Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm22868-201ENSMUST00000083955 164 ntBASIC3.3□□□□□ -1.88
SgcbP82349 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SgcbP82349 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SgcbP82349 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SgcbP82349 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SgcbP82349 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SgcbP82349 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SgcbP82349 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SgcbP82349 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SgcbP82349 Gm6952-201ENSMUST00000118629 159 ntBASIC3.29□□□□□ -1.88
SgcbP82349 Gm6025-201ENSMUST00000121517 201 ntBASIC3.29□□□□□ -1.88
SgcbP82349 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.29□□□□□ -1.88
SgcbP82349 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.29□□□□□ -1.88
SgcbP82349 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.29□□□□□ -1.88
SgcbP82349 Gm26049-201ENSMUST00000157313 108 ntBASIC3.29□□□□□ -1.88
SgcbP82349 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC3.29□□□□□ -1.88
SgcbP82349 Gm27189-201ENSMUST00000184119 190 ntBASIC3.29□□□□□ -1.88
SgcbP82349 Gm42855-201ENSMUST00000197388 253 ntBASIC3.29□□□□□ -1.88
SgcbP82349 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.29□□□□□ -1.88
SgcbP82349 Gm43155-201ENSMUST00000202661 494 ntBASIC3.29□□□□□ -1.88
SgcbP82349 Gm45031-201ENSMUST00000206800 288 ntBASIC3.29□□□□□ -1.88
SgcbP82349 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.29□□□□□ -1.88
SgcbP82349 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.29□□□□□ -1.88
SgcbP82349 Gm23095-201ENSMUST00000083446 107 ntBASIC3.29□□□□□ -1.88
SgcbP82349 Gm10172-201ENSMUST00000085929 558 ntBASIC3.29□□□□□ -1.88
SgcbP82349 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SgcbP82349 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
SgcbP82349 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SgcbP82349 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SgcbP82349 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SgcbP82349 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.28□□□□□ -1.88
SgcbP82349 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SgcbP82349 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SgcbP82349 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
SgcbP82349 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SgcbP82349 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SgcbP82349 Gm23063-201ENSMUST00000102350 93 ntBASIC3.28□□□□□ -1.88
SgcbP82349 Gm24581-201ENSMUST00000103962 133 ntBASIC3.28□□□□□ -1.88
SgcbP82349 Gm25105-201ENSMUST00000122477 130 ntBASIC3.28□□□□□ -1.88
SgcbP82349 Gm24141-201ENSMUST00000122776 115 ntBASIC3.28□□□□□ -1.88
SgcbP82349 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC3.28□□□□□ -1.88
SgcbP82349 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.28□□□□□ -1.88
SgcbP82349 Gm22890-201ENSMUST00000158642 144 ntBASIC3.28□□□□□ -1.88
SgcbP82349 Gm22800-201ENSMUST00000175627 94 ntBASIC3.28□□□□□ -1.88
SgcbP82349 Gm20693-201ENSMUST00000177431 211 ntBASIC3.28□□□□□ -1.88
SgcbP82349 Gm22775-201ENSMUST00000177630 120 ntBASIC3.28□□□□□ -1.88
SgcbP82349 Gm23569-201ENSMUST00000180120 120 ntBASIC3.28□□□□□ -1.88
SgcbP82349 Gm27392-201ENSMUST00000185041 101 ntBASIC3.28□□□□□ -1.88
SgcbP82349 Gm37097-201ENSMUST00000193676 336 ntBASIC3.28□□□□□ -1.88
SgcbP82349 Gm9251-201ENSMUST00000197202 628 ntBASIC3.28□□□□□ -1.88
SgcbP82349 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.28□□□□□ -1.88
SgcbP82349 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SgcbP82349 Mir193a-201ENSMUST00000083461 66 ntBASIC3.28□□□□□ -1.88
SgcbP82349 Gm23947-201ENSMUST00000093636 107 ntBASIC3.28□□□□□ -1.88
SgcbP82349 Gm38255-201ENSMUST00000194910 2996 ntBASIC3.28□□□□□ -1.88
SgcbP82349 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SgcbP82349 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SgcbP82349 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.28□□□□□ -1.88
SgcbP82349 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SgcbP82349 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.89
SgcbP82349 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.27□□□□□ -1.89
SgcbP82349 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.27□□□□□ -1.89
SgcbP82349 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SgcbP82349 Gm14448-201ENSMUST00000116383 210 ntBASIC3.27□□□□□ -1.89
SgcbP82349 Gm22193-201ENSMUST00000116868 76 ntBASIC3.27□□□□□ -1.89
SgcbP82349 Gm23260-201ENSMUST00000158317 172 ntBASIC3.27□□□□□ -1.89
SgcbP82349 Gm25464-201ENSMUST00000175481 107 ntBASIC3.27□□□□□ -1.89
SgcbP82349 Gm27773-201ENSMUST00000184087 78 ntBASIC3.27□□□□□ -1.89
SgcbP82349 Gm37001-201ENSMUST00000193377 190 ntBASIC3.27□□□□□ -1.89
SgcbP82349 AC134601.1-201ENSMUST00000221058 109 ntBASIC3.27□□□□□ -1.89
SgcbP82349 Gm22245-201ENSMUST00000082479 103 ntBASIC3.27□□□□□ -1.89
SgcbP82349 Gm26493-201ENSMUST00000083155 136 ntBASIC3.27□□□□□ -1.89
SgcbP82349 Gm25987-201ENSMUST00000083234 107 ntBASIC3.27□□□□□ -1.89
SgcbP82349 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
SgcbP82349 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.27□□□□□ -1.89
SgcbP82349 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SgcbP82349 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
SgcbP82349 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SgcbP82349 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SgcbP82349 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.26□□□□□ -1.89
SgcbP82349 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SgcbP82349 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.26□□□□□ -1.89
SgcbP82349 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.26□□□□□ -1.89
SgcbP82349 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.26□□□□□ -1.89
SgcbP82349 Gm24244-201ENSMUST00000157317 130 ntBASIC3.26□□□□□ -1.89
SgcbP82349 Gm25572-201ENSMUST00000157527 172 ntBASIC3.26□□□□□ -1.89
SgcbP82349 Gm38311-201ENSMUST00000192945 165 ntBASIC3.26□□□□□ -1.89
SgcbP82349 Mir186-201ENSMUST00000083497 71 ntBASIC3.26□□□□□ -1.89
SgcbP82349 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.26□□□□□ -1.89
SgcbP82349 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SgcbP82349 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SgcbP82349 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SgcbP82349 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.25□□□□□ -1.89
SgcbP82349 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
SgcbP82349 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SgcbP82349 Gm12458-201ENSMUST00000119387 495 ntBASIC3.25□□□□□ -1.89
SgcbP82349 Gm16327-201ENSMUST00000137146 228 ntBASIC3.25□□□□□ -1.89
SgcbP82349 Gm23231-201ENSMUST00000157299 104 ntBASIC3.25□□□□□ -1.89
SgcbP82349 Gm22310-201ENSMUST00000157509 116 ntBASIC3.25□□□□□ -1.89
SgcbP82349 Gm23123-201ENSMUST00000157648 144 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms