Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm25371-201ENSMUST00000158162 101 ntBASIC1.86□□□□□ -2.11
Lire1P11260 Mir669n-201ENSMUST00000158636 54 ntBASIC1.86□□□□□ -2.11
Lire1P11260 Gm25836-201ENSMUST00000158918 123 ntBASIC1.86□□□□□ -2.11
Lire1P11260 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.86□□□□□ -2.11
Lire1P11260 Mir3057-201ENSMUST00000175040 91 ntBASIC1.86□□□□□ -2.11
Lire1P11260 Gm24084-201ENSMUST00000175173 137 ntBASIC1.86□□□□□ -2.11
Lire1P11260 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Lire1P11260 Gm25936-201ENSMUST00000179952 114 ntBASIC1.86□□□□□ -2.11
Lire1P11260 Gm27013-201ENSMUST00000182441 1024 ntBASIC1.86□□□□□ -2.11
Lire1P11260 Mir6950-201ENSMUST00000184438 73 ntBASIC1.86□□□□□ -2.11
Lire1P11260 Gm44830-201ENSMUST00000207667 584 ntBASIC1.86□□□□□ -2.11
Lire1P11260 AC192616.1-201ENSMUST00000221922 132 ntBASIC1.86□□□□□ -2.11
Lire1P11260 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Lire1P11260 Gm24977-201ENSMUST00000083106 163 ntBASIC1.86□□□□□ -2.11
Lire1P11260 Mir374b-201ENSMUST00000102314 95 ntBASIC1.85□□□□□ -2.11
Lire1P11260 Gm25938-201ENSMUST00000104139 166 ntBASIC1.85□□□□□ -2.11
Lire1P11260 Gm26149-201ENSMUST00000157432 108 ntBASIC1.85□□□□□ -2.11
Lire1P11260 Gm22843-201ENSMUST00000157710 134 ntBASIC1.85□□□□□ -2.11
Lire1P11260 Gm22315-201ENSMUST00000158010 143 ntBASIC1.85□□□□□ -2.11
Lire1P11260 Gm22727-201ENSMUST00000158090 116 ntBASIC1.85□□□□□ -2.11
Lire1P11260 Gm24901-201ENSMUST00000158125 110 ntBASIC1.85□□□□□ -2.11
Lire1P11260 Gm24677-201ENSMUST00000158755 150 ntBASIC1.85□□□□□ -2.11
Lire1P11260 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.85□□□□□ -2.11
Lire1P11260 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.85□□□□□ -2.11
Lire1P11260 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.85□□□□□ -2.11
Lire1P11260 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.85□□□□□ -2.11
Lire1P11260 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.85□□□□□ -2.11
Lire1P11260 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.85□□□□□ -2.11
Lire1P11260 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.85□□□□□ -2.11
Lire1P11260 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.85□□□□□ -2.11
Lire1P11260 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Lire1P11260 Mir6419-201ENSMUST00000184784 113 ntBASIC1.85□□□□□ -2.11
Lire1P11260 Gm29352-201ENSMUST00000188054 544 ntBASIC1.85□□□□□ -2.11
Lire1P11260 Gm9156-201ENSMUST00000189660 463 ntBASIC1.85□□□□□ -2.11
Lire1P11260 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.85□□□□□ -2.11
Lire1P11260 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.85□□□□□ -2.11
Lire1P11260 Gm25586-201ENSMUST00000082499 112 ntBASIC1.85□□□□□ -2.11
Lire1P11260 Gm25859-201ENSMUST00000083710 91 ntBASIC1.85□□□□□ -2.11
Lire1P11260 Gm25896-201ENSMUST00000083713 136 ntBASIC1.85□□□□□ -2.11
Lire1P11260 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Lire1P11260 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
Lire1P11260 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.84□□□□□ -2.11
Lire1P11260 Gm15861-201ENSMUST00000120979 339 ntBASIC1.84□□□□□ -2.11
Lire1P11260 Gm26424-201ENSMUST00000122530 104 ntBASIC1.84□□□□□ -2.11
Lire1P11260 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Lire1P11260 Gm26278-201ENSMUST00000157098 132 ntBASIC1.84□□□□□ -2.11
Lire1P11260 Gm23090-201ENSMUST00000177331 78 ntBASIC1.84□□□□□ -2.11
Lire1P11260 Gm27898-201ENSMUST00000183987 80 ntBASIC1.84□□□□□ -2.11
Lire1P11260 Gm8151-201ENSMUST00000184817 871 ntBASIC1.84□□□□□ -2.11
Lire1P11260 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.84□□□□□ -2.11
Lire1P11260 Gm29350-201ENSMUST00000189141 541 ntBASIC1.84□□□□□ -2.11
Lire1P11260 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.84□□□□□ -2.11
Lire1P11260 Gm23448-201ENSMUST00000083151 104 ntBASIC1.84□□□□□ -2.11
Lire1P11260 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Lire1P11260 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Lire1P11260 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Lire1P11260 Gm22386-201ENSMUST00000158192 129 ntBASIC1.83□□□□□ -2.12
Lire1P11260 Gm22891-201ENSMUST00000158641 164 ntBASIC1.83□□□□□ -2.12
Lire1P11260 Gm24229-201ENSMUST00000158830 118 ntBASIC1.83□□□□□ -2.12
Lire1P11260 Gm28453-203ENSMUST00000187041 189 ntBASIC1.83□□□□□ -2.12
Lire1P11260 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.83□□□□□ -2.12
Lire1P11260 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.83□□□□□ -2.12
Lire1P11260 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Lire1P11260 Gm44181-201ENSMUST00000203106 483 ntBASIC1.83□□□□□ -2.12
Lire1P11260 Gm44429-201ENSMUST00000203542 186 ntBASIC1.83□□□□□ -2.12
Lire1P11260 Gm44336-201ENSMUST00000203696 468 ntBASIC1.83□□□□□ -2.12
Lire1P11260 Gm45207-201ENSMUST00000207469 145 ntBASIC1.83□□□□□ -2.12
Lire1P11260 Gm44654-201ENSMUST00000208052 329 ntBASIC1.83□□□□□ -2.12
Lire1P11260 Gm46312-201ENSMUST00000220961 420 ntBASIC1.83□□□□□ -2.12
Lire1P11260 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.83□□□□□ -2.12
Lire1P11260 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.83□□□□□ -2.12
Lire1P11260 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Lire1P11260 Snord14a-201ENSMUST00000082807 87 ntBASIC1.83□□□□□ -2.12
Lire1P11260 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Lire1P11260 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Lire1P11260 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.82□□□□□ -2.12
Lire1P11260 Gm23109-201ENSMUST00000116867 126 ntBASIC1.82□□□□□ -2.12
Lire1P11260 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Lire1P11260 Gm23557-201ENSMUST00000157820 138 ntBASIC1.82□□□□□ -2.12
Lire1P11260 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Lire1P11260 Gm23289-201ENSMUST00000175615 108 ntBASIC1.82□□□□□ -2.12
Lire1P11260 Gm22263-201ENSMUST00000180060 104 ntBASIC1.82□□□□□ -2.12
Lire1P11260 Gm28912-201ENSMUST00000189001 234 ntBASIC1.82□□□□□ -2.12
Lire1P11260 Gm37658-201ENSMUST00000192672 315 ntBASIC1.82□□□□□ -2.12
Lire1P11260 Gm44308-201ENSMUST00000197080 99 ntBASIC1.82□□□□□ -2.12
Lire1P11260 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.82□□□□□ -2.12
Lire1P11260 Gm45296-201ENSMUST00000209625 205 ntBASIC1.82□□□□□ -2.12
Lire1P11260 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.82□□□□□ -2.12
Lire1P11260 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.82□□□□□ -2.12
Lire1P11260 Gm22972-201ENSMUST00000083297 131 ntBASIC1.82□□□□□ -2.12
Lire1P11260 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
Lire1P11260 Gm24282-201ENSMUST00000104232 66 ntBASIC1.81□□□□□ -2.12
Lire1P11260 Gm26345-201ENSMUST00000157534 120 ntBASIC1.81□□□□□ -2.12
Lire1P11260 Gm22316-201ENSMUST00000158012 216 ntBASIC1.81□□□□□ -2.12
Lire1P11260 Gm23854-201ENSMUST00000158378 108 ntBASIC1.81□□□□□ -2.12
Lire1P11260 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.81□□□□□ -2.12
Lire1P11260 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.81□□□□□ -2.12
Lire1P11260 Gm24315-201ENSMUST00000177835 127 ntBASIC1.81□□□□□ -2.12
Lire1P11260 Gm27517-201ENSMUST00000184347 236 ntBASIC1.81□□□□□ -2.12
Lire1P11260 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms