Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm25284-201ENSMUST00000180345 141 ntBASIC2.13□□□□□ -2.07
H2afb1S4R1E0 Gm28016-201ENSMUST00000184594 196 ntBASIC2.13□□□□□ -2.07
H2afb1S4R1E0 Gm27753-201ENSMUST00000184742 203 ntBASIC2.13□□□□□ -2.07
H2afb1S4R1E0 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
H2afb1S4R1E0 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.13□□□□□ -2.07
H2afb1S4R1E0 Gm28408-201ENSMUST00000191557 463 ntBASIC2.13□□□□□ -2.07
H2afb1S4R1E0 Gm44083-201ENSMUST00000203114 337 ntBASIC2.13□□□□□ -2.07
H2afb1S4R1E0 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.13□□□□□ -2.07
H2afb1S4R1E0 Gm40810-201ENSMUST00000219149 253 ntBASIC2.13□□□□□ -2.07
H2afb1S4R1E0 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.13□□□□□ -2.07
H2afb1S4R1E0 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.13□□□□□ -2.07
H2afb1S4R1E0 Gm25632-201ENSMUST00000083112 85 ntBASIC2.13□□□□□ -2.07
H2afb1S4R1E0 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.13□□□□□ -2.07
H2afb1S4R1E0 Gm25628-201ENSMUST00000084002 105 ntBASIC2.13□□□□□ -2.07
H2afb1S4R1E0 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
H2afb1S4R1E0 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.13□□□□□ -2.07
H2afb1S4R1E0 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
H2afb1S4R1E0 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
H2afb1S4R1E0 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
H2afb1S4R1E0 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.12□□□□□ -2.07
H2afb1S4R1E0 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
H2afb1S4R1E0 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
H2afb1S4R1E0 Gm23120-201ENSMUST00000157654 287 ntBASIC2.12□□□□□ -2.07
H2afb1S4R1E0 Gm24210-201ENSMUST00000158263 133 ntBASIC2.12□□□□□ -2.07
H2afb1S4R1E0 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
H2afb1S4R1E0 Gm27760-201ENSMUST00000185048 114 ntBASIC2.12□□□□□ -2.07
H2afb1S4R1E0 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.12□□□□□ -2.07
H2afb1S4R1E0 Gm42570-201ENSMUST00000195937 292 ntBASIC2.12□□□□□ -2.07
H2afb1S4R1E0 Gm43193-201ENSMUST00000197732 441 ntBASIC2.12□□□□□ -2.07
H2afb1S4R1E0 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.12□□□□□ -2.07
H2afb1S4R1E0 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.12□□□□□ -2.07
H2afb1S4R1E0 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.12□□□□□ -2.07
H2afb1S4R1E0 Gm46389-201ENSMUST00000223199 392 ntBASIC2.12□□□□□ -2.07
H2afb1S4R1E0 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.12□□□□□ -2.07
H2afb1S4R1E0 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
H2afb1S4R1E0 Mir701-201ENSMUST00000102208 109 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Gm23202-201ENSMUST00000104376 129 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Gm13672-201ENSMUST00000117554 459 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Gm15379-201ENSMUST00000121224 648 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Gm14770-201ENSMUST00000122197 312 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Gm14402-201ENSMUST00000122217 508 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Gm22083-201ENSMUST00000157586 102 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Gm22101-201ENSMUST00000157928 103 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Gm25454-201ENSMUST00000157947 315 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Gm22517-201ENSMUST00000158265 136 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Gm23005-201ENSMUST00000158950 136 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Gm29397-201ENSMUST00000185205 333 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Gm44337-201ENSMUST00000196553 114 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Gm43035-201ENSMUST00000197626 517 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Gm43680-201ENSMUST00000199466 340 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.11□□□□□ -2.07
H2afb1S4R1E0 AC161426.1-201ENSMUST00000214137 286 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Gm24313-201ENSMUST00000082561 133 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Gm23412-201ENSMUST00000083017 107 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Gm23040-201ENSMUST00000083869 163 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
H2afb1S4R1E0 Gm26247-201ENSMUST00000116702 91 ntBASIC2.1□□□□□ -2.07
H2afb1S4R1E0 Gm14894-201ENSMUST00000117170 270 ntBASIC2.1□□□□□ -2.07
H2afb1S4R1E0 Gm13756-201ENSMUST00000117618 222 ntBASIC2.1□□□□□ -2.07
H2afb1S4R1E0 Gm16021-201ENSMUST00000121176 219 ntBASIC2.1□□□□□ -2.07
H2afb1S4R1E0 Gm13862-201ENSMUST00000121220 197 ntBASIC2.1□□□□□ -2.07
H2afb1S4R1E0 Gm14761-201ENSMUST00000121363 262 ntBASIC2.1□□□□□ -2.07
H2afb1S4R1E0 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.1□□□□□ -2.07
H2afb1S4R1E0 Gm16355-201ENSMUST00000128606 231 ntBASIC2.1□□□□□ -2.07
H2afb1S4R1E0 Gm26280-201ENSMUST00000157096 101 ntBASIC2.1□□□□□ -2.07
H2afb1S4R1E0 Gm8580-201ENSMUST00000160295 464 ntBASIC2.1□□□□□ -2.07
H2afb1S4R1E0 Mir5624-201ENSMUST00000176635 61 ntBASIC2.1□□□□□ -2.07
H2afb1S4R1E0 Gm27761-201ENSMUST00000184091 131 ntBASIC2.1□□□□□ -2.07
H2afb1S4R1E0 Gm37449-201ENSMUST00000193016 270 ntBASIC2.1□□□□□ -2.07
H2afb1S4R1E0 Gm37889-201ENSMUST00000194174 251 ntBASIC2.1□□□□□ -2.07
H2afb1S4R1E0 Gm18658-201ENSMUST00000195558 270 ntBASIC2.1□□□□□ -2.07
H2afb1S4R1E0 Gm44373-201ENSMUST00000196112 169 ntBASIC2.1□□□□□ -2.07
H2afb1S4R1E0 Mir3068-202ENSMUST00000197755 79 ntBASIC2.1□□□□□ -2.07
H2afb1S4R1E0 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.1□□□□□ -2.07
H2afb1S4R1E0 Gm22685-201ENSMUST00000082848 106 ntBASIC2.1□□□□□ -2.07
H2afb1S4R1E0 Mir30d-201ENSMUST00000083503 82 ntBASIC2.1□□□□□ -2.07
H2afb1S4R1E0 Gm26314-201ENSMUST00000083891 107 ntBASIC2.1□□□□□ -2.07
H2afb1S4R1E0 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
H2afb1S4R1E0 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
H2afb1S4R1E0 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.09□□□□□ -2.07
H2afb1S4R1E0 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
H2afb1S4R1E0 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
H2afb1S4R1E0 Gm14652-201ENSMUST00000118479 235 ntBASIC2.09□□□□□ -2.07
H2afb1S4R1E0 Gm25269-201ENSMUST00000122601 104 ntBASIC2.09□□□□□ -2.07
H2afb1S4R1E0 Gm24911-201ENSMUST00000157292 136 ntBASIC2.09□□□□□ -2.07
H2afb1S4R1E0 Gm23331-201ENSMUST00000157423 108 ntBASIC2.09□□□□□ -2.07
H2afb1S4R1E0 Gm22382-201ENSMUST00000158185 130 ntBASIC2.09□□□□□ -2.07
H2afb1S4R1E0 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2.09□□□□□ -2.07
H2afb1S4R1E0 Gm24618-201ENSMUST00000177718 94 ntBASIC2.09□□□□□ -2.07
H2afb1S4R1E0 Gm23953-201ENSMUST00000178214 94 ntBASIC2.09□□□□□ -2.07
H2afb1S4R1E0 Gm26332-201ENSMUST00000179813 94 ntBASIC2.09□□□□□ -2.07
H2afb1S4R1E0 Gm22863-201ENSMUST00000180265 94 ntBASIC2.09□□□□□ -2.07
H2afb1S4R1E0 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms