Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm16362-201ENSMUST00000135189 214 ntBASIC1.89□□□□□ -2.11
Trav1A0A075B5Z4 Gm16358-201ENSMUST00000146046 210 ntBASIC1.89□□□□□ -2.11
Trav1A0A075B5Z4 Gm24911-201ENSMUST00000157292 136 ntBASIC1.89□□□□□ -2.11
Trav1A0A075B5Z4 Gm23779-201ENSMUST00000157938 64 ntBASIC1.89□□□□□ -2.11
Trav1A0A075B5Z4 Gm22727-201ENSMUST00000158090 116 ntBASIC1.89□□□□□ -2.11
Trav1A0A075B5Z4 Gm25488-201ENSMUST00000158728 118 ntBASIC1.89□□□□□ -2.11
Trav1A0A075B5Z4 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.89□□□□□ -2.11
Trav1A0A075B5Z4 Gm24487-201ENSMUST00000178017 63 ntBASIC1.89□□□□□ -2.11
Trav1A0A075B5Z4 Gm44063-201ENSMUST00000203307 376 ntBASIC1.89□□□□□ -2.11
Trav1A0A075B5Z4 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.89□□□□□ -2.11
Trav1A0A075B5Z4 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.89□□□□□ -2.11
Trav1A0A075B5Z4 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Trav1A0A075B5Z4 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Trav1A0A075B5Z4 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trav1A0A075B5Z4 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 Gm12785-201ENSMUST00000122052 172 ntBASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 Gm26105-201ENSMUST00000157253 190 ntBASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 Gm22113-201ENSMUST00000158343 104 ntBASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 Gm28016-201ENSMUST00000184594 196 ntBASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 Gm29553-201ENSMUST00000189692 279 ntBASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 Ighv1-28-201ENSMUST00000192987 351 ntBASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 Ighv1-46-201ENSMUST00000193988 351 ntBASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 Gm9318-201ENSMUST00000222444 438 ntBASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 Gm25651-201ENSMUST00000083782 119 ntBASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 Gm23345-201ENSMUST00000083817 150 ntBASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 Gm23041-201ENSMUST00000083868 106 ntBASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Trav1A0A075B5Z4 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Gm25094-201ENSMUST00000103992 131 ntBASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Gm24282-201ENSMUST00000104232 66 ntBASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Mir669i-201ENSMUST00000117007 127 ntBASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Gm14774-201ENSMUST00000117857 536 ntBASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Gm12956-201ENSMUST00000122184 414 ntBASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Gm24892-201ENSMUST00000122747 104 ntBASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Gm26345-201ENSMUST00000157534 120 ntBASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Gm24388-201ENSMUST00000177872 107 ntBASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Gm23190-201ENSMUST00000180307 64 ntBASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Gm28008-201ENSMUST00000184021 186 ntBASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Gm27399-201ENSMUST00000184250 78 ntBASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Gm28579-201ENSMUST00000186143 369 ntBASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Gm28744-201ENSMUST00000189939 340 ntBASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Gm44477-201ENSMUST00000199661 110 ntBASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 AC160962.2-201ENSMUST00000224761 632 ntBASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 AC129017.1-201ENSMUST00000228363 270 ntBASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Gm23412-201ENSMUST00000083017 107 ntBASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Gm37566-201ENSMUST00000192363 4355 ntBASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Trav1A0A075B5Z4 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Trav1A0A075B5Z4 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.86□□□□□ -2.11
Trav1A0A075B5Z4 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.86□□□□□ -2.11
Trav1A0A075B5Z4 Gm26473-201ENSMUST00000116763 127 ntBASIC1.86□□□□□ -2.11
Trav1A0A075B5Z4 Gm25625-201ENSMUST00000157221 96 ntBASIC1.86□□□□□ -2.11
Trav1A0A075B5Z4 Gm25020-201ENSMUST00000178071 107 ntBASIC1.86□□□□□ -2.11
Trav1A0A075B5Z4 Gm25457-201ENSMUST00000179509 107 ntBASIC1.86□□□□□ -2.11
Trav1A0A075B5Z4 Mir6399-201ENSMUST00000184050 84 ntBASIC1.86□□□□□ -2.11
Trav1A0A075B5Z4 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Trav1A0A075B5Z4 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Trav1A0A075B5Z4 Gm44024-201ENSMUST00000203008 476 ntBASIC1.86□□□□□ -2.11
Trav1A0A075B5Z4 Gm44419-201ENSMUST00000203338 229 ntBASIC1.86□□□□□ -2.11
Trav1A0A075B5Z4 Gm44938-201ENSMUST00000208614 427 ntBASIC1.86□□□□□ -2.11
Trav1A0A075B5Z4 AC116460.1-201ENSMUST00000219040 313 ntBASIC1.86□□□□□ -2.11
Trav1A0A075B5Z4 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.86□□□□□ -2.11
Trav1A0A075B5Z4 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Trav1A0A075B5Z4 Snord104-201ENSMUST00000083192 70 ntBASIC1.86□□□□□ -2.11
Trav1A0A075B5Z4 Gm22287-201ENSMUST00000083197 107 ntBASIC1.86□□□□□ -2.11
Trav1A0A075B5Z4 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Trav1A0A075B5Z4 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC1.86□□□□□ -2.11
Trav1A0A075B5Z4 Gm43540-201ENSMUST00000196320 3848 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Gm24280-201ENSMUST00000104237 134 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Gm25529-201ENSMUST00000104850 92 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Mdga2-203ENSMUST00000113942 423 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Gm13880-201ENSMUST00000118421 474 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Gm12235-201ENSMUST00000118596 170 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Gm5396-201ENSMUST00000121222 532 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Gm22479-201ENSMUST00000122566 81 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Gm24478-201ENSMUST00000157439 158 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Gm22483-201ENSMUST00000157986 274 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Gm24726-201ENSMUST00000158232 121 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Gm22945-201ENSMUST00000158557 157 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Gm22263-201ENSMUST00000180060 104 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Gm27443-201ENSMUST00000184660 98 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Gm37162-201ENSMUST00000191708 551 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms