Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm20257-202ENSMUST00000188643 130 ntBASIC-0.21□□□□□ -2.44
HttP42859 Gm19280-201ENSMUST00000190191 205 ntBASIC-0.21□□□□□ -2.44
HttP42859 Gm15084-201ENSMUST00000178585 1502 ntBASIC-0.21□□□□□ -2.44
HttP42859 Gm13804-201ENSMUST00000119552 172 ntBASIC-0.21□□□□□ -2.44
HttP42859 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC-0.21□□□□□ -2.44
HttP42859 AC167977.1-201ENSMUST00000221384 234 ntBASIC-0.21□□□□□ -2.44
HttP42859 DQ267101-201ENSMUST00000082562 73 ntBASIC-0.21□□□□□ -2.44
HttP42859 Gm13046-201ENSMUST00000117391 501 ntBASIC-0.22□□□□□ -2.44
HttP42859 Gm14937-201ENSMUST00000119709 208 ntBASIC-0.22□□□□□ -2.44
HttP42859 Gm23887-201ENSMUST00000122683 172 ntBASIC-0.22□□□□□ -2.44
HttP42859 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.22□□□□□ -2.44
HttP42859 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.22□□□□□ -2.44
HttP42859 Gm21171-201ENSMUST00000180048 673 ntBASIC-0.22□□□□□ -2.44
HttP42859 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
HttP42859 Gm24142-201ENSMUST00000101960 107 ntBASIC-0.22□□□□□ -2.44
HttP42859 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC-0.22□□□□□ -2.44
HttP42859 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.22□□□□□ -2.44
HttP42859 Gm6105-201ENSMUST00000200580 624 ntBASIC-0.22□□□□□ -2.44
HttP42859 Gm31520-201ENSMUST00000203048 733 ntBASIC-0.22□□□□□ -2.44
HttP42859 Gm17911-201ENSMUST00000210806 877 ntBASIC-0.22□□□□□ -2.44
HttP42859 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC-0.22□□□□□ -2.44
HttP42859 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC-0.22□□□□□ -2.44
HttP42859 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC-0.22□□□□□ -2.44
HttP42859 Gm25876-201ENSMUST00000104329 119 ntBASIC-0.22□□□□□ -2.45
HttP42859 Gm15312-201ENSMUST00000118827 271 ntBASIC-0.22□□□□□ -2.45
HttP42859 Gm24908-201ENSMUST00000157294 127 ntBASIC-0.22□□□□□ -2.45
HttP42859 Mir6338-201ENSMUST00000183389 109 ntBASIC-0.22□□□□□ -2.45
HttP42859 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC-0.22□□□□□ -2.45
HttP42859 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC-0.22□□□□□ -2.45
HttP42859 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC-0.22□□□□□ -2.45
HttP42859 AC154832.1-201ENSMUST00000228928 141 ntBASIC-0.22□□□□□ -2.45
HttP42859 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
HttP42859 Gm24678-201ENSMUST00000158756 104 ntBASIC-0.23□□□□□ -2.45
HttP42859 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC-0.23□□□□□ -2.45
HttP42859 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.23□□□□□ -2.45
HttP42859 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.23□□□□□ -2.45
HttP42859 Gm26175-201ENSMUST00000083794 131 ntBASIC-0.23□□□□□ -2.45
HttP42859 Gm23170-201ENSMUST00000157158 106 ntBASIC-0.23□□□□□ -2.45
HttP42859 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.23□□□□□ -2.45
HttP42859 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC-0.23□□□□□ -2.45
HttP42859 AC125464.1-201ENSMUST00000228013 512 ntBASIC-0.23□□□□□ -2.45
HttP42859 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.24□□□□□ -2.45
HttP42859 Gm14013-201ENSMUST00000119006 270 ntBASIC-0.24□□□□□ -2.45
HttP42859 Gm14945-201ENSMUST00000119556 1118 ntBASIC-0.24□□□□□ -2.45
HttP42859 Gm43402-201ENSMUST00000197159 159 ntBASIC-0.24□□□□□ -2.45
HttP42859 Gm44326-201ENSMUST00000198226 101 ntBASIC-0.24□□□□□ -2.45
HttP42859 Gm23381-201ENSMUST00000157676 94 ntBASIC-0.24□□□□□ -2.45
HttP42859 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC-0.24□□□□□ -2.45
HttP42859 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC-0.24□□□□□ -2.45
HttP42859 Gm20477-201ENSMUST00000174028 280 ntBASIC-0.24□□□□□ -2.45
HttP42859 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC-0.24□□□□□ -2.45
HttP42859 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC-0.24□□□□□ -2.45
HttP42859 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC-0.24□□□□□ -2.45
HttP42859 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC-0.24□□□□□ -2.45
HttP42859 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC-0.24□□□□□ -2.45
HttP42859 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC-0.24□□□□□ -2.45
HttP42859 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC-0.24□□□□□ -2.45
HttP42859 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC-0.24□□□□□ -2.45
HttP42859 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC-0.24□□□□□ -2.45
HttP42859 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC-0.24□□□□□ -2.45
HttP42859 CT009764.1-201ENSMUST00000222260 483 ntBASIC-0.24□□□□□ -2.45
HttP42859 AC101945.3-201ENSMUST00000226568 153 ntBASIC-0.24□□□□□ -2.45
HttP42859 Gm14445-201ENSMUST00000117051 1484 ntBASIC-0.24□□□□□ -2.45
HttP42859 Gm27935-201ENSMUST00000183894 79 ntBASIC-0.24□□□□□ -2.45
HttP42859 Gm29950-201ENSMUST00000195273 237 ntBASIC-0.24□□□□□ -2.45
HttP42859 Gm44024-201ENSMUST00000203008 476 ntBASIC-0.24□□□□□ -2.45
HttP42859 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC-0.24□□□□□ -2.45
HttP42859 Gm15309-201ENSMUST00000121644 240 ntBASIC-0.25□□□□□ -2.45
HttP42859 Gm25558-201ENSMUST00000158083 106 ntBASIC-0.25□□□□□ -2.45
HttP42859 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC-0.25□□□□□ -2.45
HttP42859 Gm29350-201ENSMUST00000189141 541 ntBASIC-0.25□□□□□ -2.45
HttP42859 Gm26265-202ENSMUST00000196326 133 ntBASIC-0.25□□□□□ -2.45
HttP42859 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.25□□□□□ -2.45
HttP42859 Gm18696-201ENSMUST00000220103 274 ntBASIC-0.25□□□□□ -2.45
HttP42859 AC154636.3-201ENSMUST00000221489 1214 ntBASIC-0.25□□□□□ -2.45
HttP42859 Mir92-2-201ENSMUST00000083679 91 ntBASIC-0.25□□□□□ -2.45
HttP42859 AC122887.2-201ENSMUST00000219465 1603 ntBASIC-0.25□□□□□ -2.45
HttP42859 Gm11893-201ENSMUST00000117829 491 ntBASIC-0.25□□□□□ -2.45
HttP42859 Gm15497-201ENSMUST00000119137 551 ntBASIC-0.25□□□□□ -2.45
HttP42859 Mup-ps21-201ENSMUST00000119998 448 ntBASIC-0.25□□□□□ -2.45
HttP42859 Gm24959-201ENSMUST00000157924 146 ntBASIC-0.25□□□□□ -2.45
HttP42859 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC-0.25□□□□□ -2.45
HttP42859 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC-0.25□□□□□ -2.45
HttP42859 Gm44727-201ENSMUST00000204225 451 ntBASIC-0.25□□□□□ -2.45
HttP42859 AC162931.1-201ENSMUST00000214184 267 ntBASIC-0.25□□□□□ -2.45
HttP42859 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC-0.25□□□□□ -2.45
HttP42859 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
HttP42859 Gm15861-201ENSMUST00000120979 339 ntBASIC-0.26□□□□□ -2.45
HttP42859 Gm22765-201ENSMUST00000158371 128 ntBASIC-0.26□□□□□ -2.45
HttP42859 Gm24321-201ENSMUST00000175348 80 ntBASIC-0.26□□□□□ -2.45
HttP42859 Gm27160-201ENSMUST00000184837 199 ntBASIC-0.26□□□□□ -2.45
HttP42859 AC157017.2-201ENSMUST00000218354 777 ntBASIC-0.26□□□□□ -2.45
HttP42859 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
HttP42859 AC125532.1-201ENSMUST00000216210 2334 ntBASIC-0.26□□□□□ -2.45
HttP42859 Gm13678-201ENSMUST00000118926 340 ntBASIC-0.26□□□□□ -2.45
HttP42859 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC-0.26□□□□□ -2.45
HttP42859 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
HttP42859 Gm7329-201ENSMUST00000185915 210 ntBASIC-0.26□□□□□ -2.45
HttP42859 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC-0.26□□□□□ -2.45
HttP42859 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms