Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm23053-201ENSMUST00000175136 96 ntBASIC3.17□□□□□ -1.9
Shmt1P50431 Gm37997-201ENSMUST00000193515 267 ntBASIC3.17□□□□□ -1.9
Shmt1P50431 Gm43427-201ENSMUST00000198188 331 ntBASIC3.17□□□□□ -1.9
Shmt1P50431 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.17□□□□□ -1.9
Shmt1P50431 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.17□□□□□ -1.9
Shmt1P50431 Gm24356-201ENSMUST00000082859 106 ntBASIC3.17□□□□□ -1.9
Shmt1P50431 Snord82-201ENSMUST00000082889 70 ntBASIC3.17□□□□□ -1.9
Shmt1P50431 Gm24204-201ENSMUST00000082950 107 ntBASIC3.17□□□□□ -1.9
Shmt1P50431 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Shmt1P50431 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Shmt1P50431 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.17□□□□□ -1.9
Shmt1P50431 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.17□□□□□ -1.9
Shmt1P50431 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.16□□□□□ -1.9
Shmt1P50431 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Shmt1P50431 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.16□□□□□ -1.9
Shmt1P50431 Gm5396-201ENSMUST00000121222 532 ntBASIC3.16□□□□□ -1.9
Shmt1P50431 Mir6917-201ENSMUST00000184111 61 ntBASIC3.16□□□□□ -1.9
Shmt1P50431 Mir6916-201ENSMUST00000184514 63 ntBASIC3.16□□□□□ -1.9
Shmt1P50431 Gm28627-201ENSMUST00000186141 453 ntBASIC3.16□□□□□ -1.9
Shmt1P50431 Gm19244-201ENSMUST00000204340 253 ntBASIC3.16□□□□□ -1.9
Shmt1P50431 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.16□□□□□ -1.9
Shmt1P50431 Gm30534-201ENSMUST00000217928 207 ntBASIC3.16□□□□□ -1.9
Shmt1P50431 AC121942.2-201ENSMUST00000223824 600 ntBASIC3.16□□□□□ -1.9
Shmt1P50431 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
Shmt1P50431 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Shmt1P50431 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Shmt1P50431 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Shmt1P50431 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC3.15□□□□□ -1.91
Shmt1P50431 Gm23466-201ENSMUST00000157133 106 ntBASIC3.15□□□□□ -1.91
Shmt1P50431 Gm23331-201ENSMUST00000157423 108 ntBASIC3.15□□□□□ -1.91
Shmt1P50431 Gm25914-201ENSMUST00000157618 153 ntBASIC3.15□□□□□ -1.91
Shmt1P50431 Ear-ps8-201ENSMUST00000161935 354 ntBASIC3.15□□□□□ -1.91
Shmt1P50431 Gm23571-201ENSMUST00000180073 127 ntBASIC3.15□□□□□ -1.91
Shmt1P50431 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.15□□□□□ -1.91
Shmt1P50431 Gm6796-201ENSMUST00000211919 243 ntBASIC3.15□□□□□ -1.91
Shmt1P50431 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.15□□□□□ -1.91
Shmt1P50431 Gm26495-201ENSMUST00000083152 137 ntBASIC3.15□□□□□ -1.91
Shmt1P50431 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Shmt1P50431 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.15□□□□□ -1.91
Shmt1P50431 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.91
Shmt1P50431 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.15□□□□□ -1.91
Shmt1P50431 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.14□□□□□ -1.91
Shmt1P50431 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Shmt1P50431 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.14□□□□□ -1.91
Shmt1P50431 Mir499-201ENSMUST00000102357 79 ntBASIC3.14□□□□□ -1.91
Shmt1P50431 Mir1b-201ENSMUST00000117012 122 ntBASIC3.14□□□□□ -1.91
Shmt1P50431 Gm26215-201ENSMUST00000158584 139 ntBASIC3.14□□□□□ -1.91
Shmt1P50431 Gm24106-201ENSMUST00000175498 127 ntBASIC3.14□□□□□ -1.91
Shmt1P50431 Gm18341-201ENSMUST00000197538 622 ntBASIC3.14□□□□□ -1.91
Shmt1P50431 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.14□□□□□ -1.91
Shmt1P50431 Gm23039-201ENSMUST00000083870 161 ntBASIC3.14□□□□□ -1.91
Shmt1P50431 Gm42482-201ENSMUST00000198904 1947 ntBASIC3.14□□□□□ -1.91
Shmt1P50431 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.14□□□□□ -1.91
Shmt1P50431 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Shmt1P50431 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.14□□□□□ -1.91
Shmt1P50431 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Shmt1P50431 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Shmt1P50431 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Shmt1P50431 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Shmt1P50431 Gm25915-201ENSMUST00000104265 126 ntBASIC3.13□□□□□ -1.91
Shmt1P50431 Gm24068-201ENSMUST00000104513 132 ntBASIC3.13□□□□□ -1.91
Shmt1P50431 Gm24132-201ENSMUST00000104745 91 ntBASIC3.13□□□□□ -1.91
Shmt1P50431 Gm14518-201ENSMUST00000117351 542 ntBASIC3.13□□□□□ -1.91
Shmt1P50431 Gm11204-201ENSMUST00000122438 147 ntBASIC3.13□□□□□ -1.91
Shmt1P50431 Gm23183-201ENSMUST00000122595 323 ntBASIC3.13□□□□□ -1.91
Shmt1P50431 Gm25269-201ENSMUST00000122601 104 ntBASIC3.13□□□□□ -1.91
Shmt1P50431 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC3.13□□□□□ -1.91
Shmt1P50431 Gm23716-201ENSMUST00000157348 144 ntBASIC3.13□□□□□ -1.91
Shmt1P50431 Gm22516-201ENSMUST00000158266 124 ntBASIC3.13□□□□□ -1.91
Shmt1P50431 Mir5123-201ENSMUST00000177794 83 ntBASIC3.13□□□□□ -1.91
Shmt1P50431 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Shmt1P50431 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC3.13□□□□□ -1.91
Shmt1P50431 Gm27220-201ENSMUST00000183453 262 ntBASIC3.13□□□□□ -1.91
Shmt1P50431 Gm27761-201ENSMUST00000184091 131 ntBASIC3.13□□□□□ -1.91
Shmt1P50431 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.13□□□□□ -1.91
Shmt1P50431 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Shmt1P50431 AC157476.1-201ENSMUST00000215555 169 ntBASIC3.13□□□□□ -1.91
Shmt1P50431 Gm18188-201ENSMUST00000219386 478 ntBASIC3.13□□□□□ -1.91
Shmt1P50431 AC165138.1-201ENSMUST00000226984 270 ntBASIC3.13□□□□□ -1.91
Shmt1P50431 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Shmt1P50431 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Shmt1P50431 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.13□□□□□ -1.91
Shmt1P50431 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Shmt1P50431 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Shmt1P50431 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Shmt1P50431 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Shmt1P50431 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Shmt1P50431 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.12□□□□□ -1.91
Shmt1P50431 Gm24890-201ENSMUST00000104389 102 ntBASIC3.12□□□□□ -1.91
Shmt1P50431 Gm12934-201ENSMUST00000119221 343 ntBASIC3.12□□□□□ -1.91
Shmt1P50431 Gm22316-201ENSMUST00000158012 216 ntBASIC3.12□□□□□ -1.91
Shmt1P50431 Gm22381-201ENSMUST00000158186 107 ntBASIC3.12□□□□□ -1.91
Shmt1P50431 Gm17166-201ENSMUST00000172006 431 ntBASIC3.12□□□□□ -1.91
Shmt1P50431 Gm43680-201ENSMUST00000199466 340 ntBASIC3.12□□□□□ -1.91
Shmt1P50431 AC165293.1-201ENSMUST00000219669 329 ntBASIC3.12□□□□□ -1.91
Shmt1P50431 Mir208a-201ENSMUST00000083498 83 ntBASIC3.12□□□□□ -1.91
Shmt1P50431 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Shmt1P50431 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.12□□□□□ -1.91
Shmt1P50431 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Shmt1P50431 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 118 ms