Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm22248-201ENSMUST00000082482 150 ntBASIC3.75□□□□□ -1.81
RaraP11416 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
RaraP11416 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
RaraP11416 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.75□□□□□ -1.81
RaraP11416 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.75□□□□□ -1.81
RaraP11416 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
RaraP11416 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RaraP11416 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
RaraP11416 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.74□□□□□ -1.81
RaraP11416 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
RaraP11416 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
RaraP11416 Gm22003-201ENSMUST00000101885 107 ntBASIC3.74□□□□□ -1.81
RaraP11416 Gm23063-201ENSMUST00000102350 93 ntBASIC3.74□□□□□ -1.81
RaraP11416 Gm23202-201ENSMUST00000104376 129 ntBASIC3.74□□□□□ -1.81
RaraP11416 Gm12351-201ENSMUST00000118727 292 ntBASIC3.74□□□□□ -1.81
RaraP11416 Gm11786-201ENSMUST00000120799 155 ntBASIC3.74□□□□□ -1.81
RaraP11416 Gm26276-201ENSMUST00000157099 109 ntBASIC3.74□□□□□ -1.81
RaraP11416 Gm26049-201ENSMUST00000157313 108 ntBASIC3.74□□□□□ -1.81
RaraP11416 Gm24505-201ENSMUST00000157682 126 ntBASIC3.74□□□□□ -1.81
RaraP11416 Gm25066-201ENSMUST00000158145 123 ntBASIC3.74□□□□□ -1.81
RaraP11416 Gm23476-201ENSMUST00000158881 274 ntBASIC3.74□□□□□ -1.81
RaraP11416 Gm22756-201ENSMUST00000180118 107 ntBASIC3.74□□□□□ -1.81
RaraP11416 Gm27793-201ENSMUST00000183405 76 ntBASIC3.74□□□□□ -1.81
RaraP11416 Mir6914-201ENSMUST00000184999 69 ntBASIC3.74□□□□□ -1.81
RaraP11416 Gm29553-201ENSMUST00000189692 279 ntBASIC3.74□□□□□ -1.81
RaraP11416 Gm19620-201ENSMUST00000195972 434 ntBASIC3.74□□□□□ -1.81
RaraP11416 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
RaraP11416 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.74□□□□□ -1.81
RaraP11416 Gm26054-201ENSMUST00000083037 107 ntBASIC3.74□□□□□ -1.81
RaraP11416 Gm25480-201ENSMUST00000083217 133 ntBASIC3.74□□□□□ -1.81
RaraP11416 Gm24492-201ENSMUST00000083798 107 ntBASIC3.74□□□□□ -1.81
RaraP11416 Gm24449-201ENSMUST00000083985 106 ntBASIC3.74□□□□□ -1.81
RaraP11416 Mir488-201ENSMUST00000093595 109 ntBASIC3.74□□□□□ -1.81
RaraP11416 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.74□□□□□ -1.81
RaraP11416 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
RaraP11416 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
RaraP11416 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.73□□□□□ -1.81
RaraP11416 Gm24127-201ENSMUST00000104110 130 ntBASIC3.73□□□□□ -1.81
RaraP11416 Gm23671-201ENSMUST00000157472 103 ntBASIC3.73□□□□□ -1.81
RaraP11416 Gm22310-201ENSMUST00000157509 116 ntBASIC3.73□□□□□ -1.81
RaraP11416 Gm23260-201ENSMUST00000158317 172 ntBASIC3.73□□□□□ -1.81
RaraP11416 Gm26005-201ENSMUST00000158802 134 ntBASIC3.73□□□□□ -1.81
RaraP11416 Gm22775-201ENSMUST00000177630 120 ntBASIC3.73□□□□□ -1.81
RaraP11416 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RaraP11416 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RaraP11416 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RaraP11416 Gm17522-201ENSMUST00000178144 498 ntBASIC3.73□□□□□ -1.81
RaraP11416 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RaraP11416 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RaraP11416 Gm23569-201ENSMUST00000180120 120 ntBASIC3.73□□□□□ -1.81
RaraP11416 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.73□□□□□ -1.81
RaraP11416 CT030645.1-201ENSMUST00000224020 231 ntBASIC3.73□□□□□ -1.81
RaraP11416 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RaraP11416 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RaraP11416 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
RaraP11416 Gm42862-201ENSMUST00000197494 2621 ntBASIC3.73□□□□□ -1.81
RaraP11416 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.73□□□□□ -1.81
RaraP11416 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
RaraP11416 Gm22713-201ENSMUST00000116895 130 ntBASIC3.72□□□□□ -1.81
RaraP11416 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC3.72□□□□□ -1.81
RaraP11416 Gm12897-201ENSMUST00000120341 250 ntBASIC3.72□□□□□ -1.81
RaraP11416 Gm25572-201ENSMUST00000157527 172 ntBASIC3.72□□□□□ -1.81
RaraP11416 Gm17161-201ENSMUST00000169187 524 ntBASIC3.72□□□□□ -1.81
RaraP11416 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.72□□□□□ -1.81
RaraP11416 Gm10172-201ENSMUST00000085929 558 ntBASIC3.72□□□□□ -1.81
RaraP11416 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
RaraP11416 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RaraP11416 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RaraP11416 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RaraP11416 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RaraP11416 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
RaraP11416 Gm25376-201ENSMUST00000104340 133 ntBASIC3.71□□□□□ -1.82
RaraP11416 Gm12335-201ENSMUST00000119738 327 ntBASIC3.71□□□□□ -1.82
RaraP11416 Gm24141-201ENSMUST00000122776 115 ntBASIC3.71□□□□□ -1.82
RaraP11416 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.71□□□□□ -1.82
RaraP11416 Gm22553-201ENSMUST00000157797 295 ntBASIC3.71□□□□□ -1.82
RaraP11416 Gm22521-201ENSMUST00000158272 134 ntBASIC3.71□□□□□ -1.82
RaraP11416 Gm24553-201ENSMUST00000158653 131 ntBASIC3.71□□□□□ -1.82
RaraP11416 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
RaraP11416 Gm28030-201ENSMUST00000184987 138 ntBASIC3.71□□□□□ -1.82
RaraP11416 Gm37104-201ENSMUST00000193278 196 ntBASIC3.71□□□□□ -1.82
RaraP11416 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.71□□□□□ -1.82
RaraP11416 Mir29b-2-201ENSMUST00000083478 81 ntBASIC3.71□□□□□ -1.82
RaraP11416 Gm23947-201ENSMUST00000093636 107 ntBASIC3.71□□□□□ -1.82
RaraP11416 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RaraP11416 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
RaraP11416 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.71□□□□□ -1.82
RaraP11416 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
RaraP11416 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.71□□□□□ -1.82
RaraP11416 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
RaraP11416 Gm26135-201ENSMUST00000101993 72 ntBASIC3.7□□□□□ -1.82
RaraP11416 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
RaraP11416 Gm13314-201ENSMUST00000118742 335 ntBASIC3.7□□□□□ -1.82
RaraP11416 Gm15861-201ENSMUST00000120979 339 ntBASIC3.7□□□□□ -1.82
RaraP11416 Gm26157-201ENSMUST00000158974 126 ntBASIC3.7□□□□□ -1.82
RaraP11416 Snord50b-201ENSMUST00000178497 72 ntBASIC3.7□□□□□ -1.82
RaraP11416 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RaraP11416 Gm28992-201ENSMUST00000190534 139 ntBASIC3.7□□□□□ -1.82
RaraP11416 Gm36964-201ENSMUST00000191876 198 ntBASIC3.7□□□□□ -1.82
RaraP11416 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 290 ms