Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col8a1Q00780 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col8a1Q00780 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Col8a1Q00780 Gm26081-201ENSMUST00000104068 132 ntBASIC3.02□□□□□ -1.93
Col8a1Q00780 Gm23320-201ENSMUST00000104462 127 ntBASIC3.02□□□□□ -1.93
Col8a1Q00780 Gm15183-201ENSMUST00000118933 348 ntBASIC3.02□□□□□ -1.93
Col8a1Q00780 Gm14629-201ENSMUST00000122428 144 ntBASIC3.02□□□□□ -1.93
Col8a1Q00780 Gm24141-201ENSMUST00000122776 115 ntBASIC3.02□□□□□ -1.93
Col8a1Q00780 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col8a1Q00780 Gm22213-201ENSMUST00000157564 119 ntBASIC3.02□□□□□ -1.93
Col8a1Q00780 Gm23644-201ENSMUST00000157856 77 ntBASIC3.02□□□□□ -1.93
Col8a1Q00780 Gm24930-201ENSMUST00000158315 83 ntBASIC3.02□□□□□ -1.93
Col8a1Q00780 Gm23337-201ENSMUST00000158959 118 ntBASIC3.02□□□□□ -1.93
Col8a1Q00780 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.02□□□□□ -1.93
Col8a1Q00780 Gm24926-201ENSMUST00000178053 79 ntBASIC3.02□□□□□ -1.93
Col8a1Q00780 Gm22632-201ENSMUST00000178266 79 ntBASIC3.02□□□□□ -1.93
Col8a1Q00780 Gm27733-201ENSMUST00000184803 68 ntBASIC3.02□□□□□ -1.93
Col8a1Q00780 Gm5829-201ENSMUST00000191383 351 ntBASIC3.02□□□□□ -1.93
Col8a1Q00780 Gm43199-201ENSMUST00000200019 307 ntBASIC3.02□□□□□ -1.93
Col8a1Q00780 Gm44256-201ENSMUST00000203304 335 ntBASIC3.02□□□□□ -1.93
Col8a1Q00780 Gm44887-201ENSMUST00000208980 178 ntBASIC3.02□□□□□ -1.93
Col8a1Q00780 Gm45445-201ENSMUST00000209586 232 ntBASIC3.02□□□□□ -1.93
Col8a1Q00780 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.02□□□□□ -1.93
Col8a1Q00780 Gm24449-201ENSMUST00000083985 106 ntBASIC3.02□□□□□ -1.93
Col8a1Q00780 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Col8a1Q00780 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Col8a1Q00780 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col8a1Q00780 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.02□□□□□ -1.93
Col8a1Q00780 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col8a1Q00780 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Col8a1Q00780 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.01□□□□□ -1.93
Col8a1Q00780 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Col8a1Q00780 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Col8a1Q00780 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
Col8a1Q00780 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Col8a1Q00780 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Col8a1Q00780 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Col8a1Q00780 Gm14811-201ENSMUST00000117070 117 ntBASIC3.01□□□□□ -1.93
Col8a1Q00780 Gm8840-201ENSMUST00000122454 386 ntBASIC3.01□□□□□ -1.93
Col8a1Q00780 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.01□□□□□ -1.93
Col8a1Q00780 Gm22967-201ENSMUST00000157956 239 ntBASIC3.01□□□□□ -1.93
Col8a1Q00780 Gm28000-201ENSMUST00000184380 85 ntBASIC3.01□□□□□ -1.93
Col8a1Q00780 Gm37698-201ENSMUST00000192605 463 ntBASIC3.01□□□□□ -1.93
Col8a1Q00780 Gm44343-201ENSMUST00000196702 90 ntBASIC3.01□□□□□ -1.93
Col8a1Q00780 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.01□□□□□ -1.93
Col8a1Q00780 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
Col8a1Q00780 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Col8a1Q00780 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.01□□□□□ -1.93
Col8a1Q00780 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Col8a1Q00780 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Col8a1Q00780 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Col8a1Q00780 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.01□□□□□ -1.93
Col8a1Q00780 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Col8a1Q00780 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Col8a1Q00780 Gm42870-201ENSMUST00000199355 3470 ntBASIC3□□□□□ -1.93
Col8a1Q00780 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Col8a1Q00780 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3□□□□□ -1.93
Col8a1Q00780 Gm43751-201ENSMUST00000200275 3071 ntBASIC3□□□□□ -1.93
Col8a1Q00780 Gm2869-201ENSMUST00000124359 2621 ntBASIC3□□□□□ -1.93
Col8a1Q00780 Gm42888-201ENSMUST00000202425 4361 ntBASIC3□□□□□ -1.93
Col8a1Q00780 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3□□□□□ -1.93
Col8a1Q00780 n-R5s31-201ENSMUST00000104162 110 ntBASIC3□□□□□ -1.93
Col8a1Q00780 Gm14215-201ENSMUST00000120578 221 ntBASIC3□□□□□ -1.93
Col8a1Q00780 Gm13801-201ENSMUST00000120750 160 ntBASIC3□□□□□ -1.93
Col8a1Q00780 Gm25269-201ENSMUST00000122601 104 ntBASIC3□□□□□ -1.93
Col8a1Q00780 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Col8a1Q00780 Gm23380-201ENSMUST00000158448 103 ntBASIC3□□□□□ -1.93
Col8a1Q00780 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Col8a1Q00780 Gm27271-201ENSMUST00000183509 170 ntBASIC3□□□□□ -1.93
Col8a1Q00780 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3□□□□□ -1.93
Col8a1Q00780 Gm43602-201ENSMUST00000196772 300 ntBASIC3□□□□□ -1.93
Col8a1Q00780 Gm33866-201ENSMUST00000196911 289 ntBASIC3□□□□□ -1.93
Col8a1Q00780 AC154262.1-201ENSMUST00000225976 286 ntBASIC3□□□□□ -1.93
Col8a1Q00780 AC115291.1-201ENSMUST00000226803 258 ntBASIC3□□□□□ -1.93
Col8a1Q00780 Gm22249-201ENSMUST00000082485 136 ntBASIC3□□□□□ -1.93
Col8a1Q00780 Gm25581-201ENSMUST00000083410 164 ntBASIC3□□□□□ -1.93
Col8a1Q00780 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
Col8a1Q00780 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Col8a1Q00780 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3□□□□□ -1.93
Col8a1Q00780 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
Col8a1Q00780 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
Col8a1Q00780 Gm23256-201ENSMUST00000102235 110 ntBASIC2.99□□□□□ -1.93
Col8a1Q00780 Gm15714-201ENSMUST00000117168 250 ntBASIC2.99□□□□□ -1.93
Col8a1Q00780 Gm12449-201ENSMUST00000117572 234 ntBASIC2.99□□□□□ -1.93
Col8a1Q00780 Gm22557-201ENSMUST00000157804 102 ntBASIC2.99□□□□□ -1.93
Col8a1Q00780 Gm24811-201ENSMUST00000175313 100 ntBASIC2.99□□□□□ -1.93
Col8a1Q00780 Gm17067-202ENSMUST00000180131 123 ntBASIC2.99□□□□□ -1.93
Col8a1Q00780 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.99□□□□□ -1.93
Col8a1Q00780 Gm44052-201ENSMUST00000203382 396 ntBASIC2.99□□□□□ -1.93
Col8a1Q00780 Gm44966-201ENSMUST00000208096 157 ntBASIC2.99□□□□□ -1.93
Col8a1Q00780 Gm45492-201ENSMUST00000211611 288 ntBASIC2.99□□□□□ -1.93
Col8a1Q00780 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.99□□□□□ -1.93
Col8a1Q00780 Gm22304-201ENSMUST00000082688 129 ntBASIC2.99□□□□□ -1.93
Col8a1Q00780 Gm25136-201ENSMUST00000083253 115 ntBASIC2.99□□□□□ -1.93
Col8a1Q00780 Gm22970-201ENSMUST00000083304 186 ntBASIC2.99□□□□□ -1.93
Col8a1Q00780 Gm24163-201ENSMUST00000093660 132 ntBASIC2.99□□□□□ -1.93
Col8a1Q00780 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Col8a1Q00780 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.99□□□□□ -1.93
Col8a1Q00780 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Col8a1Q00780 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms