Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm13603-201ENSMUST00000119404 83 ntBASIC0.67□□□□□ -2.3
Cux1P53564 Gm15365-201ENSMUST00000122392 300 ntBASIC0.67□□□□□ -2.3
Cux1P53564 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
Cux1P53564 Gm22164-201ENSMUST00000158413 106 ntBASIC0.67□□□□□ -2.3
Cux1P53564 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Cux1P53564 Gm27640-201ENSMUST00000184580 147 ntBASIC0.67□□□□□ -2.3
Cux1P53564 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC0.67□□□□□ -2.3
Cux1P53564 Gm44655-201ENSMUST00000207768 423 ntBASIC0.67□□□□□ -2.3
Cux1P53564 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC0.67□□□□□ -2.3
Cux1P53564 Gm2628-201ENSMUST00000218019 426 ntBASIC0.67□□□□□ -2.3
Cux1P53564 Gm33654-201ENSMUST00000221704 215 ntBASIC0.67□□□□□ -2.3
Cux1P53564 Snora41-201ENSMUST00000082668 132 ntBASIC0.67□□□□□ -2.3
Cux1P53564 Gm23299-201ENSMUST00000082708 79 ntBASIC0.67□□□□□ -2.3
Cux1P53564 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC0.67□□□□□ -2.3
Cux1P53564 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Cux1P53564 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Cux1P53564 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC0.66□□□□□ -2.3
Cux1P53564 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC0.66□□□□□ -2.3
Cux1P53564 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Cux1P53564 Gm11219-201ENSMUST00000118565 358 ntBASIC0.66□□□□□ -2.3
Cux1P53564 Defa-ps13-201ENSMUST00000120695 204 ntBASIC0.66□□□□□ -2.3
Cux1P53564 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.66□□□□□ -2.3
Cux1P53564 Gm14972-201ENSMUST00000121780 364 ntBASIC0.66□□□□□ -2.3
Cux1P53564 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.66□□□□□ -2.3
Cux1P53564 Gm24221-201ENSMUST00000158833 313 ntBASIC0.66□□□□□ -2.3
Cux1P53564 Gm25838-201ENSMUST00000158920 120 ntBASIC0.66□□□□□ -2.3
Cux1P53564 Gm22800-201ENSMUST00000175627 94 ntBASIC0.66□□□□□ -2.3
Cux1P53564 Gm28344-201ENSMUST00000185704 279 ntBASIC0.66□□□□□ -2.3
Cux1P53564 Gm43026-201ENSMUST00000202972 325 ntBASIC0.66□□□□□ -2.3
Cux1P53564 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC0.66□□□□□ -2.3
Cux1P53564 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
Cux1P53564 AC159476.2-201ENSMUST00000216221 418 ntBASIC0.66□□□□□ -2.3
Cux1P53564 AC153522.1-201ENSMUST00000220047 1090 ntBASIC0.66□□□□□ -2.3
Cux1P53564 CT485612.4-201ENSMUST00000223405 250 ntBASIC0.66□□□□□ -2.3
Cux1P53564 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC0.66□□□□□ -2.3
Cux1P53564 Gm37096-201ENSMUST00000192317 2058 ntBASIC0.65□□□□□ -2.3
Cux1P53564 Gm13356-201ENSMUST00000121678 335 ntBASIC0.65□□□□□ -2.31
Cux1P53564 Gm24388-201ENSMUST00000177872 107 ntBASIC0.65□□□□□ -2.31
Cux1P53564 Gm29600-201ENSMUST00000188687 377 ntBASIC0.65□□□□□ -2.31
Cux1P53564 Gm44336-201ENSMUST00000203696 468 ntBASIC0.65□□□□□ -2.31
Cux1P53564 Gm44828-201ENSMUST00000203745 106 ntBASIC0.65□□□□□ -2.31
Cux1P53564 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.65□□□□□ -2.31
Cux1P53564 AC158606.1-201ENSMUST00000220078 325 ntBASIC0.65□□□□□ -2.31
Cux1P53564 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.64□□□□□ -2.31
Cux1P53564 Gm22785-201ENSMUST00000104087 132 ntBASIC0.64□□□□□ -2.31
Cux1P53564 Gm26102-201ENSMUST00000157251 284 ntBASIC0.64□□□□□ -2.31
Cux1P53564 Gm22233-201ENSMUST00000157464 114 ntBASIC0.64□□□□□ -2.31
Cux1P53564 Gm25885-201ENSMUST00000157779 109 ntBASIC0.64□□□□□ -2.31
Cux1P53564 Gm25868-201ENSMUST00000158253 114 ntBASIC0.64□□□□□ -2.31
Cux1P53564 Gm8114-201ENSMUST00000172225 484 ntBASIC0.64□□□□□ -2.31
Cux1P53564 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC0.64□□□□□ -2.31
Cux1P53564 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC0.64□□□□□ -2.31
Cux1P53564 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC0.64□□□□□ -2.31
Cux1P53564 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC0.64□□□□□ -2.31
Cux1P53564 Gm29613-201ENSMUST00000185846 313 ntBASIC0.64□□□□□ -2.31
Cux1P53564 Gm29544-201ENSMUST00000188860 313 ntBASIC0.64□□□□□ -2.31
Cux1P53564 Gm28808-201ENSMUST00000190978 313 ntBASIC0.64□□□□□ -2.31
Cux1P53564 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC0.64□□□□□ -2.31
Cux1P53564 Gm42623-201ENSMUST00000197225 379 ntBASIC0.64□□□□□ -2.31
Cux1P53564 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC0.64□□□□□ -2.31
Cux1P53564 Gm18160-201ENSMUST00000214279 827 ntBASIC0.64□□□□□ -2.31
Cux1P53564 Gm26224-201ENSMUST00000082506 80 ntBASIC0.64□□□□□ -2.31
Cux1P53564 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC0.64□□□□□ -2.31
Cux1P53564 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC0.64□□□□□ -2.31
Cux1P53564 Gm17377-201ENSMUST00000165184 207 ntBASIC0.64□□□□□ -2.31
Cux1P53564 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.64□□□□□ -2.31
Cux1P53564 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Cux1P53564 Gm12304-201ENSMUST00000120312 385 ntBASIC0.63□□□□□ -2.31
Cux1P53564 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.63□□□□□ -2.31
Cux1P53564 Gm24808-201ENSMUST00000157993 118 ntBASIC0.63□□□□□ -2.31
Cux1P53564 Gm23854-201ENSMUST00000158378 108 ntBASIC0.63□□□□□ -2.31
Cux1P53564 Gm23858-201ENSMUST00000158384 106 ntBASIC0.63□□□□□ -2.31
Cux1P53564 Gm29037-201ENSMUST00000189092 313 ntBASIC0.63□□□□□ -2.31
Cux1P53564 Mir6896-201ENSMUST00000198033 73 ntBASIC0.63□□□□□ -2.31
Cux1P53564 Gm42976-201ENSMUST00000200313 222 ntBASIC0.63□□□□□ -2.31
Cux1P53564 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC0.63□□□□□ -2.31
Cux1P53564 Gm5955-201ENSMUST00000222712 219 ntBASIC0.63□□□□□ -2.31
Cux1P53564 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.63□□□□□ -2.31
Cux1P53564 AA413626-201ENSMUST00000121125 494 ntBASIC0.62□□□□□ -2.31
Cux1P53564 Gm25914-201ENSMUST00000157618 153 ntBASIC0.62□□□□□ -2.31
Cux1P53564 Gm23586-201ENSMUST00000157657 123 ntBASIC0.62□□□□□ -2.31
Cux1P53564 Gm24366-201ENSMUST00000175383 86 ntBASIC0.62□□□□□ -2.31
Cux1P53564 Mir6411-201ENSMUST00000183556 108 ntBASIC0.62□□□□□ -2.31
Cux1P53564 Gm27715-201ENSMUST00000184714 260 ntBASIC0.62□□□□□ -2.31
Cux1P53564 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC0.62□□□□□ -2.31
Cux1P53564 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.62□□□□□ -2.31
Cux1P53564 AC156795.1-201ENSMUST00000214655 414 ntBASIC0.62□□□□□ -2.31
Cux1P53564 Gm24610-201ENSMUST00000083270 109 ntBASIC0.62□□□□□ -2.31
Cux1P53564 Gm25325-201ENSMUST00000122559 86 ntBASIC0.61□□□□□ -2.31
Cux1P53564 Gm23206-201ENSMUST00000122720 184 ntBASIC0.61□□□□□ -2.31
Cux1P53564 Gm22027-201ENSMUST00000122737 127 ntBASIC0.61□□□□□ -2.31
Cux1P53564 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.61□□□□□ -2.31
Cux1P53564 Gm23208-201ENSMUST00000158666 127 ntBASIC0.61□□□□□ -2.31
Cux1P53564 Gm25491-201ENSMUST00000158733 308 ntBASIC0.61□□□□□ -2.31
Cux1P53564 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC0.61□□□□□ -2.31
Cux1P53564 Gm25120-201ENSMUST00000180148 79 ntBASIC0.61□□□□□ -2.31
Cux1P53564 Gm11392-201ENSMUST00000181419 710 ntBASIC0.61□□□□□ -2.31
Cux1P53564 Gm23090-201ENSMUST00000177331 78 ntBASIC0.6□□□□□ -2.31
Cux1P53564 Gm42925-201ENSMUST00000197359 285 ntBASIC0.6□□□□□ -2.31
Cux1P53564 Gm45912-201ENSMUST00000210646 543 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 105.5 ms