Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm5899-201ENSMUST00000071770 270 ntBASIC2.55□□□□□ -2
Shisa8J3QNX5 Gm24817-201ENSMUST00000093672 105 ntBASIC2.55□□□□□ -2
Shisa8J3QNX5 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Shisa8J3QNX5 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Shisa8J3QNX5 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Shisa8J3QNX5 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.54□□□□□ -2
Shisa8J3QNX5 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
Shisa8J3QNX5 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.54□□□□□ -2
Shisa8J3QNX5 Gm24116-201ENSMUST00000103975 107 ntBASIC2.54□□□□□ -2
Shisa8J3QNX5 Gm12934-201ENSMUST00000119221 343 ntBASIC2.54□□□□□ -2
Shisa8J3QNX5 Gm25543-201ENSMUST00000122678 312 ntBASIC2.54□□□□□ -2
Shisa8J3QNX5 Gm22145-201ENSMUST00000157396 148 ntBASIC2.54□□□□□ -2
Shisa8J3QNX5 Gm22330-201ENSMUST00000158068 115 ntBASIC2.54□□□□□ -2
Shisa8J3QNX5 Gm24730-201ENSMUST00000158228 117 ntBASIC2.54□□□□□ -2
Shisa8J3QNX5 Gm24799-201ENSMUST00000178431 79 ntBASIC2.54□□□□□ -2
Shisa8J3QNX5 Gm25198-201ENSMUST00000178574 110 ntBASIC2.54□□□□□ -2
Shisa8J3QNX5 Gm25024-201ENSMUST00000179667 104 ntBASIC2.54□□□□□ -2
Shisa8J3QNX5 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC2.54□□□□□ -2
Shisa8J3QNX5 Gm43217-201ENSMUST00000199513 367 ntBASIC2.54□□□□□ -2
Shisa8J3QNX5 Gm43932-201ENSMUST00000204499 52 ntBASIC2.54□□□□□ -2
Shisa8J3QNX5 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC2.54□□□□□ -2
Shisa8J3QNX5 CT954323.1-201ENSMUST00000222774 229 ntBASIC2.54□□□□□ -2
Shisa8J3QNX5 CT009604.2-201ENSMUST00000225531 377 ntBASIC2.54□□□□□ -2
Shisa8J3QNX5 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.54□□□□□ -2
Shisa8J3QNX5 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.54□□□□□ -2
Shisa8J3QNX5 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Shisa8J3QNX5 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Shisa8J3QNX5 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Shisa8J3QNX5 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.53□□□□□ -2
Shisa8J3QNX5 Mir541-201ENSMUST00000102097 90 ntBASIC2.53□□□□□ -2
Shisa8J3QNX5 n-R5s31-201ENSMUST00000104162 110 ntBASIC2.53□□□□□ -2
Shisa8J3QNX5 Gm26341-201ENSMUST00000104561 134 ntBASIC2.53□□□□□ -2
Shisa8J3QNX5 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.53□□□□□ -2
Shisa8J3QNX5 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.53□□□□□ -2
Shisa8J3QNX5 Gm22215-201ENSMUST00000157558 96 ntBASIC2.53□□□□□ -2
Shisa8J3QNX5 Gm22537-201ENSMUST00000158172 199 ntBASIC2.53□□□□□ -2
Shisa8J3QNX5 Gm24681-201ENSMUST00000158760 107 ntBASIC2.53□□□□□ -2
Shisa8J3QNX5 Gm27699-201ENSMUST00000183553 180 ntBASIC2.53□□□□□ -2
Shisa8J3QNX5 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.53□□□□□ -2
Shisa8J3QNX5 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.53□□□□□ -2
Shisa8J3QNX5 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.53□□□□□ -2
Shisa8J3QNX5 Gm44524-201ENSMUST00000203899 271 ntBASIC2.53□□□□□ -2
Shisa8J3QNX5 Gm45002-201ENSMUST00000208045 120 ntBASIC2.53□□□□□ -2
Shisa8J3QNX5 Gm18000-201ENSMUST00000212153 800 ntBASIC2.53□□□□□ -2
Shisa8J3QNX5 Gm22443-201ENSMUST00000082890 107 ntBASIC2.53□□□□□ -2
Shisa8J3QNX5 Gm24204-201ENSMUST00000082950 107 ntBASIC2.53□□□□□ -2
Shisa8J3QNX5 Gm22294-201ENSMUST00000083308 104 ntBASIC2.53□□□□□ -2
Shisa8J3QNX5 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
Shisa8J3QNX5 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Shisa8J3QNX5 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Shisa8J3QNX5 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Shisa8J3QNX5 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm24582-201ENSMUST00000103967 103 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm23175-201ENSMUST00000104371 132 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm15183-201ENSMUST00000118933 348 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm12071-201ENSMUST00000121968 469 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm26027-201ENSMUST00000122725 268 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm22027-201ENSMUST00000122737 127 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm23331-201ENSMUST00000157423 108 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm26088-201ENSMUST00000157896 131 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm23892-201ENSMUST00000158105 130 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm24392-201ENSMUST00000158136 103 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm24667-201ENSMUST00000158938 103 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm22118-201ENSMUST00000175593 171 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm4479-201ENSMUST00000178807 171 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm27540-201ENSMUST00000184950 187 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm19123-201ENSMUST00000190716 651 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm43680-201ENSMUST00000199466 340 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm44533-201ENSMUST00000207782 268 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm7065-201ENSMUST00000222150 474 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm24152-201ENSMUST00000082764 163 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm22973-201ENSMUST00000083298 191 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Gm8935-202ENSMUST00000105727 1959 ntBASIC2.52□□□□□ -2.01
Shisa8J3QNX5 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Shisa8J3QNX5 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.51□□□□□ -2.01
Shisa8J3QNX5 Gm23609-201ENSMUST00000104542 127 ntBASIC2.51□□□□□ -2.01
Shisa8J3QNX5 Gm7123-201ENSMUST00000117647 213 ntBASIC2.51□□□□□ -2.01
Shisa8J3QNX5 Gm12412-201ENSMUST00000121867 328 ntBASIC2.51□□□□□ -2.01
Shisa8J3QNX5 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Shisa8J3QNX5 Gm23982-201ENSMUST00000157141 106 ntBASIC2.51□□□□□ -2.01
Shisa8J3QNX5 Gm24443-201ENSMUST00000157242 132 ntBASIC2.51□□□□□ -2.01
Shisa8J3QNX5 Mir5136-201ENSMUST00000175573 76 ntBASIC2.51□□□□□ -2.01
Shisa8J3QNX5 Gm27220-201ENSMUST00000183453 262 ntBASIC2.51□□□□□ -2.01
Shisa8J3QNX5 Mir6386-201ENSMUST00000183558 104 ntBASIC2.51□□□□□ -2.01
Shisa8J3QNX5 Gm28848-201ENSMUST00000189984 168 ntBASIC2.51□□□□□ -2.01
Shisa8J3QNX5 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.51□□□□□ -2.01
Shisa8J3QNX5 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.51□□□□□ -2.01
Shisa8J3QNX5 AC173482.5-201ENSMUST00000224181 327 ntBASIC2.51□□□□□ -2.01
Shisa8J3QNX5 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Shisa8J3QNX5 Snord47-201ENSMUST00000083034 77 ntBASIC2.51□□□□□ -2.01
Shisa8J3QNX5 Gm23264-201ENSMUST00000083372 107 ntBASIC2.51□□□□□ -2.01
Shisa8J3QNX5 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Shisa8J3QNX5 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 164.8 ms