Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm25054-201ENSMUST00000157370 97 ntBASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Gm23324-201ENSMUST00000157421 131 ntBASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Gm26345-201ENSMUST00000157534 120 ntBASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Gm22099-201ENSMUST00000157925 123 ntBASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Gm22382-201ENSMUST00000158185 130 ntBASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Gm24737-201ENSMUST00000158861 100 ntBASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Gm44459-201ENSMUST00000203926 160 ntBASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Gm45315-201ENSMUST00000209283 333 ntBASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Gm23453-201ENSMUST00000083326 106 ntBASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Gm25124-201ENSMUST00000083345 164 ntBASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.09
Trafd1Q3UDK1 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.96□□□□□ -2.1
Trafd1Q3UDK1 Gm26105-201ENSMUST00000157253 190 ntBASIC1.96□□□□□ -2.1
Trafd1Q3UDK1 Gm23024-201ENSMUST00000158770 292 ntBASIC1.96□□□□□ -2.1
Trafd1Q3UDK1 Gm24177-201ENSMUST00000158927 131 ntBASIC1.96□□□□□ -2.1
Trafd1Q3UDK1 Gm3027-201ENSMUST00000167579 451 ntBASIC1.96□□□□□ -2.1
Trafd1Q3UDK1 Gm27991-201ENSMUST00000184804 137 ntBASIC1.96□□□□□ -2.1
Trafd1Q3UDK1 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trafd1Q3UDK1 Gm43238-201ENSMUST00000196463 359 ntBASIC1.96□□□□□ -2.1
Trafd1Q3UDK1 Gm43624-201ENSMUST00000197368 180 ntBASIC1.96□□□□□ -2.1
Trafd1Q3UDK1 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.96□□□□□ -2.1
Trafd1Q3UDK1 Gm45791-201ENSMUST00000212908 352 ntBASIC1.96□□□□□ -2.1
Trafd1Q3UDK1 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trafd1Q3UDK1 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC1.96□□□□□ -2.1
Trafd1Q3UDK1 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.96□□□□□ -2.1
Trafd1Q3UDK1 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.96□□□□□ -2.1
Trafd1Q3UDK1 AC125311.1-201ENSMUST00000226950 220 ntBASIC1.96□□□□□ -2.1
Trafd1Q3UDK1 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.96□□□□□ -2.1
Trafd1Q3UDK1 AC158981.3-202ENSMUST00000228906 523 ntBASIC1.96□□□□□ -2.1
Trafd1Q3UDK1 Gm23040-201ENSMUST00000083869 163 ntBASIC1.96□□□□□ -2.1
Trafd1Q3UDK1 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trafd1Q3UDK1 Mir669d-2-201ENSMUST00000116854 86 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Gm15211-201ENSMUST00000118932 528 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Gm13339-201ENSMUST00000120651 510 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Gm14770-201ENSMUST00000122197 312 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Gm14402-201ENSMUST00000122217 508 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Gm24770-201ENSMUST00000158505 92 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Gm24085-201ENSMUST00000175172 116 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Gm22308-201ENSMUST00000177609 107 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Mir6950-201ENSMUST00000184438 73 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Mir3569-201ENSMUST00000185080 58 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Gm34015-201ENSMUST00000194908 451 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Mir3068-202ENSMUST00000197755 79 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Gm43739-201ENSMUST00000198294 307 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Gm43680-201ENSMUST00000199466 340 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Mir7217-201ENSMUST00000200304 62 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Gm44881-201ENSMUST00000205425 367 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Gm45119-201ENSMUST00000207612 199 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Gm45375-201ENSMUST00000210338 280 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Gm25929-201ENSMUST00000082784 107 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Gm22997-201ENSMUST00000082845 107 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Gm24044-201ENSMUST00000083107 156 ntBASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Trafd1Q3UDK1 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.94□□□□□ -2.1
Trafd1Q3UDK1 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.94□□□□□ -2.1
Trafd1Q3UDK1 Gm23202-201ENSMUST00000104376 129 ntBASIC1.94□□□□□ -2.1
Trafd1Q3UDK1 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Trafd1Q3UDK1 Gm13396-201ENSMUST00000120617 271 ntBASIC1.94□□□□□ -2.1
Trafd1Q3UDK1 Gm14972-201ENSMUST00000121780 364 ntBASIC1.94□□□□□ -2.1
Trafd1Q3UDK1 Gm6956-201ENSMUST00000134724 546 ntBASIC1.94□□□□□ -2.1
Trafd1Q3UDK1 Gm24724-201ENSMUST00000158230 107 ntBASIC1.94□□□□□ -2.1
Trafd1Q3UDK1 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.94□□□□□ -2.1
Trafd1Q3UDK1 Gm27979-201ENSMUST00000185126 56 ntBASIC1.94□□□□□ -2.1
Trafd1Q3UDK1 Gm20257-202ENSMUST00000188643 130 ntBASIC1.94□□□□□ -2.1
Trafd1Q3UDK1 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.94□□□□□ -2.1
Trafd1Q3UDK1 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.94□□□□□ -2.1
Trafd1Q3UDK1 Gm5023-201ENSMUST00000217442 587 ntBASIC1.94□□□□□ -2.1
Trafd1Q3UDK1 Gm33654-201ENSMUST00000221704 215 ntBASIC1.94□□□□□ -2.1
Trafd1Q3UDK1 Gm21937-201ENSMUST00000222825 218 ntBASIC1.94□□□□□ -2.1
Trafd1Q3UDK1 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.94□□□□□ -2.1
Trafd1Q3UDK1 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.94□□□□□ -2.1
Trafd1Q3UDK1 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 Gm25090-201ENSMUST00000104000 132 ntBASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 Gm24275-201ENSMUST00000116780 146 ntBASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 Gm16328-201ENSMUST00000126985 196 ntBASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 Gm22654-201ENSMUST00000157874 105 ntBASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 Gm22435-201ENSMUST00000158552 128 ntBASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 Gm27410-201ENSMUST00000183851 115 ntBASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 Gm27443-201ENSMUST00000184660 98 ntBASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 Mir7017-201ENSMUST00000184894 62 ntBASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 125.1 ms