Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Gm7495-201ENSMUST00000215099 426 ntBASIC1.23□□□□□ -2.21
Trav12-3A0A075B648 Gm20102-201ENSMUST00000222445 220 ntBASIC1.23□□□□□ -2.21
Trav12-3A0A075B648 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC1.23□□□□□ -2.21
Trav12-3A0A075B648 AC108945.1-201ENSMUST00000226477 94 ntBASIC1.23□□□□□ -2.21
Trav12-3A0A075B648 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 Gm23015-201ENSMUST00000104145 128 ntBASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 Gm12417-201ENSMUST00000119153 403 ntBASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 Gm12433-201ENSMUST00000119659 255 ntBASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 Gm22555-201ENSMUST00000157801 62 ntBASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 Gm23043-201ENSMUST00000157890 109 ntBASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 Gm24851-201ENSMUST00000158028 103 ntBASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 Gm24005-201ENSMUST00000158459 296 ntBASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 Gm20660-201ENSMUST00000177515 289 ntBASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 Mir6911-201ENSMUST00000184241 69 ntBASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 Gm37054-201ENSMUST00000193481 543 ntBASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 Gm45907-201ENSMUST00000213023 193 ntBASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 AC116589.3-202ENSMUST00000221770 649 ntBASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 AC116589.6-201ENSMUST00000222252 649 ntBASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 Gm25801-201ENSMUST00000082638 106 ntBASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 Gm24615-201ENSMUST00000083268 113 ntBASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.22□□□□□ -2.21
Trav12-3A0A075B648 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Trav12-3A0A075B648 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.21□□□□□ -2.22
Trav12-3A0A075B648 Gm6071-201ENSMUST00000119561 440 ntBASIC1.21□□□□□ -2.22
Trav12-3A0A075B648 Gm22718-201ENSMUST00000122701 315 ntBASIC1.21□□□□□ -2.22
Trav12-3A0A075B648 Gm25486-201ENSMUST00000158726 63 ntBASIC1.21□□□□□ -2.22
Trav12-3A0A075B648 Cfap61-214ENSMUST00000167179 183 ntBASIC1.21□□□□□ -2.22
Trav12-3A0A075B648 Gm21816-201ENSMUST00000179255 360 ntBASIC1.21□□□□□ -2.22
Trav12-3A0A075B648 Mir6901-201ENSMUST00000185062 62 ntBASIC1.21□□□□□ -2.22
Trav12-3A0A075B648 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.21□□□□□ -2.22
Trav12-3A0A075B648 Gm8023-201ENSMUST00000195298 903 ntBASIC1.21□□□□□ -2.22
Trav12-3A0A075B648 AC166358.10-201ENSMUST00000220556 144 ntBASIC1.21□□□□□ -2.22
Trav12-3A0A075B648 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.21□□□□□ -2.22
Trav12-3A0A075B648 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.21□□□□□ -2.22
Trav12-3A0A075B648 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.21□□□□□ -2.22
Trav12-3A0A075B648 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Trav12-3A0A075B648 Gm24536-201ENSMUST00000083144 107 ntBASIC1.21□□□□□ -2.22
Trav12-3A0A075B648 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Trav12-3A0A075B648 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.21□□□□□ -2.22
Trav12-3A0A075B648 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 Gm11512-201ENSMUST00000119669 663 ntBASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 Gm6025-201ENSMUST00000121517 201 ntBASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 Gm27926-201ENSMUST00000157180 66 ntBASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 Gm22082-201ENSMUST00000157587 161 ntBASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 Gm23854-201ENSMUST00000158378 108 ntBASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 Gm26405-201ENSMUST00000158495 100 ntBASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 Gm24174-201ENSMUST00000158933 111 ntBASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 Gm24390-201ENSMUST00000179578 62 ntBASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 Mir7578-201ENSMUST00000183455 82 ntBASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 Gm27505-201ENSMUST00000185071 110 ntBASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 Gm26265-202ENSMUST00000196326 133 ntBASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 AC153870.1-201ENSMUST00000219599 560 ntBASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 Snord68-201ENSMUST00000082516 86 ntBASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 Snord118-201ENSMUST00000082965 135 ntBASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 Gm23731-201ENSMUST00000083749 107 ntBASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC1.2□□□□□ -2.22
Trav12-3A0A075B648 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 Gm22656-201ENSMUST00000104199 171 ntBASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 Gm6829-201ENSMUST00000119858 360 ntBASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 Gm15986-201ENSMUST00000122153 400 ntBASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 Gm23889-201ENSMUST00000122689 104 ntBASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 Gm24262-201ENSMUST00000157431 144 ntBASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 Gm22963-201ENSMUST00000157960 91 ntBASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 Gm22726-201ENSMUST00000158089 179 ntBASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 Gm26401-201ENSMUST00000158502 76 ntBASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 Gm24551-201ENSMUST00000158645 92 ntBASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 Gm17100-201ENSMUST00000168963 272 ntBASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 Gm27834-201ENSMUST00000183427 125 ntBASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 Gm27236-201ENSMUST00000184147 442 ntBASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 Gm27539-201ENSMUST00000184971 224 ntBASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 Gm43587-201ENSMUST00000199590 204 ntBASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 Gm8125-201ENSMUST00000216602 738 ntBASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 AC167192.1-201ENSMUST00000225908 139 ntBASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 AC102603.1-201ENSMUST00000227481 584 ntBASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 Gm5899-201ENSMUST00000071770 270 ntBASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 Gm25579-201ENSMUST00000083407 106 ntBASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
Trav12-3A0A075B648 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.18□□□□□ -2.22
Trav12-3A0A075B648 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.18□□□□□ -2.22
Trav12-3A0A075B648 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Trav12-3A0A075B648 Gm13714-201ENSMUST00000117313 221 ntBASIC1.18□□□□□ -2.22
Trav12-3A0A075B648 Gm13475-201ENSMUST00000119290 234 ntBASIC1.18□□□□□ -2.22
Trav12-3A0A075B648 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Trav12-3A0A075B648 Gm23535-201ENSMUST00000157542 106 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms