Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.92□□□□□ -1.78
Msx1P13297 Gm10025-201ENSMUST00000079568 372 ntBASIC3.92□□□□□ -1.78
Msx1P13297 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Msx1P13297 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Msx1P13297 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.92□□□□□ -1.78
Msx1P13297 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Msx1P13297 Gm24788-201ENSMUST00000104283 156 ntBASIC3.91□□□□□ -1.78
Msx1P13297 Snord100-201ENSMUST00000116836 74 ntBASIC3.91□□□□□ -1.78
Msx1P13297 Gm23226-201ENSMUST00000116927 103 ntBASIC3.91□□□□□ -1.78
Msx1P13297 Gm22679-201ENSMUST00000116975 100 ntBASIC3.91□□□□□ -1.78
Msx1P13297 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.91□□□□□ -1.78
Msx1P13297 Gm25059-201ENSMUST00000157367 117 ntBASIC3.91□□□□□ -1.78
Msx1P13297 Gm25908-201ENSMUST00000157624 98 ntBASIC3.91□□□□□ -1.78
Msx1P13297 Gm22840-201ENSMUST00000158444 136 ntBASIC3.91□□□□□ -1.78
Msx1P13297 Gm24878-201ENSMUST00000158782 104 ntBASIC3.91□□□□□ -1.78
Msx1P13297 Gm10357-201ENSMUST00000159886 264 ntBASIC3.91□□□□□ -1.78
Msx1P13297 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC3.91□□□□□ -1.78
Msx1P13297 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC3.91□□□□□ -1.78
Msx1P13297 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.91□□□□□ -1.78
Msx1P13297 Gm19908-201ENSMUST00000204684 391 ntBASIC3.91□□□□□ -1.78
Msx1P13297 CT033785.1-201ENSMUST00000224872 272 ntBASIC3.91□□□□□ -1.78
Msx1P13297 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.91□□□□□ -1.78
Msx1P13297 Gm25589-201ENSMUST00000082502 166 ntBASIC3.91□□□□□ -1.78
Msx1P13297 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Msx1P13297 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC3.91□□□□□ -1.78
Msx1P13297 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Msx1P13297 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.9□□□□□ -1.78
Msx1P13297 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Msx1P13297 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.9□□□□□ -1.79
Msx1P13297 Gm12335-201ENSMUST00000119738 327 ntBASIC3.9□□□□□ -1.79
Msx1P13297 n-R5s45-201ENSMUST00000122592 110 ntBASIC3.9□□□□□ -1.79
Msx1P13297 Gm24718-201ENSMUST00000157521 136 ntBASIC3.9□□□□□ -1.79
Msx1P13297 Gm23559-201ENSMUST00000157824 103 ntBASIC3.9□□□□□ -1.79
Msx1P13297 Snord50a-201ENSMUST00000178154 72 ntBASIC3.9□□□□□ -1.79
Msx1P13297 Gm24463-201ENSMUST00000178417 72 ntBASIC3.9□□□□□ -1.79
Msx1P13297 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC3.9□□□□□ -1.79
Msx1P13297 Gm16976-205ENSMUST00000227324 226 ntBASIC3.9□□□□□ -1.79
Msx1P13297 Gm25856-201ENSMUST00000082786 75 ntBASIC3.9□□□□□ -1.79
Msx1P13297 Mir19b-2-201ENSMUST00000083539 84 ntBASIC3.9□□□□□ -1.79
Msx1P13297 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Msx1P13297 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.9□□□□□ -1.79
Msx1P13297 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Msx1P13297 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Msx1P13297 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.89□□□□□ -1.79
Msx1P13297 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Msx1P13297 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Msx1P13297 Gm37747-201ENSMUST00000193717 4003 ntBASIC3.89□□□□□ -1.79
Msx1P13297 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Msx1P13297 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Msx1P13297 Gm23271-201ENSMUST00000104052 124 ntBASIC3.89□□□□□ -1.79
Msx1P13297 Gm22193-201ENSMUST00000116868 76 ntBASIC3.89□□□□□ -1.79
Msx1P13297 Gm11982-201ENSMUST00000121480 314 ntBASIC3.89□□□□□ -1.79
Msx1P13297 Gm12013-201ENSMUST00000121971 155 ntBASIC3.89□□□□□ -1.79
Msx1P13297 Gm14473-201ENSMUST00000122269 557 ntBASIC3.89□□□□□ -1.79
Msx1P13297 Gm22790-201ENSMUST00000157229 129 ntBASIC3.89□□□□□ -1.79
Msx1P13297 Gm26036-201ENSMUST00000158149 144 ntBASIC3.89□□□□□ -1.79
Msx1P13297 Gm22382-201ENSMUST00000158185 130 ntBASIC3.89□□□□□ -1.79
Msx1P13297 Mir7062-201ENSMUST00000185038 66 ntBASIC3.89□□□□□ -1.79
Msx1P13297 Gm20058-201ENSMUST00000186939 284 ntBASIC3.89□□□□□ -1.79
Msx1P13297 Gm37377-201ENSMUST00000191733 304 ntBASIC3.89□□□□□ -1.79
Msx1P13297 AC126672.1-201ENSMUST00000217096 396 ntBASIC3.89□□□□□ -1.79
Msx1P13297 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.89□□□□□ -1.79
Msx1P13297 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Msx1P13297 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Msx1P13297 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC3.89□□□□□ -1.79
Msx1P13297 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Msx1P13297 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Msx1P13297 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Msx1P13297 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.88□□□□□ -1.79
Msx1P13297 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.88□□□□□ -1.79
Msx1P13297 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Msx1P13297 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Msx1P13297 Gm43705-201ENSMUST00000195958 3717 ntBASIC3.88□□□□□ -1.79
Msx1P13297 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Msx1P13297 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Msx1P13297 Gm13478-201ENSMUST00000118312 413 ntBASIC3.88□□□□□ -1.79
Msx1P13297 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.88□□□□□ -1.79
Msx1P13297 Gm24246-201ENSMUST00000157315 132 ntBASIC3.88□□□□□ -1.79
Msx1P13297 Gm23865-201ENSMUST00000157723 97 ntBASIC3.88□□□□□ -1.79
Msx1P13297 Gm24850-201ENSMUST00000158029 119 ntBASIC3.88□□□□□ -1.79
Msx1P13297 Gm23665-201ENSMUST00000158054 62 ntBASIC3.88□□□□□ -1.79
Msx1P13297 Gm22527-201ENSMUST00000158816 106 ntBASIC3.88□□□□□ -1.79
Msx1P13297 Mir1251-201ENSMUST00000175486 84 ntBASIC3.88□□□□□ -1.79
Msx1P13297 Gm23860-201ENSMUST00000179446 132 ntBASIC3.88□□□□□ -1.79
Msx1P13297 Gm27718-201ENSMUST00000183721 86 ntBASIC3.88□□□□□ -1.79
Msx1P13297 Gm28912-201ENSMUST00000189001 234 ntBASIC3.88□□□□□ -1.79
Msx1P13297 Gm28169-201ENSMUST00000190342 345 ntBASIC3.88□□□□□ -1.79
Msx1P13297 Gm37300-201ENSMUST00000193327 280 ntBASIC3.88□□□□□ -1.79
Msx1P13297 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.88□□□□□ -1.79
Msx1P13297 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.88□□□□□ -1.79
Msx1P13297 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Msx1P13297 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.88□□□□□ -1.79
Msx1P13297 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Msx1P13297 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Msx1P13297 Gm37345-201ENSMUST00000193062 3138 ntBASIC3.88□□□□□ -1.79
Msx1P13297 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Msx1P13297 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.87□□□□□ -1.79
Msx1P13297 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Msx1P13297 Gm15289-201ENSMUST00000117793 244 ntBASIC3.87□□□□□ -1.79
Msx1P13297 Gm24908-201ENSMUST00000157294 127 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms