Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Rfx1P48377 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Rfx1P48377 Gm8935-202ENSMUST00000105727 1959 ntBASIC3.91□□□□□ -1.78
Rfx1P48377 Mir466p-201ENSMUST00000103925 89 ntBASIC3.91□□□□□ -1.78
Rfx1P48377 Gm13443-201ENSMUST00000120770 555 ntBASIC3.91□□□□□ -1.78
Rfx1P48377 Gm14775-201ENSMUST00000122089 310 ntBASIC3.91□□□□□ -1.78
Rfx1P48377 Gm24911-201ENSMUST00000157292 136 ntBASIC3.91□□□□□ -1.78
Rfx1P48377 Gm23865-201ENSMUST00000157723 97 ntBASIC3.91□□□□□ -1.78
Rfx1P48377 Gm25860-201ENSMUST00000158252 126 ntBASIC3.91□□□□□ -1.78
Rfx1P48377 Gm4479-201ENSMUST00000178807 171 ntBASIC3.91□□□□□ -1.78
Rfx1P48377 Gm37624-201ENSMUST00000193751 219 ntBASIC3.91□□□□□ -1.78
Rfx1P48377 CT010449.1-201ENSMUST00000220624 153 ntBASIC3.91□□□□□ -1.78
Rfx1P48377 Gm4036-201ENSMUST00000220842 626 ntBASIC3.91□□□□□ -1.78
Rfx1P48377 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.91□□□□□ -1.78
Rfx1P48377 Gm6030-201ENSMUST00000078768 402 ntBASIC3.91□□□□□ -1.78
Rfx1P48377 Mir384-201ENSMUST00000083565 88 ntBASIC3.91□□□□□ -1.78
Rfx1P48377 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
Rfx1P48377 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Rfx1P48377 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
Rfx1P48377 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
Rfx1P48377 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Rfx1P48377 Gm12155-201ENSMUST00000121267 160 ntBASIC3.9□□□□□ -1.79
Rfx1P48377 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC3.9□□□□□ -1.79
Rfx1P48377 Gm44355-201ENSMUST00000200417 104 ntBASIC3.9□□□□□ -1.79
Rfx1P48377 Gm19563-201ENSMUST00000222031 270 ntBASIC3.9□□□□□ -1.79
Rfx1P48377 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.9□□□□□ -1.79
Rfx1P48377 Gm9174-201ENSMUST00000078149 255 ntBASIC3.9□□□□□ -1.79
Rfx1P48377 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.9□□□□□ -1.79
Rfx1P48377 Snora19-201ENSMUST00000082962 132 ntBASIC3.9□□□□□ -1.79
Rfx1P48377 Gm23658-201ENSMUST00000083233 132 ntBASIC3.9□□□□□ -1.79
Rfx1P48377 Mir132-201ENSMUST00000083603 66 ntBASIC3.9□□□□□ -1.79
Rfx1P48377 Mir146-201ENSMUST00000083667 65 ntBASIC3.9□□□□□ -1.79
Rfx1P48377 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.9□□□□□ -1.79
Rfx1P48377 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Rfx1P48377 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.9□□□□□ -1.79
Rfx1P48377 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Rfx1P48377 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Rfx1P48377 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
Rfx1P48377 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Rfx1P48377 Mir1198-201ENSMUST00000116995 121 ntBASIC3.89□□□□□ -1.79
Rfx1P48377 Gm15282-201ENSMUST00000117707 300 ntBASIC3.89□□□□□ -1.79
Rfx1P48377 Gm12512-201ENSMUST00000119620 217 ntBASIC3.89□□□□□ -1.79
Rfx1P48377 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Rfx1P48377 Gm25253-201ENSMUST00000179958 107 ntBASIC3.89□□□□□ -1.79
Rfx1P48377 Gm27698-201ENSMUST00000184060 249 ntBASIC3.89□□□□□ -1.79
Rfx1P48377 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.89□□□□□ -1.79
Rfx1P48377 Gm18433-202ENSMUST00000195682 196 ntBASIC3.89□□□□□ -1.79
Rfx1P48377 Gm45288-201ENSMUST00000210236 151 ntBASIC3.89□□□□□ -1.79
Rfx1P48377 AC114010.1-201ENSMUST00000222060 379 ntBASIC3.89□□□□□ -1.79
Rfx1P48377 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.89□□□□□ -1.79
Rfx1P48377 Gm23136-201ENSMUST00000083425 99 ntBASIC3.89□□□□□ -1.79
Rfx1P48377 Gm23040-201ENSMUST00000083869 163 ntBASIC3.89□□□□□ -1.79
Rfx1P48377 Gm25630-201ENSMUST00000084000 162 ntBASIC3.89□□□□□ -1.79
Rfx1P48377 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.89□□□□□ -1.79
Rfx1P48377 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Rfx1P48377 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Rfx1P48377 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Rfx1P48377 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Rfx1P48377 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Rfx1P48377 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Rfx1P48377 Gm22678-201ENSMUST00000116974 101 ntBASIC3.88□□□□□ -1.79
Rfx1P48377 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.88□□□□□ -1.79
Rfx1P48377 Gm25914-201ENSMUST00000157618 153 ntBASIC3.88□□□□□ -1.79
Rfx1P48377 Gm23209-201ENSMUST00000158667 110 ntBASIC3.88□□□□□ -1.79
Rfx1P48377 Gm17113-201ENSMUST00000170118 171 ntBASIC3.88□□□□□ -1.79
Rfx1P48377 Gm25817-201ENSMUST00000177758 121 ntBASIC3.88□□□□□ -1.79
Rfx1P48377 Gm24766-201ENSMUST00000179182 121 ntBASIC3.88□□□□□ -1.79
Rfx1P48377 Gm44352-201ENSMUST00000196358 110 ntBASIC3.88□□□□□ -1.79
Rfx1P48377 Gm43563-201ENSMUST00000196761 198 ntBASIC3.88□□□□□ -1.79
Rfx1P48377 Gm42834-201ENSMUST00000196845 256 ntBASIC3.88□□□□□ -1.79
Rfx1P48377 Gm18991-201ENSMUST00000209225 746 ntBASIC3.88□□□□□ -1.79
Rfx1P48377 CT009696.2-201ENSMUST00000216668 432 ntBASIC3.88□□□□□ -1.79
Rfx1P48377 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Rfx1P48377 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Rfx1P48377 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Rfx1P48377 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Rfx1P48377 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Rfx1P48377 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Rfx1P48377 Gm26135-201ENSMUST00000101993 72 ntBASIC3.87□□□□□ -1.79
Rfx1P48377 Gm24126-201ENSMUST00000104111 106 ntBASIC3.87□□□□□ -1.79
Rfx1P48377 Gm24283-201ENSMUST00000104233 107 ntBASIC3.87□□□□□ -1.79
Rfx1P48377 Mir291a-201ENSMUST00000104815 82 ntBASIC3.87□□□□□ -1.79
Rfx1P48377 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.87□□□□□ -1.79
Rfx1P48377 Gm25424-201ENSMUST00000157612 58 ntBASIC3.87□□□□□ -1.79
Rfx1P48377 Mir1936-201ENSMUST00000158699 93 ntBASIC3.87□□□□□ -1.79
Rfx1P48377 Snord50b-201ENSMUST00000178497 72 ntBASIC3.87□□□□□ -1.79
Rfx1P48377 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Rfx1P48377 Gm27285-201ENSMUST00000183875 127 ntBASIC3.87□□□□□ -1.79
Rfx1P48377 Gm44024-201ENSMUST00000203008 476 ntBASIC3.87□□□□□ -1.79
Rfx1P48377 AC122242.1-201ENSMUST00000224650 304 ntBASIC3.87□□□□□ -1.79
Rfx1P48377 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Rfx1P48377 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Rfx1P48377 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC3.86□□□□□ -1.79
Rfx1P48377 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Rfx1P48377 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Rfx1P48377 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Rfx1P48377 Gm22658-201ENSMUST00000104196 155 ntBASIC3.86□□□□□ -1.79
Rfx1P48377 Gm24480-201ENSMUST00000157442 103 ntBASIC3.86□□□□□ -1.79
Rfx1P48377 Gm23535-201ENSMUST00000157542 106 ntBASIC3.86□□□□□ -1.79
Rfx1P48377 Gm23588-201ENSMUST00000157659 99 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms