Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.95□□□□□ -1.78
Limch1Q3UH68 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.95□□□□□ -1.78
Limch1Q3UH68 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.95□□□□□ -1.78
Limch1Q3UH68 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Limch1Q3UH68 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.95□□□□□ -1.78
Limch1Q3UH68 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Limch1Q3UH68 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Limch1Q3UH68 Gm21940-201ENSMUST00000204940 2278 ntBASIC3.95□□□□□ -1.78
Limch1Q3UH68 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.95□□□□□ -1.78
Limch1Q3UH68 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Limch1Q3UH68 Gm25376-201ENSMUST00000104340 133 ntBASIC3.94□□□□□ -1.78
Limch1Q3UH68 Gm22560-201ENSMUST00000157332 120 ntBASIC3.94□□□□□ -1.78
Limch1Q3UH68 Gm23589-201ENSMUST00000157660 105 ntBASIC3.94□□□□□ -1.78
Limch1Q3UH68 Gm22384-201ENSMUST00000158187 104 ntBASIC3.94□□□□□ -1.78
Limch1Q3UH68 Gm26097-201ENSMUST00000179642 93 ntBASIC3.94□□□□□ -1.78
Limch1Q3UH68 Mir6370-201ENSMUST00000183510 120 ntBASIC3.94□□□□□ -1.78
Limch1Q3UH68 Mir7062-201ENSMUST00000185038 66 ntBASIC3.94□□□□□ -1.78
Limch1Q3UH68 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.94□□□□□ -1.78
Limch1Q3UH68 Gm37693-201ENSMUST00000194562 234 ntBASIC3.94□□□□□ -1.78
Limch1Q3UH68 Gm19244-201ENSMUST00000204340 253 ntBASIC3.94□□□□□ -1.78
Limch1Q3UH68 Gm44600-201ENSMUST00000208540 111 ntBASIC3.94□□□□□ -1.78
Limch1Q3UH68 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.94□□□□□ -1.78
Limch1Q3UH68 Gm26327-201ENSMUST00000093724 111 ntBASIC3.94□□□□□ -1.78
Limch1Q3UH68 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.94□□□□□ -1.78
Limch1Q3UH68 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Limch1Q3UH68 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Limch1Q3UH68 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Limch1Q3UH68 Gm26337-201ENSMUST00000178000 79 ntBASIC3.93□□□□□ -1.78
Limch1Q3UH68 Gm39147-201ENSMUST00000211376 465 ntBASIC3.93□□□□□ -1.78
Limch1Q3UH68 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.93□□□□□ -1.78
Limch1Q3UH68 CU062626.2-201ENSMUST00000223953 274 ntBASIC3.93□□□□□ -1.78
Limch1Q3UH68 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.93□□□□□ -1.78
Limch1Q3UH68 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.93□□□□□ -1.78
Limch1Q3UH68 Gm22299-201ENSMUST00000082663 136 ntBASIC3.93□□□□□ -1.78
Limch1Q3UH68 Snora19-201ENSMUST00000082962 132 ntBASIC3.93□□□□□ -1.78
Limch1Q3UH68 Gm23658-201ENSMUST00000083233 132 ntBASIC3.93□□□□□ -1.78
Limch1Q3UH68 Gm22970-201ENSMUST00000083304 186 ntBASIC3.93□□□□□ -1.78
Limch1Q3UH68 Gm23138-201ENSMUST00000083365 103 ntBASIC3.93□□□□□ -1.78
Limch1Q3UH68 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Limch1Q3UH68 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Limch1Q3UH68 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Limch1Q3UH68 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Limch1Q3UH68 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.92□□□□□ -1.78
Limch1Q3UH68 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.92□□□□□ -1.78
Limch1Q3UH68 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.92□□□□□ -1.78
Limch1Q3UH68 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Limch1Q3UH68 Gm24118-201ENSMUST00000103972 126 ntBASIC3.92□□□□□ -1.78
Limch1Q3UH68 Gm22023-201ENSMUST00000104354 130 ntBASIC3.92□□□□□ -1.78
Limch1Q3UH68 Gm24936-201ENSMUST00000122598 247 ntBASIC3.92□□□□□ -1.78
Limch1Q3UH68 Gm24627-201ENSMUST00000122764 138 ntBASIC3.92□□□□□ -1.78
Limch1Q3UH68 Gm7582-201ENSMUST00000160831 603 ntBASIC3.92□□□□□ -1.78
Limch1Q3UH68 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Limch1Q3UH68 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Limch1Q3UH68 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Limch1Q3UH68 Gm12025-201ENSMUST00000117768 144 ntBASIC3.91□□□□□ -1.78
Limch1Q3UH68 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC3.91□□□□□ -1.78
Limch1Q3UH68 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.91□□□□□ -1.78
Limch1Q3UH68 Gm24138-201ENSMUST00000157572 114 ntBASIC3.91□□□□□ -1.78
Limch1Q3UH68 Gm24056-201ENSMUST00000158617 146 ntBASIC3.91□□□□□ -1.78
Limch1Q3UH68 Gm23922-201ENSMUST00000178792 79 ntBASIC3.91□□□□□ -1.78
Limch1Q3UH68 Gm24657-201ENSMUST00000180085 79 ntBASIC3.91□□□□□ -1.78
Limch1Q3UH68 Gm22996-201ENSMUST00000180236 79 ntBASIC3.91□□□□□ -1.78
Limch1Q3UH68 Gm27869-201ENSMUST00000184327 122 ntBASIC3.91□□□□□ -1.78
Limch1Q3UH68 Gm43563-201ENSMUST00000196761 198 ntBASIC3.91□□□□□ -1.78
Limch1Q3UH68 Gm22443-201ENSMUST00000082890 107 ntBASIC3.91□□□□□ -1.78
Limch1Q3UH68 Mir137-201ENSMUST00000083635 73 ntBASIC3.91□□□□□ -1.78
Limch1Q3UH68 Gm25895-201ENSMUST00000083714 100 ntBASIC3.91□□□□□ -1.78
Limch1Q3UH68 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Limch1Q3UH68 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Limch1Q3UH68 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Limch1Q3UH68 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.91□□□□□ -1.78
Limch1Q3UH68 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Limch1Q3UH68 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Limch1Q3UH68 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.9□□□□□ -1.79
Limch1Q3UH68 Mir767-201ENSMUST00000103256 107 ntBASIC3.9□□□□□ -1.79
Limch1Q3UH68 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Limch1Q3UH68 Gm22521-201ENSMUST00000158272 134 ntBASIC3.9□□□□□ -1.79
Limch1Q3UH68 Mir1966-201ENSMUST00000158807 108 ntBASIC3.9□□□□□ -1.79
Limch1Q3UH68 Gm22910-201ENSMUST00000178568 132 ntBASIC3.9□□□□□ -1.79
Limch1Q3UH68 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.9□□□□□ -1.79
Limch1Q3UH68 Ighv15-1-201ENSMUST00000194450 276 ntBASIC3.9□□□□□ -1.79
Limch1Q3UH68 Gm45687-201ENSMUST00000209454 155 ntBASIC3.9□□□□□ -1.79
Limch1Q3UH68 CT485607.2-201ENSMUST00000214650 91 ntBASIC3.9□□□□□ -1.79
Limch1Q3UH68 Gm25634-201ENSMUST00000082667 105 ntBASIC3.9□□□□□ -1.79
Limch1Q3UH68 Gm24355-201ENSMUST00000082858 122 ntBASIC3.9□□□□□ -1.79
Limch1Q3UH68 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Limch1Q3UH68 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Limch1Q3UH68 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Limch1Q3UH68 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
Limch1Q3UH68 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Limch1Q3UH68 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.89□□□□□ -1.79
Limch1Q3UH68 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.89□□□□□ -1.79
Limch1Q3UH68 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Limch1Q3UH68 Gm7123-201ENSMUST00000117647 213 ntBASIC3.89□□□□□ -1.79
Limch1Q3UH68 Gm15497-201ENSMUST00000119137 551 ntBASIC3.89□□□□□ -1.79
Limch1Q3UH68 Gm22956-201ENSMUST00000122520 80 ntBASIC3.89□□□□□ -1.79
Limch1Q3UH68 Gm26020-201ENSMUST00000122729 183 ntBASIC3.89□□□□□ -1.79
Limch1Q3UH68 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Limch1Q3UH68 Gm19620-201ENSMUST00000195972 434 ntBASIC3.89□□□□□ -1.79
Limch1Q3UH68 Gm44182-201ENSMUST00000204052 115 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 144.7 ms