Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm23048-201ENSMUST00000157237 129 ntBASIC2.06□□□□□ -2.08
Srp54bE9PXC0 Gm24573-201ENSMUST00000175499 112 ntBASIC2.06□□□□□ -2.08
Srp54bE9PXC0 Gm25933-201ENSMUST00000178943 108 ntBASIC2.06□□□□□ -2.08
Srp54bE9PXC0 Gm27317-201ENSMUST00000183533 95 ntBASIC2.06□□□□□ -2.08
Srp54bE9PXC0 Mir7026-201ENSMUST00000184384 67 ntBASIC2.06□□□□□ -2.08
Srp54bE9PXC0 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2.06□□□□□ -2.08
Srp54bE9PXC0 Gm45403-201ENSMUST00000209453 276 ntBASIC2.06□□□□□ -2.08
Srp54bE9PXC0 AC147240.1-201ENSMUST00000218767 431 ntBASIC2.06□□□□□ -2.08
Srp54bE9PXC0 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.06□□□□□ -2.08
Srp54bE9PXC0 Gm7214-201ENSMUST00000222428 272 ntBASIC2.06□□□□□ -2.08
Srp54bE9PXC0 AC164297.5-201ENSMUST00000224365 198 ntBASIC2.06□□□□□ -2.08
Srp54bE9PXC0 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
Srp54bE9PXC0 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Srp54bE9PXC0 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.06□□□□□ -2.08
Srp54bE9PXC0 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.06□□□□□ -2.08
Srp54bE9PXC0 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.05□□□□□ -2.08
Srp54bE9PXC0 Gm23011-201ENSMUST00000104148 132 ntBASIC2.05□□□□□ -2.08
Srp54bE9PXC0 Gm13439-201ENSMUST00000117541 409 ntBASIC2.05□□□□□ -2.08
Srp54bE9PXC0 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC2.05□□□□□ -2.08
Srp54bE9PXC0 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.05□□□□□ -2.08
Srp54bE9PXC0 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Srp54bE9PXC0 Gm24810-201ENSMUST00000175317 70 ntBASIC2.05□□□□□ -2.08
Srp54bE9PXC0 Gm9830-201ENSMUST00000178509 357 ntBASIC2.05□□□□□ -2.08
Srp54bE9PXC0 Mir7017-201ENSMUST00000184894 62 ntBASIC2.05□□□□□ -2.08
Srp54bE9PXC0 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Srp54bE9PXC0 Gm42672-201ENSMUST00000197821 352 ntBASIC2.05□□□□□ -2.08
Srp54bE9PXC0 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC2.05□□□□□ -2.08
Srp54bE9PXC0 AC126267.1-201ENSMUST00000214282 284 ntBASIC2.05□□□□□ -2.08
Srp54bE9PXC0 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Srp54bE9PXC0 CT485612.2-201ENSMUST00000223014 151 ntBASIC2.05□□□□□ -2.08
Srp54bE9PXC0 Gm22978-201ENSMUST00000082607 160 ntBASIC2.05□□□□□ -2.08
Srp54bE9PXC0 Gm26126-201ENSMUST00000083188 164 ntBASIC2.05□□□□□ -2.08
Srp54bE9PXC0 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
Srp54bE9PXC0 Gm14797-201ENSMUST00000119378 1480 ntBASIC2.04□□□□□ -2.08
Srp54bE9PXC0 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.04□□□□□ -2.08
Srp54bE9PXC0 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC2.04□□□□□ -2.08
Srp54bE9PXC0 Gm24858-201ENSMUST00000158058 323 ntBASIC2.04□□□□□ -2.08
Srp54bE9PXC0 Gm24837-201ENSMUST00000158683 81 ntBASIC2.04□□□□□ -2.08
Srp54bE9PXC0 Gm24177-201ENSMUST00000158927 131 ntBASIC2.04□□□□□ -2.08
Srp54bE9PXC0 Gm23191-201ENSMUST00000179147 107 ntBASIC2.04□□□□□ -2.08
Srp54bE9PXC0 Gm44337-201ENSMUST00000196553 114 ntBASIC2.04□□□□□ -2.08
Srp54bE9PXC0 Gm43676-201ENSMUST00000197532 540 ntBASIC2.04□□□□□ -2.08
Srp54bE9PXC0 Gm42807-201ENSMUST00000200141 329 ntBASIC2.04□□□□□ -2.08
Srp54bE9PXC0 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.04□□□□□ -2.08
Srp54bE9PXC0 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.04□□□□□ -2.08
Srp54bE9PXC0 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Srp54bE9PXC0 Gm25124-201ENSMUST00000083345 164 ntBASIC2.04□□□□□ -2.08
Srp54bE9PXC0 Mir300-201ENSMUST00000083485 79 ntBASIC2.04□□□□□ -2.08
Srp54bE9PXC0 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.04□□□□□ -2.08
Srp54bE9PXC0 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Srp54bE9PXC0 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Srp54bE9PXC0 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.03□□□□□ -2.08
Srp54bE9PXC0 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Srp54bE9PXC0 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
Srp54bE9PXC0 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
Srp54bE9PXC0 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Srp54bE9PXC0 Gm11935-201ENSMUST00000118608 399 ntBASIC2.03□□□□□ -2.08
Srp54bE9PXC0 Gm12721-201ENSMUST00000120621 268 ntBASIC2.03□□□□□ -2.08
Srp54bE9PXC0 Gm16510-201ENSMUST00000153501 249 ntBASIC2.03□□□□□ -2.08
Srp54bE9PXC0 Gm22037-201ENSMUST00000157280 296 ntBASIC2.03□□□□□ -2.08
Srp54bE9PXC0 Gm26345-201ENSMUST00000157534 120 ntBASIC2.03□□□□□ -2.08
Srp54bE9PXC0 Gm25368-201ENSMUST00000158847 131 ntBASIC2.03□□□□□ -2.08
Srp54bE9PXC0 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC2.03□□□□□ -2.08
Srp54bE9PXC0 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC2.03□□□□□ -2.08
Srp54bE9PXC0 Gm21754-201ENSMUST00000177550 479 ntBASIC2.03□□□□□ -2.08
Srp54bE9PXC0 Mir6399-201ENSMUST00000184050 84 ntBASIC2.03□□□□□ -2.08
Srp54bE9PXC0 Ighv2-8-201ENSMUST00000193935 262 ntBASIC2.03□□□□□ -2.08
Srp54bE9PXC0 Gm3724-201ENSMUST00000197957 349 ntBASIC2.03□□□□□ -2.08
Srp54bE9PXC0 Gm44666-201ENSMUST00000208544 391 ntBASIC2.03□□□□□ -2.08
Srp54bE9PXC0 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.03□□□□□ -2.08
Srp54bE9PXC0 Gm25801-201ENSMUST00000082638 106 ntBASIC2.03□□□□□ -2.08
Srp54bE9PXC0 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
Srp54bE9PXC0 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Srp54bE9PXC0 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.02□□□□□ -2.09
Srp54bE9PXC0 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Srp54bE9PXC0 Gm22099-201ENSMUST00000157925 123 ntBASIC2.02□□□□□ -2.09
Srp54bE9PXC0 Gm22316-201ENSMUST00000158012 216 ntBASIC2.02□□□□□ -2.09
Srp54bE9PXC0 Gm3027-201ENSMUST00000167579 451 ntBASIC2.02□□□□□ -2.09
Srp54bE9PXC0 Gm26180-201ENSMUST00000179942 107 ntBASIC2.02□□□□□ -2.09
Srp54bE9PXC0 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Srp54bE9PXC0 Gm27443-201ENSMUST00000184660 98 ntBASIC2.02□□□□□ -2.09
Srp54bE9PXC0 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC2.02□□□□□ -2.09
Srp54bE9PXC0 Gm28414-201ENSMUST00000190111 294 ntBASIC2.02□□□□□ -2.09
Srp54bE9PXC0 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC2.02□□□□□ -2.09
Srp54bE9PXC0 Gm45119-201ENSMUST00000207612 199 ntBASIC2.02□□□□□ -2.09
Srp54bE9PXC0 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.02□□□□□ -2.09
Srp54bE9PXC0 AC166358.7-201ENSMUST00000221132 108 ntBASIC2.02□□□□□ -2.09
Srp54bE9PXC0 AC125543.5-201ENSMUST00000222799 108 ntBASIC2.02□□□□□ -2.09
Srp54bE9PXC0 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.02□□□□□ -2.09
Srp54bE9PXC0 Gm26175-201ENSMUST00000083794 131 ntBASIC2.02□□□□□ -2.09
Srp54bE9PXC0 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Srp54bE9PXC0 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.02□□□□□ -2.09
Srp54bE9PXC0 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.02□□□□□ -2.09
Srp54bE9PXC0 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Srp54bE9PXC0 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.01□□□□□ -2.09
Srp54bE9PXC0 Gm26396-201ENSMUST00000104093 132 ntBASIC2.01□□□□□ -2.09
Srp54bE9PXC0 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Srp54bE9PXC0 Gm15215-201ENSMUST00000117773 489 ntBASIC2.01□□□□□ -2.09
Srp54bE9PXC0 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.01□□□□□ -2.09
Srp54bE9PXC0 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms