Protein–RNA interactions for Protein: O35177

Nedd9, Enhancer of filamentation 1, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd9O35177 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC3.17□□□□□ -1.9
Nedd9O35177 Gm29597-201ENSMUST00000188035 308 ntBASIC3.17□□□□□ -1.9
Nedd9O35177 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Nedd9O35177 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.17□□□□□ -1.9
Nedd9O35177 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Nedd9O35177 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.17□□□□□ -1.9
Nedd9O35177 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.17□□□□□ -1.9
Nedd9O35177 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.17□□□□□ -1.9
Nedd9O35177 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Nedd9O35177 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Nedd9O35177 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Nedd9O35177 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Nedd9O35177 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.16□□□□□ -1.9
Nedd9O35177 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Nedd9O35177 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
Nedd9O35177 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Nedd9O35177 Mir541-201ENSMUST00000102097 90 ntBASIC3.16□□□□□ -1.9
Nedd9O35177 Gm22784-201ENSMUST00000104088 132 ntBASIC3.16□□□□□ -1.9
Nedd9O35177 Gm12721-201ENSMUST00000120621 268 ntBASIC3.16□□□□□ -1.9
Nedd9O35177 Gm26477-201ENSMUST00000122617 323 ntBASIC3.16□□□□□ -1.9
Nedd9O35177 Gm23559-201ENSMUST00000157824 103 ntBASIC3.16□□□□□ -1.9
Nedd9O35177 Mir6917-201ENSMUST00000184111 61 ntBASIC3.16□□□□□ -1.9
Nedd9O35177 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Nedd9O35177 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Nedd9O35177 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Nedd9O35177 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.15□□□□□ -1.9
Nedd9O35177 Gm14448-201ENSMUST00000116383 210 ntBASIC3.15□□□□□ -1.91
Nedd9O35177 Gm14838-201ENSMUST00000118913 248 ntBASIC3.15□□□□□ -1.91
Nedd9O35177 Gm22026-201ENSMUST00000122735 281 ntBASIC3.15□□□□□ -1.91
Nedd9O35177 Gm22027-201ENSMUST00000122737 127 ntBASIC3.15□□□□□ -1.91
Nedd9O35177 Gm25805-201ENSMUST00000122788 108 ntBASIC3.15□□□□□ -1.91
Nedd9O35177 Gm22145-201ENSMUST00000157396 148 ntBASIC3.15□□□□□ -1.91
Nedd9O35177 Gm22316-201ENSMUST00000158012 216 ntBASIC3.15□□□□□ -1.91
Nedd9O35177 Gm27699-201ENSMUST00000183553 180 ntBASIC3.15□□□□□ -1.91
Nedd9O35177 Gm29658-201ENSMUST00000185404 230 ntBASIC3.15□□□□□ -1.91
Nedd9O35177 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.15□□□□□ -1.91
Nedd9O35177 Gm44399-201ENSMUST00000205043 226 ntBASIC3.15□□□□□ -1.91
Nedd9O35177 Gm25930-201ENSMUST00000082785 107 ntBASIC3.15□□□□□ -1.91
Nedd9O35177 Gm22443-201ENSMUST00000082890 107 ntBASIC3.15□□□□□ -1.91
Nedd9O35177 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Nedd9O35177 Gm12080-201ENSMUST00000119821 1883 ntBASIC3.15□□□□□ -1.91
Nedd9O35177 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Nedd9O35177 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Nedd9O35177 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Nedd9O35177 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.15□□□□□ -1.91
Nedd9O35177 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Nedd9O35177 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Nedd9O35177 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Nedd9O35177 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Nedd9O35177 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Nedd9O35177 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Nedd9O35177 Gm12797-201ENSMUST00000118645 273 ntBASIC3.14□□□□□ -1.91
Nedd9O35177 Gm12417-201ENSMUST00000119153 403 ntBASIC3.14□□□□□ -1.91
Nedd9O35177 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.14□□□□□ -1.91
Nedd9O35177 Gm22322-201ENSMUST00000157151 111 ntBASIC3.14□□□□□ -1.91
Nedd9O35177 Gm22961-201ENSMUST00000157964 106 ntBASIC3.14□□□□□ -1.91
Nedd9O35177 Gm24350-202ENSMUST00000198309 132 ntBASIC3.14□□□□□ -1.91
Nedd9O35177 Gm20734-201ENSMUST00000216939 193 ntBASIC3.14□□□□□ -1.91
Nedd9O35177 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.14□□□□□ -1.91
Nedd9O35177 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.14□□□□□ -1.91
Nedd9O35177 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Nedd9O35177 Mir181b-2-201ENSMUST00000083644 89 ntBASIC3.14□□□□□ -1.91
Nedd9O35177 Gm24817-201ENSMUST00000093672 105 ntBASIC3.14□□□□□ -1.91
Nedd9O35177 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Nedd9O35177 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Nedd9O35177 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Nedd9O35177 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Nedd9O35177 Gm24116-201ENSMUST00000103975 107 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Gm24867-201ENSMUST00000104161 107 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Gm15846-201ENSMUST00000116022 320 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Mir1b-201ENSMUST00000117012 122 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Gm11356-201ENSMUST00000118974 192 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Gm15162-201ENSMUST00000119325 283 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Gm22321-201ENSMUST00000157152 104 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Gm25454-201ENSMUST00000157947 315 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Gm24392-201ENSMUST00000158136 103 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Gm24056-201ENSMUST00000158617 146 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Gm24667-201ENSMUST00000158938 103 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Gm2962-201ENSMUST00000159266 336 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Gm22450-201ENSMUST00000179641 107 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Gm25473-201ENSMUST00000180191 107 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Gm26200-201ENSMUST00000180273 79 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Gm27421-201ENSMUST00000184729 167 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.13□□□□□ -1.91
Nedd9O35177 Gm28358-202ENSMUST00000189292 223 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Gm19123-201ENSMUST00000190716 651 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Gm44533-201ENSMUST00000207782 268 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.13□□□□□ -1.91
Nedd9O35177 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.13□□□□□ -1.91
Nedd9O35177 Gm24856-201ENSMUST00000082809 107 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Gm24356-201ENSMUST00000082859 106 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Gm26071-201ENSMUST00000083261 107 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Gm24521-201ENSMUST00000083958 107 ntBASIC3.13□□□□□ -1.91
Nedd9O35177 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Nedd9O35177 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Nedd9O35177 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Nedd9O35177 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Nedd9O35177 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Nedd9O35177 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Nedd9O35177 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms