Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm28861-201ENSMUST00000189681 315 ntBASIC0.63□□□□□ -2.31
Hmgb3O54879 Gm28717-201ENSMUST00000189950 315 ntBASIC0.63□□□□□ -2.31
Hmgb3O54879 Gm29180-201ENSMUST00000190003 315 ntBASIC0.63□□□□□ -2.31
Hmgb3O54879 Gm29575-201ENSMUST00000190597 315 ntBASIC0.63□□□□□ -2.31
Hmgb3O54879 Gm29631-201ENSMUST00000191065 315 ntBASIC0.63□□□□□ -2.31
Hmgb3O54879 Gm28160-201ENSMUST00000191229 315 ntBASIC0.63□□□□□ -2.31
Hmgb3O54879 Gm29469-201ENSMUST00000191448 315 ntBASIC0.63□□□□□ -2.31
Hmgb3O54879 Gm37658-201ENSMUST00000192672 315 ntBASIC0.63□□□□□ -2.31
Hmgb3O54879 Gm36984-201ENSMUST00000192770 235 ntBASIC0.63□□□□□ -2.31
Hmgb3O54879 Gm37757-201ENSMUST00000193072 210 ntBASIC0.63□□□□□ -2.31
Hmgb3O54879 Gm38113-201ENSMUST00000193704 201 ntBASIC0.63□□□□□ -2.31
Hmgb3O54879 Gm37129-201ENSMUST00000195791 315 ntBASIC0.63□□□□□ -2.31
Hmgb3O54879 AC134335.1-201ENSMUST00000227626 329 ntBASIC0.63□□□□□ -2.31
Hmgb3O54879 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.63□□□□□ -2.31
Hmgb3O54879 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
Hmgb3O54879 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Hmgb3O54879 AC124426.1-203ENSMUST00000221814 1362 ntBASIC0.62□□□□□ -2.31
Hmgb3O54879 Mir343-201ENSMUST00000102360 75 ntBASIC0.62□□□□□ -2.31
Hmgb3O54879 Gm23705-201ENSMUST00000104370 130 ntBASIC0.62□□□□□ -2.31
Hmgb3O54879 Mir466n-201ENSMUST00000104798 94 ntBASIC0.62□□□□□ -2.31
Hmgb3O54879 Gm25544-201ENSMUST00000122676 120 ntBASIC0.62□□□□□ -2.31
Hmgb3O54879 Gm24385-201ENSMUST00000122694 350 ntBASIC0.62□□□□□ -2.31
Hmgb3O54879 n-R5s150-201ENSMUST00000122705 108 ntBASIC0.62□□□□□ -2.31
Hmgb3O54879 Gm25371-201ENSMUST00000158162 101 ntBASIC0.62□□□□□ -2.31
Hmgb3O54879 Gm20386-201ENSMUST00000174010 132 ntBASIC0.62□□□□□ -2.31
Hmgb3O54879 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Hmgb3O54879 Gm44491-201ENSMUST00000196794 96 ntBASIC0.62□□□□□ -2.31
Hmgb3O54879 Gm18617-201ENSMUST00000222311 259 ntBASIC0.62□□□□□ -2.31
Hmgb3O54879 Gm23735-201ENSMUST00000082551 134 ntBASIC0.62□□□□□ -2.31
Hmgb3O54879 Gm23453-201ENSMUST00000083326 106 ntBASIC0.62□□□□□ -2.31
Hmgb3O54879 Mir452-201ENSMUST00000093629 85 ntBASIC0.62□□□□□ -2.31
Hmgb3O54879 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Hmgb3O54879 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC0.62□□□□□ -2.31
Hmgb3O54879 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.61□□□□□ -2.31
Hmgb3O54879 Gm23951-201ENSMUST00000104029 132 ntBASIC0.61□□□□□ -2.31
Hmgb3O54879 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC0.61□□□□□ -2.31
Hmgb3O54879 Gm13368-201ENSMUST00000122443 430 ntBASIC0.61□□□□□ -2.31
Hmgb3O54879 Gm25269-201ENSMUST00000122601 104 ntBASIC0.61□□□□□ -2.31
Hmgb3O54879 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC0.61□□□□□ -2.31
Hmgb3O54879 Gm24481-201ENSMUST00000157210 102 ntBASIC0.61□□□□□ -2.31
Hmgb3O54879 Gm23120-201ENSMUST00000157654 287 ntBASIC0.61□□□□□ -2.31
Hmgb3O54879 Gm24439-201ENSMUST00000157894 117 ntBASIC0.61□□□□□ -2.31
Hmgb3O54879 Gm25768-201ENSMUST00000158570 98 ntBASIC0.61□□□□□ -2.31
Hmgb3O54879 Gm2878-201ENSMUST00000170173 486 ntBASIC0.61□□□□□ -2.31
Hmgb3O54879 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Hmgb3O54879 Gm23862-201ENSMUST00000180342 94 ntBASIC0.61□□□□□ -2.31
Hmgb3O54879 Gm42805-201ENSMUST00000196158 276 ntBASIC0.61□□□□□ -2.31
Hmgb3O54879 Gm20102-201ENSMUST00000222445 220 ntBASIC0.61□□□□□ -2.31
Hmgb3O54879 Gm23390-201ENSMUST00000157393 106 ntBASIC0.6□□□□□ -2.31
Hmgb3O54879 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC0.6□□□□□ -2.31
Hmgb3O54879 Gm21815-201ENSMUST00000178213 664 ntBASIC0.6□□□□□ -2.31
Hmgb3O54879 Gm22633-201ENSMUST00000179834 107 ntBASIC0.6□□□□□ -2.31
Hmgb3O54879 Gm28011-201ENSMUST00000184097 175 ntBASIC0.6□□□□□ -2.31
Hmgb3O54879 Trav5d-2-201ENSMUST00000196107 275 ntBASIC0.6□□□□□ -2.31
Hmgb3O54879 Trav5n-2-201ENSMUST00000197136 275 ntBASIC0.6□□□□□ -2.31
Hmgb3O54879 Gm44408-201ENSMUST00000200205 66 ntBASIC0.6□□□□□ -2.31
Hmgb3O54879 Gm45232-201ENSMUST00000207811 162 ntBASIC0.6□□□□□ -2.31
Hmgb3O54879 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC0.6□□□□□ -2.31
Hmgb3O54879 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.6□□□□□ -2.31
Hmgb3O54879 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
Hmgb3O54879 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
Hmgb3O54879 Gm10264-201ENSMUST00000220589 429 ntBASIC0.6□□□□□ -2.31
Hmgb3O54879 Snora34-201ENSMUST00000083402 138 ntBASIC0.6□□□□□ -2.31
Hmgb3O54879 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.59□□□□□ -2.31
Hmgb3O54879 Gm12512-201ENSMUST00000119620 217 ntBASIC0.59□□□□□ -2.31
Hmgb3O54879 Gm14765-201ENSMUST00000121954 326 ntBASIC0.59□□□□□ -2.31
Hmgb3O54879 Gm22584-201ENSMUST00000177935 92 ntBASIC0.59□□□□□ -2.31
Hmgb3O54879 Gm27421-201ENSMUST00000184729 167 ntBASIC0.59□□□□□ -2.31
Hmgb3O54879 Gm28794-201ENSMUST00000185276 136 ntBASIC0.59□□□□□ -2.31
Hmgb3O54879 Gm29005-201ENSMUST00000186773 320 ntBASIC0.59□□□□□ -2.31
Hmgb3O54879 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.59□□□□□ -2.31
Hmgb3O54879 Gm45590-201ENSMUST00000209715 262 ntBASIC0.59□□□□□ -2.31
Hmgb3O54879 AC156560.1-201ENSMUST00000221425 256 ntBASIC0.59□□□□□ -2.31
Hmgb3O54879 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.59□□□□□ -2.31
Hmgb3O54879 Mir27b-201ENSMUST00000083541 73 ntBASIC0.59□□□□□ -2.31
Hmgb3O54879 Gm22577-201ENSMUST00000083731 109 ntBASIC0.59□□□□□ -2.31
Hmgb3O54879 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
Hmgb3O54879 Gm13231-201ENSMUST00000119218 2850 ntBASIC0.59□□□□□ -2.32
Hmgb3O54879 Gm22193-201ENSMUST00000116868 76 ntBASIC0.58□□□□□ -2.32
Hmgb3O54879 Gm13396-201ENSMUST00000120617 271 ntBASIC0.58□□□□□ -2.32
Hmgb3O54879 Gm11389-201ENSMUST00000121407 430 ntBASIC0.58□□□□□ -2.32
Hmgb3O54879 Gm22664-201ENSMUST00000158719 105 ntBASIC0.58□□□□□ -2.32
Hmgb3O54879 Gm25956-201ENSMUST00000175115 217 ntBASIC0.58□□□□□ -2.32
Hmgb3O54879 Mir3061-201ENSMUST00000175129 91 ntBASIC0.58□□□□□ -2.32
Hmgb3O54879 Gm24897-201ENSMUST00000179033 107 ntBASIC0.58□□□□□ -2.32
Hmgb3O54879 Gm22263-201ENSMUST00000180060 104 ntBASIC0.58□□□□□ -2.32
Hmgb3O54879 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Hmgb3O54879 Gm29167-201ENSMUST00000190024 377 ntBASIC0.58□□□□□ -2.32
Hmgb3O54879 Gm37089-201ENSMUST00000195616 129 ntBASIC0.58□□□□□ -2.32
Hmgb3O54879 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.58□□□□□ -2.32
Hmgb3O54879 Gm42570-201ENSMUST00000195937 292 ntBASIC0.58□□□□□ -2.32
Hmgb3O54879 Gm43602-201ENSMUST00000196772 300 ntBASIC0.58□□□□□ -2.32
Hmgb3O54879 Gm44254-201ENSMUST00000204184 322 ntBASIC0.58□□□□□ -2.32
Hmgb3O54879 Gm8125-201ENSMUST00000216602 738 ntBASIC0.58□□□□□ -2.32
Hmgb3O54879 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.58□□□□□ -2.32
Hmgb3O54879 Gm18696-201ENSMUST00000220103 274 ntBASIC0.58□□□□□ -2.32
Hmgb3O54879 AC130829.3-201ENSMUST00000222735 154 ntBASIC0.58□□□□□ -2.32
Hmgb3O54879 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.58□□□□□ -2.32
Hmgb3O54879 Gm22508-201ENSMUST00000082772 110 ntBASIC0.58□□□□□ -2.32
Hmgb3O54879 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms