Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trim40Q3UWA4 Gm34015-201ENSMUST00000194908 451 ntBASIC2□□□□□ -2.09
Trim40Q3UWA4 Gm44393-201ENSMUST00000197418 138 ntBASIC2□□□□□ -2.09
Trim40Q3UWA4 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2□□□□□ -2.09
Trim40Q3UWA4 AC147240.1-201ENSMUST00000218767 431 ntBASIC2□□□□□ -2.09
Trim40Q3UWA4 Gm7214-201ENSMUST00000222428 272 ntBASIC2□□□□□ -2.09
Trim40Q3UWA4 AC133156.1-202ENSMUST00000227284 363 ntBASIC2□□□□□ -2.09
Trim40Q3UWA4 Gm26265-201ENSMUST00000083277 135 ntBASIC2□□□□□ -2.09
Trim40Q3UWA4 Gm23041-201ENSMUST00000083868 106 ntBASIC2□□□□□ -2.09
Trim40Q3UWA4 Gm13518-201ENSMUST00000120018 233 ntBASIC1.99□□□□□ -2.09
Trim40Q3UWA4 Gm26255-201ENSMUST00000122492 103 ntBASIC1.99□□□□□ -2.09
Trim40Q3UWA4 Gm15692-201ENSMUST00000152173 352 ntBASIC1.99□□□□□ -2.09
Trim40Q3UWA4 Gm23589-201ENSMUST00000157660 105 ntBASIC1.99□□□□□ -2.09
Trim40Q3UWA4 Gm25066-201ENSMUST00000158145 123 ntBASIC1.99□□□□□ -2.09
Trim40Q3UWA4 Gm24724-201ENSMUST00000158230 107 ntBASIC1.99□□□□□ -2.09
Trim40Q3UWA4 Gm24922-201ENSMUST00000158511 102 ntBASIC1.99□□□□□ -2.09
Trim40Q3UWA4 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.99□□□□□ -2.09
Trim40Q3UWA4 Gm25956-201ENSMUST00000175115 217 ntBASIC1.99□□□□□ -2.09
Trim40Q3UWA4 Gm25671-201ENSMUST00000178612 105 ntBASIC1.99□□□□□ -2.09
Trim40Q3UWA4 Gm23307-201ENSMUST00000179167 105 ntBASIC1.99□□□□□ -2.09
Trim40Q3UWA4 Gm25286-201ENSMUST00000179790 105 ntBASIC1.99□□□□□ -2.09
Trim40Q3UWA4 Mir6399-201ENSMUST00000184050 84 ntBASIC1.99□□□□□ -2.09
Trim40Q3UWA4 Gm28661-201ENSMUST00000188231 681 ntBASIC1.99□□□□□ -2.09
Trim40Q3UWA4 Gm28717-201ENSMUST00000189950 315 ntBASIC1.99□□□□□ -2.09
Trim40Q3UWA4 Ighv1-46-201ENSMUST00000193988 351 ntBASIC1.99□□□□□ -2.09
Trim40Q3UWA4 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.99□□□□□ -2.09
Trim40Q3UWA4 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.99□□□□□ -2.09
Trim40Q3UWA4 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Trim40Q3UWA4 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.99□□□□□ -2.09
Trim40Q3UWA4 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
Trim40Q3UWA4 Gm23462-201ENSMUST00000083264 104 ntBASIC1.99□□□□□ -2.09
Trim40Q3UWA4 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Trim40Q3UWA4 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Trim40Q3UWA4 AC125374.3-201ENSMUST00000214983 2810 ntBASIC1.99□□□□□ -2.09
Trim40Q3UWA4 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trim40Q3UWA4 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.98□□□□□ -2.09
Trim40Q3UWA4 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.98□□□□□ -2.09
Trim40Q3UWA4 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.98□□□□□ -2.09
Trim40Q3UWA4 Gm14215-201ENSMUST00000120578 221 ntBASIC1.98□□□□□ -2.09
Trim40Q3UWA4 Gm5396-201ENSMUST00000121222 532 ntBASIC1.98□□□□□ -2.09
Trim40Q3UWA4 Gm25808-201ENSMUST00000122784 284 ntBASIC1.98□□□□□ -2.09
Trim40Q3UWA4 Gm23120-201ENSMUST00000157654 287 ntBASIC1.98□□□□□ -2.09
Trim40Q3UWA4 Gm22316-201ENSMUST00000158012 216 ntBASIC1.98□□□□□ -2.09
Trim40Q3UWA4 Gm24726-201ENSMUST00000158232 121 ntBASIC1.98□□□□□ -2.09
Trim40Q3UWA4 Gm22113-201ENSMUST00000158343 104 ntBASIC1.98□□□□□ -2.09
Trim40Q3UWA4 Gm25012-201ENSMUST00000158396 164 ntBASIC1.98□□□□□ -2.09
Trim40Q3UWA4 Gm16038-201ENSMUST00000159317 193 ntBASIC1.98□□□□□ -2.09
Trim40Q3UWA4 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC1.98□□□□□ -2.09
Trim40Q3UWA4 Mir3076-201ENSMUST00000175415 60 ntBASIC1.98□□□□□ -2.09
Trim40Q3UWA4 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.98□□□□□ -2.09
Trim40Q3UWA4 Gm2829-201ENSMUST00000213121 499 ntBASIC1.98□□□□□ -2.09
Trim40Q3UWA4 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.98□□□□□ -2.09
Trim40Q3UWA4 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.98□□□□□ -2.09
Trim40Q3UWA4 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trim40Q3UWA4 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
Trim40Q3UWA4 Gm26500-201ENSMUST00000101867 106 ntBASIC1.97□□□□□ -2.09
Trim40Q3UWA4 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Trim40Q3UWA4 Gm22678-201ENSMUST00000116974 101 ntBASIC1.97□□□□□ -2.09
Trim40Q3UWA4 Gm14624-201ENSMUST00000117746 192 ntBASIC1.97□□□□□ -2.09
Trim40Q3UWA4 Gm23381-201ENSMUST00000157676 94 ntBASIC1.97□□□□□ -2.09
Trim40Q3UWA4 Gm22800-201ENSMUST00000175627 94 ntBASIC1.97□□□□□ -2.09
Trim40Q3UWA4 Gm37162-201ENSMUST00000191708 551 ntBASIC1.97□□□□□ -2.09
Trim40Q3UWA4 Gm42672-201ENSMUST00000197821 352 ntBASIC1.97□□□□□ -2.09
Trim40Q3UWA4 Gm44794-201ENSMUST00000206550 411 ntBASIC1.97□□□□□ -2.09
Trim40Q3UWA4 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.97□□□□□ -2.09
Trim40Q3UWA4 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.97□□□□□ -2.09
Trim40Q3UWA4 AC154245.1-201ENSMUST00000224615 601 ntBASIC1.97□□□□□ -2.09
Trim40Q3UWA4 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Trim40Q3UWA4 Gm23246-201ENSMUST00000083371 67 ntBASIC1.97□□□□□ -2.09
Trim40Q3UWA4 Gm23731-201ENSMUST00000083749 107 ntBASIC1.97□□□□□ -2.09
Trim40Q3UWA4 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.97□□□□□ -2.09
Trim40Q3UWA4 Mir496a-201ENSMUST00000093627 79 ntBASIC1.97□□□□□ -2.09
Trim40Q3UWA4 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Trim40Q3UWA4 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
Trim40Q3UWA4 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Mir759-201ENSMUST00000103254 98 ntBASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm23803-201ENSMUST00000104610 132 ntBASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm25781-201ENSMUST00000122527 84 ntBASIC1.96□□□□□ -2.1
Trim40Q3UWA4 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm25543-201ENSMUST00000122678 312 ntBASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm22491-201ENSMUST00000157190 102 ntBASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm22843-201ENSMUST00000157710 134 ntBASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm17100-201ENSMUST00000168963 272 ntBASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm17919-201ENSMUST00000173344 312 ntBASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm26400-201ENSMUST00000175012 85 ntBASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm24487-201ENSMUST00000178017 63 ntBASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm27532-201ENSMUST00000183726 113 ntBASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm37313-201ENSMUST00000191673 290 ntBASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Trbv18-201ENSMUST00000194256 294 ntBASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm44654-201ENSMUST00000208052 329 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms