Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC-0.3□□□□□ -2.46
Ccdc88bQ4QRL3 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC-0.3□□□□□ -2.46
Ccdc88bQ4QRL3 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC-0.3□□□□□ -2.46
Ccdc88bQ4QRL3 AC109212.1-201ENSMUST00000215561 427 ntBASIC-0.3□□□□□ -2.46
Ccdc88bQ4QRL3 AC133176.1-201ENSMUST00000226668 219 ntBASIC-0.3□□□□□ -2.46
Ccdc88bQ4QRL3 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC-0.3□□□□□ -2.46
Ccdc88bQ4QRL3 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC-0.3□□□□□ -2.46
Ccdc88bQ4QRL3 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC-0.31□□□□□ -2.46
Ccdc88bQ4QRL3 Gm12771-201ENSMUST00000120246 135 ntBASIC-0.31□□□□□ -2.46
Ccdc88bQ4QRL3 Gm14269-201ENSMUST00000120455 306 ntBASIC-0.31□□□□□ -2.46
Ccdc88bQ4QRL3 Gm15861-201ENSMUST00000120979 339 ntBASIC-0.31□□□□□ -2.46
Ccdc88bQ4QRL3 Gm25968-201ENSMUST00000157167 100 ntBASIC-0.31□□□□□ -2.46
Ccdc88bQ4QRL3 Gm23777-201ENSMUST00000158994 259 ntBASIC-0.31□□□□□ -2.46
Ccdc88bQ4QRL3 Mir15a-201ENSMUST00000175266 84 ntBASIC-0.31□□□□□ -2.46
Ccdc88bQ4QRL3 Gm18956-201ENSMUST00000192857 480 ntBASIC-0.31□□□□□ -2.46
Ccdc88bQ4QRL3 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC-0.31□□□□□ -2.46
Ccdc88bQ4QRL3 Gm45701-201ENSMUST00000212049 235 ntBASIC-0.31□□□□□ -2.46
Ccdc88bQ4QRL3 Gm20102-201ENSMUST00000222445 220 ntBASIC-0.31□□□□□ -2.46
Ccdc88bQ4QRL3 AC126691.1-201ENSMUST00000226534 202 ntBASIC-0.31□□□□□ -2.46
Ccdc88bQ4QRL3 Gm26226-201ENSMUST00000082509 116 ntBASIC-0.31□□□□□ -2.46
Ccdc88bQ4QRL3 Mir667-201ENSMUST00000102441 92 ntBASIC-0.32□□□□□ -2.46
Ccdc88bQ4QRL3 Gm25558-201ENSMUST00000158083 106 ntBASIC-0.32□□□□□ -2.46
Ccdc88bQ4QRL3 Gm28409-201ENSMUST00000187064 103 ntBASIC-0.32□□□□□ -2.46
Ccdc88bQ4QRL3 Gm44336-201ENSMUST00000203696 468 ntBASIC-0.32□□□□□ -2.46
Ccdc88bQ4QRL3 AC157017.2-201ENSMUST00000218354 777 ntBASIC-0.32□□□□□ -2.46
Ccdc88bQ4QRL3 AC132446.1-201ENSMUST00000222655 226 ntBASIC-0.32□□□□□ -2.46
Ccdc88bQ4QRL3 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC-0.33□□□□□ -2.46
Ccdc88bQ4QRL3 Gm7350-201ENSMUST00000120964 636 ntBASIC-0.33□□□□□ -2.46
Ccdc88bQ4QRL3 Gm23821-201ENSMUST00000158738 106 ntBASIC-0.33□□□□□ -2.46
Ccdc88bQ4QRL3 Gm22527-201ENSMUST00000158816 106 ntBASIC-0.33□□□□□ -2.46
Ccdc88bQ4QRL3 Mir3961-201ENSMUST00000198795 59 ntBASIC-0.33□□□□□ -2.46
Ccdc88bQ4QRL3 AC121960.3-201ENSMUST00000227077 623 ntBASIC-0.33□□□□□ -2.46
Ccdc88bQ4QRL3 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC-0.33□□□□□ -2.46
Ccdc88bQ4QRL3 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
Ccdc88bQ4QRL3 n-R5s50-201ENSMUST00000083168 111 ntBASIC-0.33□□□□□ -2.46
Ccdc88bQ4QRL3 Gm26377-201ENSMUST00000102184 108 ntBASIC-0.34□□□□□ -2.46
Ccdc88bQ4QRL3 Gm14623-201ENSMUST00000121398 603 ntBASIC-0.34□□□□□ -2.46
Ccdc88bQ4QRL3 Gm11358-201ENSMUST00000122310 373 ntBASIC-0.34□□□□□ -2.46
Ccdc88bQ4QRL3 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.34□□□□□ -2.46
Ccdc88bQ4QRL3 Gm23381-201ENSMUST00000157676 94 ntBASIC-0.34□□□□□ -2.46
Ccdc88bQ4QRL3 Gm25663-201ENSMUST00000157698 135 ntBASIC-0.34□□□□□ -2.46
Ccdc88bQ4QRL3 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC-0.34□□□□□ -2.46
Ccdc88bQ4QRL3 Gm38149-201ENSMUST00000191943 339 ntBASIC-0.34□□□□□ -2.46
Ccdc88bQ4QRL3 Gm42925-201ENSMUST00000197359 285 ntBASIC-0.34□□□□□ -2.46
Ccdc88bQ4QRL3 Gm44137-201ENSMUST00000203670 367 ntBASIC-0.34□□□□□ -2.46
Ccdc88bQ4QRL3 AC116319.1-201ENSMUST00000227765 222 ntBASIC-0.34□□□□□ -2.46
Ccdc88bQ4QRL3 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC-0.35□□□□□ -2.46
Ccdc88bQ4QRL3 Gm23419-201ENSMUST00000175523 84 ntBASIC-0.35□□□□□ -2.46
Ccdc88bQ4QRL3 Gm27545-201ENSMUST00000184755 202 ntBASIC-0.35□□□□□ -2.46
Ccdc88bQ4QRL3 Gm44564-201ENSMUST00000207985 180 ntBASIC-0.35□□□□□ -2.46
Ccdc88bQ4QRL3 Gm45965-201ENSMUST00000221192 1284 ntBASIC-0.35□□□□□ -2.46
Ccdc88bQ4QRL3 Gm30738-201ENSMUST00000221346 502 ntBASIC-0.35□□□□□ -2.46
Ccdc88bQ4QRL3 Gm24079-201ENSMUST00000104352 132 ntBASIC-0.35□□□□□ -2.47
Ccdc88bQ4QRL3 Gm26149-201ENSMUST00000157432 108 ntBASIC-0.35□□□□□ -2.47
Ccdc88bQ4QRL3 Gm22765-201ENSMUST00000158371 128 ntBASIC-0.35□□□□□ -2.47
Ccdc88bQ4QRL3 Gm31520-201ENSMUST00000203048 733 ntBASIC-0.35□□□□□ -2.47
Ccdc88bQ4QRL3 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC-0.35□□□□□ -2.47
Ccdc88bQ4QRL3 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
Ccdc88bQ4QRL3 Gm24366-201ENSMUST00000175383 86 ntBASIC-0.36□□□□□ -2.47
Ccdc88bQ4QRL3 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.36□□□□□ -2.47
Ccdc88bQ4QRL3 Gm24311-201ENSMUST00000082570 104 ntBASIC-0.36□□□□□ -2.47
Ccdc88bQ4QRL3 Gm24919-201ENSMUST00000083020 106 ntBASIC-0.36□□□□□ -2.47
Ccdc88bQ4QRL3 AC122887.2-201ENSMUST00000219465 1603 ntBASIC-0.37□□□□□ -2.47
Ccdc88bQ4QRL3 Gm14392-201ENSMUST00000120332 401 ntBASIC-0.37□□□□□ -2.47
Ccdc88bQ4QRL3 Gm14413-201ENSMUST00000122158 408 ntBASIC-0.37□□□□□ -2.47
Ccdc88bQ4QRL3 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
Ccdc88bQ4QRL3 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.37□□□□□ -2.47
Ccdc88bQ4QRL3 Gm24060-201ENSMUST00000157494 95 ntBASIC-0.37□□□□□ -2.47
Ccdc88bQ4QRL3 Gm23114-201ENSMUST00000158478 117 ntBASIC-0.37□□□□□ -2.47
Ccdc88bQ4QRL3 Mir344d-3-201ENSMUST00000175458 80 ntBASIC-0.37□□□□□ -2.47
Ccdc88bQ4QRL3 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.37□□□□□ -2.47
Ccdc88bQ4QRL3 Gm45438-201ENSMUST00000210242 564 ntBASIC-0.37□□□□□ -2.47
Ccdc88bQ4QRL3 Gm18696-201ENSMUST00000220103 274 ntBASIC-0.37□□□□□ -2.47
Ccdc88bQ4QRL3 AC154636.3-201ENSMUST00000221489 1214 ntBASIC-0.37□□□□□ -2.47
Ccdc88bQ4QRL3 Gm38154-201ENSMUST00000195444 340 ntBASIC-0.38□□□□□ -2.47
Ccdc88bQ4QRL3 AC170810.3-201ENSMUST00000226177 374 ntBASIC-0.38□□□□□ -2.47
Ccdc88bQ4QRL3 AC166344.2-201ENSMUST00000226747 374 ntBASIC-0.38□□□□□ -2.47
Ccdc88bQ4QRL3 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC-0.39□□□□□ -2.47
Ccdc88bQ4QRL3 Gm13454-201ENSMUST00000118166 483 ntBASIC-0.39□□□□□ -2.47
Ccdc88bQ4QRL3 Gm25047-201ENSMUST00000122667 104 ntBASIC-0.39□□□□□ -2.47
Ccdc88bQ4QRL3 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC-0.39□□□□□ -2.47
Ccdc88bQ4QRL3 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC-0.39□□□□□ -2.47
Ccdc88bQ4QRL3 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.39□□□□□ -2.47
Ccdc88bQ4QRL3 Mir6388-201ENSMUST00000184417 75 ntBASIC-0.39□□□□□ -2.47
Ccdc88bQ4QRL3 Gm43898-201ENSMUST00000204456 424 ntBASIC-0.39□□□□□ -2.47
Ccdc88bQ4QRL3 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC-0.39□□□□□ -2.47
Ccdc88bQ4QRL3 Gm23727-201ENSMUST00000083352 164 ntBASIC-0.39□□□□□ -2.47
Ccdc88bQ4QRL3 Gm26175-201ENSMUST00000083794 131 ntBASIC-0.39□□□□□ -2.47
Ccdc88bQ4QRL3 Gm19428-201ENSMUST00000220512 1995 ntBASIC-0.39□□□□□ -2.47
Ccdc88bQ4QRL3 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.4□□□□□ -2.47
Ccdc88bQ4QRL3 AC104832.1-201ENSMUST00000222938 550 ntBASIC-0.4□□□□□ -2.47
Ccdc88bQ4QRL3 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC-0.41□□□□□ -2.47
Ccdc88bQ4QRL3 Gm22731-201ENSMUST00000158086 94 ntBASIC-0.41□□□□□ -2.47
Ccdc88bQ4QRL3 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.41□□□□□ -2.47
Ccdc88bQ4QRL3 Gm44524-201ENSMUST00000203899 271 ntBASIC-0.41□□□□□ -2.47
Ccdc88bQ4QRL3 AC161250.2-201ENSMUST00000215114 3107 ntBASIC-0.41□□□□□ -2.47
Ccdc88bQ4QRL3 n-R5s216-201ENSMUST00000122755 112 ntBASIC-0.41□□□□□ -2.48
Ccdc88bQ4QRL3 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC-0.41□□□□□ -2.48
Ccdc88bQ4QRL3 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC-0.41□□□□□ -2.48
Ccdc88bQ4QRL3 Gm22239-201ENSMUST00000175220 103 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms