Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.26□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm33866-201ENSMUST00000196911 289 ntBASIC1.26□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm43512-201ENSMUST00000198495 176 ntBASIC1.26□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm43583-201ENSMUST00000199235 303 ntBASIC1.26□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm40810-201ENSMUST00000219149 253 ntBASIC1.26□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm18696-201ENSMUST00000220103 274 ntBASIC1.26□□□□□ -2.21
Trbv1A0A0B4J1G7 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.26□□□□□ -2.21
Trbv1A0A0B4J1G7 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.26□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm19441-201ENSMUST00000221545 330 ntBASIC1.26□□□□□ -2.21
Trbv1A0A0B4J1G7 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.26□□□□□ -2.21
Trbv1A0A0B4J1G7 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.26□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm25589-201ENSMUST00000082502 166 ntBASIC1.26□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm24150-201ENSMUST00000082759 104 ntBASIC1.26□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm22723-201ENSMUST00000083820 129 ntBASIC1.26□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm10360-201ENSMUST00000097219 272 ntBASIC1.26□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.26□□□□□ -2.21
Trbv1A0A0B4J1G7 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.26□□□□□ -2.21
Trbv1A0A0B4J1G7 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Mir758-201ENSMUST00000103260 81 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm25421-201ENSMUST00000104218 164 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm13714-201ENSMUST00000117313 221 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm13432-201ENSMUST00000118861 241 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm23983-201ENSMUST00000157142 114 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm25115-201ENSMUST00000157187 140 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm26024-201ENSMUST00000158657 322 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm24084-201ENSMUST00000175173 137 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Mir28b-201ENSMUST00000175399 80 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm18588-201ENSMUST00000177308 492 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm22308-201ENSMUST00000177609 107 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Mir6341-201ENSMUST00000183490 121 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Mir6406-201ENSMUST00000183592 120 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Mir6352-201ENSMUST00000184495 116 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Mir195b-201ENSMUST00000184814 97 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Mir7062-201ENSMUST00000185038 66 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm28506-201ENSMUST00000189937 150 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm5001-201ENSMUST00000204361 331 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.25□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.24□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm25992-201ENSMUST00000102437 109 ntBASIC1.24□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm24338-201ENSMUST00000104205 127 ntBASIC1.24□□□□□ -2.21
Trbv1A0A0B4J1G7 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC1.24□□□□□ -2.21
Trbv1A0A0B4J1G7 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC1.24□□□□□ -2.21
Trbv1A0A0B4J1G7 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC1.24□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm24409-201ENSMUST00000157881 152 ntBASIC1.24□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm27510-201ENSMUST00000158214 64 ntBASIC1.24□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm22664-201ENSMUST00000158719 105 ntBASIC1.24□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm26335-201ENSMUST00000178449 107 ntBASIC1.24□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm44384-201ENSMUST00000200208 114 ntBASIC1.24□□□□□ -2.21
Trbv1A0A0B4J1G7 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.24□□□□□ -2.21
Trbv1A0A0B4J1G7 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.24□□□□□ -2.21
Trbv1A0A0B4J1G7 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm22683-201ENSMUST00000082854 137 ntBASIC1.24□□□□□ -2.21
Trbv1A0A0B4J1G7 Mir429-201ENSMUST00000083493 83 ntBASIC1.24□□□□□ -2.21
Trbv1A0A0B4J1G7 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.24□□□□□ -2.21
Trbv1A0A0B4J1G7 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Trbv1A0A0B4J1G7 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm23950-201ENSMUST00000104026 129 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm26249-201ENSMUST00000116708 118 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm13672-201ENSMUST00000117554 459 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm14674-201ENSMUST00000117816 342 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm25279-201ENSMUST00000122608 133 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm24419-201ENSMUST00000157875 332 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm24393-201ENSMUST00000158135 97 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm23858-201ENSMUST00000158384 106 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm24174-201ENSMUST00000158933 111 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Mir3086-201ENSMUST00000175072 87 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Mir7679-201ENSMUST00000183379 63 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm34073-201ENSMUST00000195736 212 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm44387-201ENSMUST00000196298 145 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm25820-202ENSMUST00000197479 128 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm42960-201ENSMUST00000202160 241 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm24623-201ENSMUST00000082616 194 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm22299-201ENSMUST00000082663 136 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm25896-201ENSMUST00000083713 136 ntBASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm22713-201ENSMUST00000116895 130 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm12225-201ENSMUST00000117995 298 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm12770-201ENSMUST00000121734 462 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms