Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.09□□□□□ -2.23
Trav11A0A0B4J1J9 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.09□□□□□ -2.23
Trav11A0A0B4J1J9 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
Trav11A0A0B4J1J9 Mir221-201ENSMUST00000083488 95 ntBASIC1.09□□□□□ -2.23
Trav11A0A0B4J1J9 AC124426.1-203ENSMUST00000221814 1362 ntBASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Mir374b-201ENSMUST00000102314 95 ntBASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Gm12417-201ENSMUST00000119153 403 ntBASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Gm22099-201ENSMUST00000157925 123 ntBASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Gm27510-201ENSMUST00000158214 64 ntBASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Gm21815-201ENSMUST00000178213 664 ntBASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Gm28995-201ENSMUST00000186625 261 ntBASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Gm28383-201ENSMUST00000187563 139 ntBASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Gm29350-201ENSMUST00000189141 541 ntBASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Gm29262-201ENSMUST00000190084 196 ntBASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Gm44337-201ENSMUST00000196553 114 ntBASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Gm43035-201ENSMUST00000197626 517 ntBASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Mir378a-201ENSMUST00000198300 66 ntBASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Gm18453-201ENSMUST00000208000 626 ntBASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Gm26922-201ENSMUST00000082687 72 ntBASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.08□□□□□ -2.24
Trav11A0A0B4J1J9 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Gm25759-201ENSMUST00000103988 129 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Gm24282-201ENSMUST00000104232 66 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Gm25495-201ENSMUST00000104431 131 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Gm24068-201ENSMUST00000104513 132 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Gm23907-201ENSMUST00000104595 189 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Gm15526-201ENSMUST00000112504 204 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Gm22027-201ENSMUST00000122737 127 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Gm24895-201ENSMUST00000122742 74 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Gm25423-201ENSMUST00000157609 107 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Gm25914-201ENSMUST00000157618 153 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Snord13-201ENSMUST00000157627 104 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Gm22316-201ENSMUST00000158012 216 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Gm20874-201ENSMUST00000178356 663 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Gm22263-201ENSMUST00000180060 104 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Gm29352-201ENSMUST00000188054 544 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Gm28912-201ENSMUST00000189001 234 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Gm44429-201ENSMUST00000203542 186 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Gm21937-201ENSMUST00000222825 218 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Gm10092-201ENSMUST00000077110 180 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Snord118-201ENSMUST00000082965 135 ntBASIC1.07□□□□□ -2.24
Trav11A0A0B4J1J9 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 Gm23015-201ENSMUST00000104145 128 ntBASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 Gm22193-201ENSMUST00000116868 76 ntBASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 Gm23656-201ENSMUST00000122626 112 ntBASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 Gm26278-201ENSMUST00000157098 132 ntBASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 Gm22559-201ENSMUST00000157329 134 ntBASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 Gm25054-201ENSMUST00000157370 97 ntBASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 Gm26150-201ENSMUST00000157426 151 ntBASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 Gm26149-201ENSMUST00000157432 108 ntBASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 Gm24780-201ENSMUST00000157635 143 ntBASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 Gm26181-201ENSMUST00000157687 106 ntBASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 Rnu7-201ENSMUST00000158458 62 ntBASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 Gm26405-201ENSMUST00000158495 100 ntBASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 Gm23963-201ENSMUST00000179603 77 ntBASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 Trbv7-201ENSMUST00000193339 402 ntBASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.06□□□□□ -2.24
Trav11A0A0B4J1J9 Gm26396-201ENSMUST00000104093 132 ntBASIC1.05□□□□□ -2.24
Trav11A0A0B4J1J9 Mir743b-201ENSMUST00000104751 77 ntBASIC1.05□□□□□ -2.24
Trav11A0A0B4J1J9 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.05□□□□□ -2.24
Trav11A0A0B4J1J9 Gm13433-201ENSMUST00000121701 240 ntBASIC1.05□□□□□ -2.24
Trav11A0A0B4J1J9 Gm24858-201ENSMUST00000158058 323 ntBASIC1.05□□□□□ -2.24
Trav11A0A0B4J1J9 Gm24348-201ENSMUST00000158710 130 ntBASIC1.05□□□□□ -2.24
Trav11A0A0B4J1J9 Gm24174-201ENSMUST00000158933 111 ntBASIC1.05□□□□□ -2.24
Trav11A0A0B4J1J9 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.05□□□□□ -2.24
Trav11A0A0B4J1J9 Gm29005-201ENSMUST00000186773 320 ntBASIC1.05□□□□□ -2.24
Trav11A0A0B4J1J9 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.05□□□□□ -2.24
Trav11A0A0B4J1J9 Gm7495-201ENSMUST00000215099 426 ntBASIC1.05□□□□□ -2.24
Trav11A0A0B4J1J9 AC162934.3-201ENSMUST00000223015 841 ntBASIC1.05□□□□□ -2.24
Trav11A0A0B4J1J9 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Trav11A0A0B4J1J9 Gm25896-201ENSMUST00000083713 136 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms