Protein–RNA interactions for Protein: P59114

Pcif1, Phosphorylated CTD-interacting factor 1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1P59114 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.75□□□□□ -1.97
Pcif1P59114 Gm24308-201ENSMUST00000177773 114 ntBASIC2.75□□□□□ -1.97
Pcif1P59114 Gm25020-201ENSMUST00000178071 107 ntBASIC2.75□□□□□ -1.97
Pcif1P59114 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.75□□□□□ -1.97
Pcif1P59114 Gm43035-201ENSMUST00000197626 517 ntBASIC2.75□□□□□ -1.97
Pcif1P59114 Gm43583-201ENSMUST00000199235 303 ntBASIC2.75□□□□□ -1.97
Pcif1P59114 Gm44966-201ENSMUST00000208096 157 ntBASIC2.75□□□□□ -1.97
Pcif1P59114 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.75□□□□□ -1.97
Pcif1P59114 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.75□□□□□ -1.97
Pcif1P59114 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Pcif1P59114 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.74□□□□□ -1.97
Pcif1P59114 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.74□□□□□ -1.97
Pcif1P59114 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.74□□□□□ -1.97
Pcif1P59114 Gm26341-201ENSMUST00000104561 134 ntBASIC2.74□□□□□ -1.97
Pcif1P59114 Gm13756-201ENSMUST00000117618 222 ntBASIC2.74□□□□□ -1.97
Pcif1P59114 Gm12647-201ENSMUST00000118977 265 ntBASIC2.74□□□□□ -1.97
Pcif1P59114 Gm5396-201ENSMUST00000121222 532 ntBASIC2.74□□□□□ -1.97
Pcif1P59114 Gm23867-201ENSMUST00000122649 274 ntBASIC2.74□□□□□ -1.97
Pcif1P59114 Gm26105-201ENSMUST00000157253 190 ntBASIC2.74□□□□□ -1.97
Pcif1P59114 Gm26186-201ENSMUST00000157689 125 ntBASIC2.74□□□□□ -1.97
Pcif1P59114 Gm22447-201ENSMUST00000158155 92 ntBASIC2.74□□□□□ -1.97
Pcif1P59114 Gm25866-201ENSMUST00000158245 112 ntBASIC2.74□□□□□ -1.97
Pcif1P59114 Gm24348-201ENSMUST00000158710 130 ntBASIC2.74□□□□□ -1.97
Pcif1P59114 Gm22114-201ENSMUST00000177756 107 ntBASIC2.74□□□□□ -1.97
Pcif1P59114 Gm25457-201ENSMUST00000179509 107 ntBASIC2.74□□□□□ -1.97
Pcif1P59114 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Pcif1P59114 Gm29597-201ENSMUST00000188035 308 ntBASIC2.74□□□□□ -1.97
Pcif1P59114 Mir7661-201ENSMUST00000197023 61 ntBASIC2.74□□□□□ -1.97
Pcif1P59114 Gm44903-201ENSMUST00000206840 130 ntBASIC2.74□□□□□ -1.97
Pcif1P59114 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.74□□□□□ -1.97
Pcif1P59114 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Pcif1P59114 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.74□□□□□ -1.97
Pcif1P59114 Gm6030-201ENSMUST00000078768 402 ntBASIC2.74□□□□□ -1.97
Pcif1P59114 Gm23625-201ENSMUST00000082457 100 ntBASIC2.74□□□□□ -1.97
Pcif1P59114 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Pcif1P59114 Gm23803-201ENSMUST00000104610 132 ntBASIC2.73□□□□□ -1.97
Pcif1P59114 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Pcif1P59114 Gm23214-201ENSMUST00000122716 157 ntBASIC2.73□□□□□ -1.97
Pcif1P59114 Gm43250-201ENSMUST00000196536 273 ntBASIC2.73□□□□□ -1.97
Pcif1P59114 Mir7227-201ENSMUST00000200408 59 ntBASIC2.73□□□□□ -1.97
Pcif1P59114 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.73□□□□□ -1.97
Pcif1P59114 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.73□□□□□ -1.97
Pcif1P59114 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.73□□□□□ -1.97
Pcif1P59114 Gm25793-201ENSMUST00000083287 107 ntBASIC2.73□□□□□ -1.97
Pcif1P59114 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Pcif1P59114 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.73□□□□□ -1.97
Pcif1P59114 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
Pcif1P59114 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Pcif1P59114 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.72□□□□□ -1.97
Pcif1P59114 Gm24771-201ENSMUST00000158508 137 ntBASIC2.72□□□□□ -1.97
Pcif1P59114 Gm23579-201ENSMUST00000158528 103 ntBASIC2.72□□□□□ -1.97
Pcif1P59114 Gm24799-201ENSMUST00000178431 79 ntBASIC2.72□□□□□ -1.97
Pcif1P59114 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.72□□□□□ -1.97
Pcif1P59114 Mir6399-201ENSMUST00000184050 84 ntBASIC2.72□□□□□ -1.97
Pcif1P59114 Gm29553-201ENSMUST00000189692 279 ntBASIC2.72□□□□□ -1.97
Pcif1P59114 Gm36891-201ENSMUST00000191995 655 ntBASIC2.72□□□□□ -1.97
Pcif1P59114 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.72□□□□□ -1.97
Pcif1P59114 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.72□□□□□ -1.97
Pcif1P59114 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.72□□□□□ -1.97
Pcif1P59114 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.72□□□□□ -1.97
Pcif1P59114 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.72□□□□□ -1.97
Pcif1P59114 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Pcif1P59114 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Pcif1P59114 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Pcif1P59114 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Pcif1P59114 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
Pcif1P59114 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.71□□□□□ -1.98
Pcif1P59114 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Pcif1P59114 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Pcif1P59114 Mir872-201ENSMUST00000104728 81 ntBASIC2.71□□□□□ -1.98
Pcif1P59114 Gm14894-201ENSMUST00000117170 270 ntBASIC2.71□□□□□ -1.98
Pcif1P59114 Gm23232-201ENSMUST00000157300 105 ntBASIC2.71□□□□□ -1.98
Pcif1P59114 Gm22448-201ENSMUST00000179254 107 ntBASIC2.71□□□□□ -1.98
Pcif1P59114 Mir6405-201ENSMUST00000184584 124 ntBASIC2.71□□□□□ -1.98
Pcif1P59114 Gm29665-201ENSMUST00000191457 528 ntBASIC2.71□□□□□ -1.98
Pcif1P59114 Gm37449-201ENSMUST00000193016 270 ntBASIC2.71□□□□□ -1.98
Pcif1P59114 Gm37889-201ENSMUST00000194174 251 ntBASIC2.71□□□□□ -1.98
Pcif1P59114 Gm18658-201ENSMUST00000195558 270 ntBASIC2.71□□□□□ -1.98
Pcif1P59114 Gm43978-201ENSMUST00000203491 451 ntBASIC2.71□□□□□ -1.98
Pcif1P59114 Gm44429-201ENSMUST00000203542 186 ntBASIC2.71□□□□□ -1.98
Pcif1P59114 Gm43914-201ENSMUST00000203592 594 ntBASIC2.71□□□□□ -1.98
Pcif1P59114 Gm2829-201ENSMUST00000213121 499 ntBASIC2.71□□□□□ -1.98
Pcif1P59114 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.71□□□□□ -1.98
Pcif1P59114 Gm26265-201ENSMUST00000083277 135 ntBASIC2.71□□□□□ -1.98
Pcif1P59114 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Pcif1P59114 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.71□□□□□ -1.98
Pcif1P59114 AC121844.2-201ENSMUST00000219067 2066 ntBASIC2.71□□□□□ -1.98
Pcif1P59114 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Pcif1P59114 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
Pcif1P59114 Gm12956-201ENSMUST00000122184 414 ntBASIC2.7□□□□□ -1.98
Pcif1P59114 Gm23889-201ENSMUST00000122689 104 ntBASIC2.7□□□□□ -1.98
Pcif1P59114 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.7□□□□□ -1.98
Pcif1P59114 Gm22101-201ENSMUST00000157928 103 ntBASIC2.7□□□□□ -1.98
Pcif1P59114 Gm24210-201ENSMUST00000158263 133 ntBASIC2.7□□□□□ -1.98
Pcif1P59114 Gm23190-201ENSMUST00000180307 64 ntBASIC2.7□□□□□ -1.98
Pcif1P59114 Gm36946-201ENSMUST00000192706 435 ntBASIC2.7□□□□□ -1.98
Pcif1P59114 Gm44473-201ENSMUST00000204039 152 ntBASIC2.7□□□□□ -1.98
Pcif1P59114 Gm8031-201ENSMUST00000213430 626 ntBASIC2.7□□□□□ -1.98
Pcif1P59114 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.7□□□□□ -1.98
Pcif1P59114 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 157.1 ms