Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
ApoeP08226 Gm20438-201ENSMUST00000174441 329 ntBASIC1.45□□□□□ -2.18
ApoeP08226 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.45□□□□□ -2.18
ApoeP08226 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.45□□□□□ -2.18
ApoeP08226 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
ApoeP08226 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.45□□□□□ -2.18
ApoeP08226 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
ApoeP08226 Gm45815-201ENSMUST00000220241 146 ntBASIC1.45□□□□□ -2.18
ApoeP08226 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
ApoeP08226 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
ApoeP08226 Gm22654-201ENSMUST00000157874 105 ntBASIC1.44□□□□□ -2.18
ApoeP08226 Gm22768-201ENSMUST00000158366 153 ntBASIC1.44□□□□□ -2.18
ApoeP08226 Mir6993-201ENSMUST00000184912 65 ntBASIC1.44□□□□□ -2.18
ApoeP08226 Gm27919-201ENSMUST00000185163 107 ntBASIC1.44□□□□□ -2.18
ApoeP08226 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
ApoeP08226 Ighv1-28-201ENSMUST00000192987 351 ntBASIC1.44□□□□□ -2.18
ApoeP08226 Gm44337-201ENSMUST00000196553 114 ntBASIC1.44□□□□□ -2.18
ApoeP08226 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.44□□□□□ -2.18
ApoeP08226 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.44□□□□□ -2.18
ApoeP08226 Ear14-201ENSMUST00000049559 468 ntBASIC1.44□□□□□ -2.18
ApoeP08226 Gm24035-201ENSMUST00000082867 107 ntBASIC1.44□□□□□ -2.18
ApoeP08226 Mir429-201ENSMUST00000083493 83 ntBASIC1.44□□□□□ -2.18
ApoeP08226 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
ApoeP08226 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.44□□□□□ -2.18
ApoeP08226 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.43□□□□□ -2.18
ApoeP08226 Gm26249-201ENSMUST00000116708 118 ntBASIC1.43□□□□□ -2.18
ApoeP08226 Gm15115-201ENSMUST00000121145 264 ntBASIC1.43□□□□□ -2.18
ApoeP08226 Gm24895-201ENSMUST00000122742 74 ntBASIC1.43□□□□□ -2.18
ApoeP08226 Gm24262-201ENSMUST00000157431 144 ntBASIC1.43□□□□□ -2.18
ApoeP08226 Gm24438-201ENSMUST00000157893 115 ntBASIC1.43□□□□□ -2.18
ApoeP08226 Gm23221-201ENSMUST00000158118 93 ntBASIC1.43□□□□□ -2.18
ApoeP08226 Gm17113-201ENSMUST00000170118 171 ntBASIC1.43□□□□□ -2.18
ApoeP08226 Gm18588-201ENSMUST00000177308 492 ntBASIC1.43□□□□□ -2.18
ApoeP08226 Gm23379-201ENSMUST00000180026 107 ntBASIC1.43□□□□□ -2.18
ApoeP08226 Mir7679-201ENSMUST00000183379 63 ntBASIC1.43□□□□□ -2.18
ApoeP08226 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
ApoeP08226 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
ApoeP08226 Gm29657-201ENSMUST00000189807 342 ntBASIC1.43□□□□□ -2.18
ApoeP08226 Gm18546-201ENSMUST00000197245 676 ntBASIC1.43□□□□□ -2.18
ApoeP08226 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
ApoeP08226 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.43□□□□□ -2.18
ApoeP08226 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.43□□□□□ -2.18
ApoeP08226 Mir340-201ENSMUST00000083483 98 ntBASIC1.43□□□□□ -2.18
ApoeP08226 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.43□□□□□ -2.18
ApoeP08226 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
ApoeP08226 Gm13720-201ENSMUST00000120741 196 ntBASIC1.42□□□□□ -2.18
ApoeP08226 Gm15536-201ENSMUST00000121411 114 ntBASIC1.42□□□□□ -2.18
ApoeP08226 Gm6025-201ENSMUST00000121517 201 ntBASIC1.42□□□□□ -2.18
ApoeP08226 Gm13433-201ENSMUST00000121701 240 ntBASIC1.42□□□□□ -2.18
ApoeP08226 Gm24598-201ENSMUST00000122510 74 ntBASIC1.42□□□□□ -2.18
ApoeP08226 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.42□□□□□ -2.18
ApoeP08226 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.42□□□□□ -2.18
ApoeP08226 Gm22316-201ENSMUST00000158012 216 ntBASIC1.42□□□□□ -2.18
ApoeP08226 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.42□□□□□ -2.18
ApoeP08226 Gm5001-201ENSMUST00000204361 331 ntBASIC1.42□□□□□ -2.18
ApoeP08226 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.42□□□□□ -2.18
ApoeP08226 Gm22834-201ENSMUST00000102021 79 ntBASIC1.41□□□□□ -2.18
ApoeP08226 Gm22713-201ENSMUST00000116895 130 ntBASIC1.41□□□□□ -2.18
ApoeP08226 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.41□□□□□ -2.18
ApoeP08226 Gm22841-201ENSMUST00000158443 62 ntBASIC1.41□□□□□ -2.18
ApoeP08226 Gm24577-201ENSMUST00000158580 63 ntBASIC1.41□□□□□ -2.18
ApoeP08226 Gm26024-201ENSMUST00000158657 322 ntBASIC1.41□□□□□ -2.18
ApoeP08226 Gm23181-201ENSMUST00000158685 110 ntBASIC1.41□□□□□ -2.18
ApoeP08226 Gm16038-201ENSMUST00000159317 193 ntBASIC1.41□□□□□ -2.18
ApoeP08226 Mir3057-201ENSMUST00000175040 91 ntBASIC1.41□□□□□ -2.18
ApoeP08226 Gm28597-201ENSMUST00000187664 666 ntBASIC1.41□□□□□ -2.18
ApoeP08226 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.41□□□□□ -2.18
ApoeP08226 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
ApoeP08226 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.41□□□□□ -2.18
ApoeP08226 Mir1291-201ENSMUST00000199842 117 ntBASIC1.41□□□□□ -2.18
ApoeP08226 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.41□□□□□ -2.18
ApoeP08226 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.41□□□□□ -2.18
ApoeP08226 Gm44655-201ENSMUST00000207768 423 ntBASIC1.41□□□□□ -2.18
ApoeP08226 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.41□□□□□ -2.18
ApoeP08226 AC147101.1-201ENSMUST00000217964 312 ntBASIC1.41□□□□□ -2.18
ApoeP08226 Gm19441-201ENSMUST00000221545 330 ntBASIC1.41□□□□□ -2.18
ApoeP08226 Snora34-201ENSMUST00000083402 138 ntBASIC1.41□□□□□ -2.18
ApoeP08226 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
ApoeP08226 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
ApoeP08226 Mir1195-201ENSMUST00000116818 98 ntBASIC1.4□□□□□ -2.19
ApoeP08226 Gm22193-201ENSMUST00000116868 76 ntBASIC1.4□□□□□ -2.19
ApoeP08226 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC1.4□□□□□ -2.19
ApoeP08226 Gm24551-201ENSMUST00000158645 92 ntBASIC1.4□□□□□ -2.19
ApoeP08226 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.4□□□□□ -2.19
ApoeP08226 Gm22308-201ENSMUST00000177609 107 ntBASIC1.4□□□□□ -2.19
ApoeP08226 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
ApoeP08226 Gm22862-201ENSMUST00000178593 121 ntBASIC1.4□□□□□ -2.19
ApoeP08226 Gm25936-201ENSMUST00000179952 114 ntBASIC1.4□□□□□ -2.19
ApoeP08226 Mir7683-201ENSMUST00000183842 61 ntBASIC1.4□□□□□ -2.19
ApoeP08226 Gm27817-201ENSMUST00000184302 233 ntBASIC1.4□□□□□ -2.19
ApoeP08226 Gm43487-201ENSMUST00000200331 1031 ntBASIC1.4□□□□□ -2.19
ApoeP08226 Gm45116-201ENSMUST00000207392 275 ntBASIC1.4□□□□□ -2.19
ApoeP08226 Gm23515-201ENSMUST00000082829 107 ntBASIC1.4□□□□□ -2.19
ApoeP08226 Gm23100-201ENSMUST00000083455 141 ntBASIC1.4□□□□□ -2.19
ApoeP08226 Gm25207-201ENSMUST00000093745 107 ntBASIC1.4□□□□□ -2.19
ApoeP08226 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.39□□□□□ -2.19
ApoeP08226 Gm24338-201ENSMUST00000104205 127 ntBASIC1.39□□□□□ -2.19
ApoeP08226 Gm17132-201ENSMUST00000109542 1158 ntBASIC1.39□□□□□ -2.19
ApoeP08226 Gm14355-201ENSMUST00000117352 264 ntBASIC1.39□□□□□ -2.19
ApoeP08226 Gm14364-201ENSMUST00000129209 267 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms