Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm22843-201ENSMUST00000157710 134 ntBASIC2.5□□□□□ -2.01
Smarce1O54941 Gm24816-201ENSMUST00000175311 151 ntBASIC2.5□□□□□ -2.01
Smarce1O54941 Gm25457-201ENSMUST00000179509 107 ntBASIC2.5□□□□□ -2.01
Smarce1O54941 Mir6951-201ENSMUST00000183910 75 ntBASIC2.5□□□□□ -2.01
Smarce1O54941 Gm37557-201ENSMUST00000191640 139 ntBASIC2.5□□□□□ -2.01
Smarce1O54941 Gm45673-201ENSMUST00000210293 358 ntBASIC2.5□□□□□ -2.01
Smarce1O54941 Gm6796-201ENSMUST00000211919 243 ntBASIC2.5□□□□□ -2.01
Smarce1O54941 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.5□□□□□ -2.01
Smarce1O54941 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.5□□□□□ -2.01
Smarce1O54941 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.5□□□□□ -2.01
Smarce1O54941 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.5□□□□□ -2.01
Smarce1O54941 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.5□□□□□ -2.01
Smarce1O54941 Gm22978-201ENSMUST00000082607 160 ntBASIC2.5□□□□□ -2.01
Smarce1O54941 Gm25651-201ENSMUST00000083782 119 ntBASIC2.5□□□□□ -2.01
Smarce1O54941 Gm25512-201ENSMUST00000083863 107 ntBASIC2.5□□□□□ -2.01
Smarce1O54941 Gm23041-201ENSMUST00000083868 106 ntBASIC2.5□□□□□ -2.01
Smarce1O54941 Mir127-201ENSMUST00000093568 70 ntBASIC2.5□□□□□ -2.01
Smarce1O54941 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Smarce1O54941 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.49□□□□□ -2.01
Smarce1O54941 Gm25781-201ENSMUST00000122527 84 ntBASIC2.49□□□□□ -2.01
Smarce1O54941 Gm23120-201ENSMUST00000157654 287 ntBASIC2.49□□□□□ -2.01
Smarce1O54941 Gm24237-201ENSMUST00000157790 132 ntBASIC2.49□□□□□ -2.01
Smarce1O54941 Gm22554-201ENSMUST00000157798 147 ntBASIC2.49□□□□□ -2.01
Smarce1O54941 Gm24388-201ENSMUST00000177872 107 ntBASIC2.49□□□□□ -2.01
Smarce1O54941 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.49□□□□□ -2.01
Smarce1O54941 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Smarce1O54941 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.49□□□□□ -2.01
Smarce1O54941 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.49□□□□□ -2.01
Smarce1O54941 Mir496a-201ENSMUST00000093627 79 ntBASIC2.49□□□□□ -2.01
Smarce1O54941 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.49□□□□□ -2.01
Smarce1O54941 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
Smarce1O54941 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.48□□□□□ -2.01
Smarce1O54941 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.48□□□□□ -2.01
Smarce1O54941 Gm26400-201ENSMUST00000175012 85 ntBASIC2.48□□□□□ -2.01
Smarce1O54941 Gm24487-201ENSMUST00000178017 63 ntBASIC2.48□□□□□ -2.01
Smarce1O54941 Mir6399-201ENSMUST00000184050 84 ntBASIC2.48□□□□□ -2.01
Smarce1O54941 Mir7016-201ENSMUST00000184308 72 ntBASIC2.48□□□□□ -2.01
Smarce1O54941 Gm37313-201ENSMUST00000191673 290 ntBASIC2.48□□□□□ -2.01
Smarce1O54941 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC2.48□□□□□ -2.01
Smarce1O54941 Gm37404-201ENSMUST00000195726 359 ntBASIC2.48□□□□□ -2.01
Smarce1O54941 Gm45791-201ENSMUST00000212908 352 ntBASIC2.48□□□□□ -2.01
Smarce1O54941 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.48□□□□□ -2.01
Smarce1O54941 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.48□□□□□ -2.01
Smarce1O54941 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.48□□□□□ -2.01
Smarce1O54941 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
Smarce1O54941 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Smarce1O54941 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Smarce1O54941 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Smarce1O54941 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Smarce1O54941 Gm22782-201ENSMUST00000104082 132 ntBASIC2.47□□□□□ -2.01
Smarce1O54941 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.47□□□□□ -2.01
Smarce1O54941 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.47□□□□□ -2.01
Smarce1O54941 Gm23324-201ENSMUST00000157421 131 ntBASIC2.47□□□□□ -2.01
Smarce1O54941 Gm24726-201ENSMUST00000158232 121 ntBASIC2.47□□□□□ -2.01
Smarce1O54941 Gm21978-201ENSMUST00000179696 377 ntBASIC2.47□□□□□ -2.01
Smarce1O54941 Gm28418-201ENSMUST00000186179 423 ntBASIC2.47□□□□□ -2.01
Smarce1O54941 Gm44654-201ENSMUST00000208052 329 ntBASIC2.47□□□□□ -2.01
Smarce1O54941 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Smarce1O54941 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.47□□□□□ -2.01
Smarce1O54941 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.47□□□□□ -2.01
Smarce1O54941 Gm23731-201ENSMUST00000083749 107 ntBASIC2.47□□□□□ -2.01
Smarce1O54941 Gm25937-201ENSMUST00000083912 107 ntBASIC2.47□□□□□ -2.01
Smarce1O54941 Gm24817-201ENSMUST00000093672 105 ntBASIC2.47□□□□□ -2.01
Smarce1O54941 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Smarce1O54941 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
Smarce1O54941 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.47□□□□□ -2.01
Smarce1O54941 Gm23142-201ENSMUST00000101848 105 ntBASIC2.46□□□□□ -2.02
Smarce1O54941 Gm26240-201ENSMUST00000101893 105 ntBASIC2.46□□□□□ -2.02
Smarce1O54941 Gm15010-201ENSMUST00000117153 407 ntBASIC2.46□□□□□ -2.02
Smarce1O54941 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC2.46□□□□□ -2.02
Smarce1O54941 Gm24010-201ENSMUST00000157731 282 ntBASIC2.46□□□□□ -2.02
Smarce1O54941 Gm25012-201ENSMUST00000158396 164 ntBASIC2.46□□□□□ -2.02
Smarce1O54941 Gm23342-201ENSMUST00000158958 115 ntBASIC2.46□□□□□ -2.02
Smarce1O54941 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Smarce1O54941 Mir6916-201ENSMUST00000184514 63 ntBASIC2.46□□□□□ -2.02
Smarce1O54941 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Smarce1O54941 Gm26111-201ENSMUST00000083969 106 ntBASIC2.46□□□□□ -2.02
Smarce1O54941 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Smarce1O54941 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Smarce1O54941 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Smarce1O54941 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Smarce1O54941 Gm11859-201ENSMUST00000118099 455 ntBASIC2.45□□□□□ -2.02
Smarce1O54941 Gm25543-201ENSMUST00000122678 312 ntBASIC2.45□□□□□ -2.02
Smarce1O54941 Gm16362-201ENSMUST00000135189 214 ntBASIC2.45□□□□□ -2.02
Smarce1O54941 Gm16358-201ENSMUST00000146046 210 ntBASIC2.45□□□□□ -2.02
Smarce1O54941 Gm23779-201ENSMUST00000157938 64 ntBASIC2.45□□□□□ -2.02
Smarce1O54941 Gm22316-201ENSMUST00000158012 216 ntBASIC2.45□□□□□ -2.02
Smarce1O54941 Gm22113-201ENSMUST00000158343 104 ntBASIC2.45□□□□□ -2.02
Smarce1O54941 Gm17100-201ENSMUST00000168963 272 ntBASIC2.45□□□□□ -2.02
Smarce1O54941 Gm24304-201ENSMUST00000177635 107 ntBASIC2.45□□□□□ -2.02
Smarce1O54941 Gm23860-201ENSMUST00000179446 132 ntBASIC2.45□□□□□ -2.02
Smarce1O54941 Gm42578-201ENSMUST00000199960 194 ntBASIC2.45□□□□□ -2.02
Smarce1O54941 Gm44960-201ENSMUST00000207403 141 ntBASIC2.45□□□□□ -2.02
Smarce1O54941 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.45□□□□□ -2.02
Smarce1O54941 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.45□□□□□ -2.02
Smarce1O54941 Gm25079-201ENSMUST00000082529 203 ntBASIC2.45□□□□□ -2.02
Smarce1O54941 Gm26265-201ENSMUST00000083277 135 ntBASIC2.45□□□□□ -2.02
Smarce1O54941 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.45□□□□□ -2.02
Smarce1O54941 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Smarce1O54941 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 108.6 ms