntBASIC1.54□□□□□ -2.16
Clhc1Q5M6W3 Gm22221-201ENSMUST00000157362 103 ntBASIC1.54□□□□□ -2.16
Clhc1Q5M6W3 Gm26150-201ENSMUST00000157426 151 ntBASIC1.54□□□□□ -2.16
Clhc1Q5M6W3 Gm22963-201ENSMUST00000157960 91 ntBASIC1.54□□□□□ -2.16
Clhc1Q5M6W3 Gm27510-201ENSMUST00000158214 64 ntBASIC1.54□□□□□ -2.16
Clhc1Q5M6W3 Gm26024-201ENSMUST00000158657 322 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms