Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm20102-201ENSMUST00000222445 220 ntBASIC0.4□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm25698-201ENSMUST00000082897 107 ntBASIC0.4□□□□□ -2.35
Trav9-4A0A0B4J1K2 Snord118-201ENSMUST00000082965 135 ntBASIC0.4□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm24920-201ENSMUST00000083018 85 ntBASIC0.4□□□□□ -2.35
Trav9-4A0A0B4J1K2 Snora34-201ENSMUST00000083402 138 ntBASIC0.4□□□□□ -2.35
Trav9-4A0A0B4J1K2 Mir340-201ENSMUST00000083483 98 ntBASIC0.4□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm23848-201ENSMUST00000083826 106 ntBASIC0.4□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm25274-201ENSMUST00000104296 135 ntBASIC0.39□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm11248-201ENSMUST00000119568 201 ntBASIC0.39□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm22482-201ENSMUST00000122563 359 ntBASIC0.39□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm23605-201ENSMUST00000157255 127 ntBASIC0.39□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm26150-201ENSMUST00000157426 151 ntBASIC0.39□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm25663-201ENSMUST00000157698 135 ntBASIC0.39□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm25371-201ENSMUST00000158162 101 ntBASIC0.39□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm26358-201ENSMUST00000158215 97 ntBASIC0.39□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm24863-201ENSMUST00000179499 107 ntBASIC0.39□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm38060-201ENSMUST00000194822 464 ntBASIC0.39□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm35736-201ENSMUST00000203681 313 ntBASIC0.39□□□□□ -2.35
Trav9-4A0A0B4J1K2 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.39□□□□□ -2.35
Trav9-4A0A0B4J1K2 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.39□□□□□ -2.35
Trav9-4A0A0B4J1K2 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.39□□□□□ -2.35
Trav9-4A0A0B4J1K2 AC121114.1-201ENSMUST00000228522 570 ntBASIC0.39□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm9795-201ENSMUST00000062156 693 ntBASIC0.39□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm24536-201ENSMUST00000083144 107 ntBASIC0.39□□□□□ -2.35
Trav9-4A0A0B4J1K2 Snord32a-201ENSMUST00000083285 83 ntBASIC0.39□□□□□ -2.35
Trav9-4A0A0B4J1K2 AC124426.1-203ENSMUST00000221814 1362 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm25313-201ENSMUST00000101817 116 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm22003-201ENSMUST00000101885 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm14551-201ENSMUST00000120802 256 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm13577-201ENSMUST00000121365 205 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm11389-201ENSMUST00000121407 430 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm24385-201ENSMUST00000122694 350 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Rnu7-201ENSMUST00000158458 62 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm15914-201ENSMUST00000161922 309 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm24540-201ENSMUST00000177627 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm25256-201ENSMUST00000177746 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm22822-201ENSMUST00000177941 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Rnu6-201ENSMUST00000178023 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm24753-201ENSMUST00000178183 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm25829-201ENSMUST00000178275 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm22092-201ENSMUST00000178290 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm24486-201ENSMUST00000178420 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm23217-201ENSMUST00000178482 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm23092-201ENSMUST00000178688 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm23269-201ENSMUST00000178701 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm25709-201ENSMUST00000178844 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm25547-201ENSMUST00000178877 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm24722-201ENSMUST00000179017 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm22969-201ENSMUST00000179018 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm24873-201ENSMUST00000179101 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm23934-201ENSMUST00000179111 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm22623-201ENSMUST00000179244 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm25737-201ENSMUST00000179274 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm22618-201ENSMUST00000179376 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm24182-201ENSMUST00000179419 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm23287-201ENSMUST00000179427 116 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm24242-201ENSMUST00000179440 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm25064-201ENSMUST00000179535 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm26295-201ENSMUST00000179690 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm22823-201ENSMUST00000179754 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm22360-201ENSMUST00000179775 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm24978-201ENSMUST00000179782 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm24967-201ENSMUST00000179791 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm24267-201ENSMUST00000179841 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm22288-201ENSMUST00000179904 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm23410-201ENSMUST00000179967 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm22756-201ENSMUST00000180118 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm23143-201ENSMUST00000180137 116 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm23512-201ENSMUST00000180237 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm26058-201ENSMUST00000180294 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm25873-201ENSMUST00000180317 107 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm28110-201ENSMUST00000185782 315 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm28560-201ENSMUST00000186091 315 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm29057-201ENSMUST00000186468 315 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm28334-201ENSMUST00000186653 315 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm28737-201ENSMUST00000186808 315 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm29147-201ENSMUST00000186846 315 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm29118-201ENSMUST00000186908 315 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm28433-201ENSMUST00000187085 315 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm29227-201ENSMUST00000187139 315 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm28759-201ENSMUST00000187621 315 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm28831-201ENSMUST00000187739 315 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm29034-201ENSMUST00000188099 315 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm28752-201ENSMUST00000188340 315 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm28495-201ENSMUST00000188452 315 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm28474-201ENSMUST00000188501 315 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm28232-201ENSMUST00000188683 315 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm28569-201ENSMUST00000188748 315 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm28120-201ENSMUST00000188812 315 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm28369-201ENSMUST00000188993 315 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm28537-201ENSMUST00000189026 315 ntBASIC0.38□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm28481-201ENSMUST00000189231 315 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms