Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Gm25012-201ENSMUST00000158396 164 ntBASIC2.48□□□□□ -2.01
DffbO54788 Gm24736-201ENSMUST00000158862 130 ntBASIC2.48□□□□□ -2.01
DffbO54788 Gm26297-201ENSMUST00000179464 132 ntBASIC2.48□□□□□ -2.01
DffbO54788 Mir6386-201ENSMUST00000183558 104 ntBASIC2.48□□□□□ -2.01
DffbO54788 Gm27761-201ENSMUST00000184091 131 ntBASIC2.48□□□□□ -2.01
DffbO54788 Gm37085-201ENSMUST00000193780 196 ntBASIC2.48□□□□□ -2.01
DffbO54788 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.48□□□□□ -2.01
DffbO54788 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
DffbO54788 Gm6030-201ENSMUST00000078768 402 ntBASIC2.48□□□□□ -2.01
DffbO54788 mt-Ti-201ENSMUST00000082393 69 ntBASIC2.48□□□□□ -2.01
DffbO54788 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
DffbO54788 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.48□□□□□ -2.01
DffbO54788 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.48□□□□□ -2.01
DffbO54788 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
DffbO54788 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
DffbO54788 Gm12513-201ENSMUST00000118617 352 ntBASIC2.47□□□□□ -2.01
DffbO54788 Gm25945-201ENSMUST00000122484 135 ntBASIC2.47□□□□□ -2.01
DffbO54788 Gm22956-201ENSMUST00000122520 80 ntBASIC2.47□□□□□ -2.01
DffbO54788 Gm23325-201ENSMUST00000157422 129 ntBASIC2.47□□□□□ -2.01
DffbO54788 Gm22187-201ENSMUST00000157819 129 ntBASIC2.47□□□□□ -2.01
DffbO54788 Gm23542-201ENSMUST00000158208 96 ntBASIC2.47□□□□□ -2.01
DffbO54788 Gm22416-201ENSMUST00000158590 88 ntBASIC2.47□□□□□ -2.01
DffbO54788 Gm25718-201ENSMUST00000158632 118 ntBASIC2.47□□□□□ -2.01
DffbO54788 Gm25119-201ENSMUST00000158815 88 ntBASIC2.47□□□□□ -2.01
DffbO54788 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC2.47□□□□□ -2.01
DffbO54788 Gm44429-201ENSMUST00000203542 186 ntBASIC2.47□□□□□ -2.01
DffbO54788 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.47□□□□□ -2.01
DffbO54788 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.47□□□□□ -2.01
DffbO54788 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.47□□□□□ -2.01
DffbO54788 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.47□□□□□ -2.01
DffbO54788 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
DffbO54788 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
DffbO54788 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.46□□□□□ -2.02
DffbO54788 Gm12412-201ENSMUST00000121867 328 ntBASIC2.46□□□□□ -2.02
DffbO54788 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.46□□□□□ -2.02
DffbO54788 Gm25066-201ENSMUST00000158145 123 ntBASIC2.46□□□□□ -2.02
DffbO54788 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.46□□□□□ -2.02
DffbO54788 Snora15-201ENSMUST00000177461 131 ntBASIC2.46□□□□□ -2.02
DffbO54788 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.46□□□□□ -2.02
DffbO54788 Gm27700-201ENSMUST00000185003 81 ntBASIC2.46□□□□□ -2.02
DffbO54788 Gm2719-201ENSMUST00000191929 444 ntBASIC2.46□□□□□ -2.02
DffbO54788 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
DffbO54788 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
DffbO54788 Gm44600-201ENSMUST00000208540 111 ntBASIC2.46□□□□□ -2.02
DffbO54788 AC173482.4-201ENSMUST00000225096 348 ntBASIC2.46□□□□□ -2.02
DffbO54788 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.46□□□□□ -2.02
DffbO54788 Gm22978-201ENSMUST00000082607 160 ntBASIC2.46□□□□□ -2.02
DffbO54788 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.46□□□□□ -2.02
DffbO54788 Gm24522-201ENSMUST00000083964 108 ntBASIC2.46□□□□□ -2.02
DffbO54788 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.46□□□□□ -2.02
DffbO54788 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.46□□□□□ -2.02
DffbO54788 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
DffbO54788 Gm25168-201ENSMUST00000104189 132 ntBASIC2.45□□□□□ -2.02
DffbO54788 Gm26249-201ENSMUST00000116708 118 ntBASIC2.45□□□□□ -2.02
DffbO54788 Gm14774-201ENSMUST00000117857 536 ntBASIC2.45□□□□□ -2.02
DffbO54788 Gm26479-201ENSMUST00000122620 106 ntBASIC2.45□□□□□ -2.02
DffbO54788 Gm23895-201ENSMUST00000158108 160 ntBASIC2.45□□□□□ -2.02
DffbO54788 Gm27579-201ENSMUST00000158113 63 ntBASIC2.45□□□□□ -2.02
DffbO54788 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
DffbO54788 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.45□□□□□ -2.02
DffbO54788 Gm25020-201ENSMUST00000178071 107 ntBASIC2.45□□□□□ -2.02
DffbO54788 Gm21827-201ENSMUST00000178247 423 ntBASIC2.45□□□□□ -2.02
DffbO54788 Gm27220-201ENSMUST00000183453 262 ntBASIC2.45□□□□□ -2.02
DffbO54788 Gm28921-201ENSMUST00000190219 378 ntBASIC2.45□□□□□ -2.02
DffbO54788 Gm43991-201ENSMUST00000203751 274 ntBASIC2.45□□□□□ -2.02
DffbO54788 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC2.45□□□□□ -2.02
DffbO54788 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.45□□□□□ -2.02
DffbO54788 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.45□□□□□ -2.02
DffbO54788 Gm46389-201ENSMUST00000223199 392 ntBASIC2.45□□□□□ -2.02
DffbO54788 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.45□□□□□ -2.02
DffbO54788 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.45□□□□□ -2.02
DffbO54788 Gm9795-201ENSMUST00000062156 693 ntBASIC2.45□□□□□ -2.02
DffbO54788 Gm24356-201ENSMUST00000082859 106 ntBASIC2.45□□□□□ -2.02
DffbO54788 Gm22294-201ENSMUST00000083308 104 ntBASIC2.45□□□□□ -2.02
DffbO54788 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
DffbO54788 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.45□□□□□ -2.02
DffbO54788 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.45□□□□□ -2.02
DffbO54788 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
DffbO54788 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
DffbO54788 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
DffbO54788 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
DffbO54788 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
DffbO54788 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
DffbO54788 Mir466b-8-201ENSMUST00000103883 86 ntBASIC2.44□□□□□ -2.02
DffbO54788 Gm24116-201ENSMUST00000103975 107 ntBASIC2.44□□□□□ -2.02
DffbO54788 Gm6829-201ENSMUST00000119858 360 ntBASIC2.44□□□□□ -2.02
DffbO54788 Gm26027-201ENSMUST00000122725 268 ntBASIC2.44□□□□□ -2.02
DffbO54788 Gm14389-201ENSMUST00000140453 241 ntBASIC2.44□□□□□ -2.02
DffbO54788 Gm26099-201ENSMUST00000157248 109 ntBASIC2.44□□□□□ -2.02
DffbO54788 Gm25490-201ENSMUST00000158734 130 ntBASIC2.44□□□□□ -2.02
DffbO54788 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.44□□□□□ -2.02
DffbO54788 Gm23141-201ENSMUST00000178682 94 ntBASIC2.44□□□□□ -2.02
DffbO54788 Mir466e-201ENSMUST00000198862 84 ntBASIC2.44□□□□□ -2.02
DffbO54788 Mir466c-1-201ENSMUST00000200654 84 ntBASIC2.44□□□□□ -2.02
DffbO54788 Gm43932-201ENSMUST00000204499 52 ntBASIC2.44□□□□□ -2.02
DffbO54788 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.44□□□□□ -2.02
DffbO54788 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.44□□□□□ -2.02
DffbO54788 Gm23462-201ENSMUST00000083264 104 ntBASIC2.44□□□□□ -2.02
DffbO54788 Gm26696-201ENSMUST00000181941 2848 ntBASIC2.44□□□□□ -2.02
DffbO54788 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 179.9 ms