Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Gm37337-201ENSMUST00000192601 993 ntBASIC1.6□□□□□ -2.15
Ufd1P70362 Gm42622-201ENSMUST00000197229 355 ntBASIC1.6□□□□□ -2.15
Ufd1P70362 Gm42960-201ENSMUST00000202160 241 ntBASIC1.6□□□□□ -2.15
Ufd1P70362 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.6□□□□□ -2.15
Ufd1P70362 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.6□□□□□ -2.15
Ufd1P70362 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.6□□□□□ -2.15
Ufd1P70362 AC104832.1-201ENSMUST00000222938 550 ntBASIC1.6□□□□□ -2.15
Ufd1P70362 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.6□□□□□ -2.15
Ufd1P70362 Gm23627-201ENSMUST00000082459 107 ntBASIC1.6□□□□□ -2.15
Ufd1P70362 Gm22502-201ENSMUST00000082488 107 ntBASIC1.6□□□□□ -2.15
Ufd1P70362 Gm22977-201ENSMUST00000082615 107 ntBASIC1.6□□□□□ -2.15
Ufd1P70362 Gm24149-201ENSMUST00000082757 107 ntBASIC1.6□□□□□ -2.15
Ufd1P70362 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.6□□□□□ -2.15
Ufd1P70362 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
Ufd1P70362 Gm22674-201ENSMUST00000104413 131 ntBASIC1.59□□□□□ -2.15
Ufd1P70362 Gm26249-201ENSMUST00000116708 118 ntBASIC1.59□□□□□ -2.15
Ufd1P70362 Gm25543-201ENSMUST00000122678 312 ntBASIC1.59□□□□□ -2.15
Ufd1P70362 Gm27926-201ENSMUST00000157180 66 ntBASIC1.59□□□□□ -2.15
Ufd1P70362 Gm24075-201ENSMUST00000158175 72 ntBASIC1.59□□□□□ -2.15
Ufd1P70362 Gm23858-201ENSMUST00000158384 106 ntBASIC1.59□□□□□ -2.15
Ufd1P70362 Gm16038-201ENSMUST00000159317 193 ntBASIC1.59□□□□□ -2.15
Ufd1P70362 Gm26180-201ENSMUST00000179942 107 ntBASIC1.59□□□□□ -2.15
Ufd1P70362 Gm29005-201ENSMUST00000186773 320 ntBASIC1.59□□□□□ -2.15
Ufd1P70362 Gm28927-201ENSMUST00000191528 272 ntBASIC1.59□□□□□ -2.15
Ufd1P70362 Mir497-201ENSMUST00000200557 84 ntBASIC1.59□□□□□ -2.15
Ufd1P70362 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.59□□□□□ -2.15
Ufd1P70362 CT025603.4-201ENSMUST00000225777 413 ntBASIC1.59□□□□□ -2.15
Ufd1P70362 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.59□□□□□ -2.16
Ufd1P70362 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
Ufd1P70362 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC1.58□□□□□ -2.16
Ufd1P70362 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
Ufd1P70362 Gm12793-201ENSMUST00000119268 292 ntBASIC1.58□□□□□ -2.16
Ufd1P70362 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC1.58□□□□□ -2.16
Ufd1P70362 Gm14848-201ENSMUST00000121850 467 ntBASIC1.58□□□□□ -2.16
Ufd1P70362 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.58□□□□□ -2.16
Ufd1P70362 Gm24005-201ENSMUST00000158459 296 ntBASIC1.58□□□□□ -2.16
Ufd1P70362 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.58□□□□□ -2.16
Ufd1P70362 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.58□□□□□ -2.16
Ufd1P70362 Gm37353-201ENSMUST00000194497 313 ntBASIC1.58□□□□□ -2.16
Ufd1P70362 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.58□□□□□ -2.16
Ufd1P70362 Gm43367-201ENSMUST00000199986 625 ntBASIC1.58□□□□□ -2.16
Ufd1P70362 Gm43578-201ENSMUST00000201250 459 ntBASIC1.58□□□□□ -2.16
Ufd1P70362 Gm45365-201ENSMUST00000209489 256 ntBASIC1.58□□□□□ -2.16
Ufd1P70362 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.58□□□□□ -2.16
Ufd1P70362 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.58□□□□□ -2.16
Ufd1P70362 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Ufd1P70362 Gm25813-201ENSMUST00000082748 191 ntBASIC1.58□□□□□ -2.16
Ufd1P70362 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Ufd1P70362 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
Ufd1P70362 Gm24098-201ENSMUST00000102075 109 ntBASIC1.57□□□□□ -2.16
Ufd1P70362 Gm25381-201ENSMUST00000102078 109 ntBASIC1.57□□□□□ -2.16
Ufd1P70362 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.57□□□□□ -2.16
Ufd1P70362 Gm23120-201ENSMUST00000157654 287 ntBASIC1.57□□□□□ -2.16
Ufd1P70362 Gm3027-201ENSMUST00000167579 451 ntBASIC1.57□□□□□ -2.16
Ufd1P70362 Gm23191-201ENSMUST00000179147 107 ntBASIC1.57□□□□□ -2.16
Ufd1P70362 Gm5900-201ENSMUST00000179862 375 ntBASIC1.57□□□□□ -2.16
Ufd1P70362 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Ufd1P70362 Gm28282-201ENSMUST00000186072 186 ntBASIC1.57□□□□□ -2.16
Ufd1P70362 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.57□□□□□ -2.16
Ufd1P70362 Gm28848-201ENSMUST00000189984 168 ntBASIC1.57□□□□□ -2.16
Ufd1P70362 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.57□□□□□ -2.16
Ufd1P70362 Gm44655-201ENSMUST00000207768 423 ntBASIC1.57□□□□□ -2.16
Ufd1P70362 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.57□□□□□ -2.16
Ufd1P70362 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.57□□□□□ -2.16
Ufd1P70362 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.57□□□□□ -2.16
Ufd1P70362 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Ufd1P70362 Gm22299-201ENSMUST00000082663 136 ntBASIC1.57□□□□□ -2.16
Ufd1P70362 Gm23731-201ENSMUST00000083749 107 ntBASIC1.57□□□□□ -2.16
Ufd1P70362 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.57□□□□□ -2.16
Ufd1P70362 Mir344c-201ENSMUST00000103919 92 ntBASIC1.56□□□□□ -2.16
Ufd1P70362 Gm25407-201ENSMUST00000104102 134 ntBASIC1.56□□□□□ -2.16
Ufd1P70362 Gm25421-201ENSMUST00000104218 164 ntBASIC1.56□□□□□ -2.16
Ufd1P70362 Gm11854-201ENSMUST00000117839 446 ntBASIC1.56□□□□□ -2.16
Ufd1P70362 Gm22073-201ENSMUST00000122668 189 ntBASIC1.56□□□□□ -2.16
Ufd1P70362 Gm25808-201ENSMUST00000122784 284 ntBASIC1.56□□□□□ -2.16
Ufd1P70362 Gm22538-201ENSMUST00000158169 299 ntBASIC1.56□□□□□ -2.16
Ufd1P70362 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.56□□□□□ -2.16
Ufd1P70362 Mir3086-201ENSMUST00000175072 87 ntBASIC1.56□□□□□ -2.16
Ufd1P70362 Gm24572-201ENSMUST00000175505 88 ntBASIC1.56□□□□□ -2.16
Ufd1P70362 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.56□□□□□ -2.16
Ufd1P70362 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.56□□□□□ -2.16
Ufd1P70362 Gm26864-201ENSMUST00000181346 156 ntBASIC1.56□□□□□ -2.16
Ufd1P70362 Mir7k-201ENSMUST00000184115 110 ntBASIC1.56□□□□□ -2.16
Ufd1P70362 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.56□□□□□ -2.16
Ufd1P70362 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC1.56□□□□□ -2.16
Ufd1P70362 Mir3961-201ENSMUST00000198795 59 ntBASIC1.56□□□□□ -2.16
Ufd1P70362 Mir1291-201ENSMUST00000199842 117 ntBASIC1.56□□□□□ -2.16
Ufd1P70362 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC1.56□□□□□ -2.16
Ufd1P70362 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.56□□□□□ -2.16
Ufd1P70362 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.56□□□□□ -2.16
Ufd1P70362 Snora34-201ENSMUST00000083402 138 ntBASIC1.56□□□□□ -2.16
Ufd1P70362 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.56□□□□□ -2.16
Ufd1P70362 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Ufd1P70362 Gm22193-201ENSMUST00000116868 76 ntBASIC1.55□□□□□ -2.16
Ufd1P70362 Gm12351-201ENSMUST00000118727 292 ntBASIC1.55□□□□□ -2.16
Ufd1P70362 Gm13432-201ENSMUST00000118861 241 ntBASIC1.55□□□□□ -2.16
Ufd1P70362 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Ufd1P70362 Gm23718-201ENSMUST00000157350 307 ntBASIC1.55□□□□□ -2.16
Ufd1P70362 Gm26345-201ENSMUST00000157534 120 ntBASIC1.55□□□□□ -2.16
Ufd1P70362 Gm25066-201ENSMUST00000158145 123 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms