| Aire | Q9Z0E3 | Gm16355-201 | ENSMUST00000128606 | 231 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| Aire | Q9Z0E3 | Gm24716-201 | ENSMUST00000157524 | 104 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| Aire | Q9Z0E3 | Gm27510-201 | ENSMUST00000158214 | 64 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| Aire | Q9Z0E3 | Gm22192-201 | ENSMUST00000175128 | 85 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| Aire | Q9Z0E3 | Mir7026-201 | ENSMUST00000184384 | 67 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| Aire | Q9Z0E3 | Mir7009-201 | ENSMUST00000184519 | 64 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| Aire | Q9Z0E3 | Trbv6-201 | ENSMUST00000193743 | 276 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| Aire | Q9Z0E3 | Ighv2-8-201 | ENSMUST00000193935 | 262 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| Aire | Q9Z0E3 | Gm34073-201 | ENSMUST00000195736 | 212 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| Aire | Q9Z0E3 | Gm44083-201 | ENSMUST00000203114 | 337 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| Aire | Q9Z0E3 | Gm45315-201 | ENSMUST00000209283 | 333 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| Aire | Q9Z0E3 | Gm45704-201 | ENSMUST00000212582 | 403 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| Aire | Q9Z0E3 | AC158598.1-201 | ENSMUST00000214349 | 3847 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| Aire | Q9Z0E3 | AC164297.3-201 | ENSMUST00000224238 | 94 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| Aire | Q9Z0E3 | AC165106.2-201 | ENSMUST00000226749 | 97 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| Aire | Q9Z0E3 | 1700010L04Rik-201 | ENSMUST00000032872 | 330 nt | TSL 5 BASIC | 1.84 | □□□□□ -2.11 | | |
| Aire | Q9Z0E3 | Gm22443-201 | ENSMUST00000082890 | 107 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| Aire | Q9Z0E3 | Gm25632-201 | ENSMUST00000083112 | 85 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| Aire | Q9Z0E3 | Gm10800-201 | ENSMUST00000099683 | 660 nt | APPRIS P1 TSL 5 BASIC | 1.84 | □□□□□ -2.11 | | |
| Aire | Q9Z0E3 | Gm37661-201 | ENSMUST00000191863 | 1550 nt | BASIC | 1.84 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Olfr1448-203 | ENSMUST00000213713 | 4336 nt | APPRIS P1 TSL 5 BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm45652-201 | ENSMUST00000210926 | 3831 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Olfr1208-203 | ENSMUST00000214297 | 2844 nt | APPRIS P1 TSL 5 BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm24126-201 | ENSMUST00000104111 | 106 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm15183-201 | ENSMUST00000118933 | 348 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm15067-201 | ENSMUST00000119534 | 156 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm13903-201 | ENSMUST00000120945 | 193 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm15008-201 | ENSMUST00000147429 | 460 nt | TSL 3 BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm24010-201 | ENSMUST00000157731 | 282 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm25384-201 | ENSMUST00000157807 | 105 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm24997-201 | ENSMUST00000157910 | 105 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm25460-201 | ENSMUST00000157954 | 127 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm22527-201 | ENSMUST00000158816 | 106 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Obox4-ps34-201 | ENSMUST00000175879 | 520 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Mir7667-201 | ENSMUST00000183866 | 63 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm5329-201 | ENSMUST00000186898 | 463 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm38171-201 | ENSMUST00000195716 | 478 nt | TSL 3 BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm43512-201 | ENSMUST00000198495 | 176 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm33654-201 | ENSMUST00000221704 | 215 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm35732-201 | ENSMUST00000221737 | 356 nt | TSL 3 BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | AC116589.4-201 | ENSMUST00000222390 | 216 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm21937-201 | ENSMUST00000222825 | 218 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | AC192333.1-201 | ENSMUST00000224573 | 376 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm22620-201 | ENSMUST00000082700 | 133 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm24765-201 | ENSMUST00000083691 | 103 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm45558-201 | ENSMUST00000209384 | 1895 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm43473-201 | ENSMUST00000200442 | 5997 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Olfr611-202 | ENSMUST00000216074 | 2301 nt | APPRIS P1 TSL 5 BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Vma21-ps-201 | ENSMUST00000114578 | 306 nt | APPRIS P1 BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm13588-201 | ENSMUST00000120026 | 135 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm14709-201 | ENSMUST00000121225 | 304 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm23230-201 | ENSMUST00000157298 | 133 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm24878-201 | ENSMUST00000158782 | 104 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Ear10-201 | ENSMUST00000159175 | 678 nt | APPRIS P1 TSL 1 (best) BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm25121-201 | ENSMUST00000179846 | 79 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm26914-201 | ENSMUST00000182262 | 223 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Mir6379-201 | ENSMUST00000183392 | 115 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Mir6370-201 | ENSMUST00000183510 | 120 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm28710-201 | ENSMUST00000186866 | 489 nt | TSL 5 BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm38361-201 | ENSMUST00000193419 | 458 nt | TSL 5 BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm18971-201 | ENSMUST00000197240 | 374 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Igkv1-108-201 | ENSMUST00000198926 | 298 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm8013-201 | ENSMUST00000200139 | 462 nt | TSL 2 BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm45150-201 | ENSMUST00000206051 | 467 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | AC154472.1-201 | ENSMUST00000222663 | 236 nt | TSL 3 BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | AC133598.3-201 | ENSMUST00000224322 | 568 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | AC135292.1-201 | ENSMUST00000227665 | 204 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm23247-201 | ENSMUST00000083373 | 107 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm26327-201 | ENSMUST00000093724 | 111 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm36989-201 | ENSMUST00000193225 | 2160 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Olfr498-201 | ENSMUST00000217616 | 2260 nt | APPRIS P1 BASIC | 1.82 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Olfr479-202 | ENSMUST00000209805 | 2902 nt | APPRIS P1 TSL 5 BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Olfr801-203 | ENSMUST00000213294 | 4045 nt | APPRIS P1 TSL 5 BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm24338-201 | ENSMUST00000104205 | 127 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Mir3096-201 | ENSMUST00000116685 | 71 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Mir669d-2-201 | ENSMUST00000116854 | 86 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm13457-201 | ENSMUST00000117885 | 267 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm12513-201 | ENSMUST00000118617 | 352 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Rps13-ps8-201 | ENSMUST00000118906 | 401 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm6444-201 | ENSMUST00000119611 | 458 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | n-R5s159-201 | ENSMUST00000122681 | 120 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm16349-201 | ENSMUST00000149990 | 394 nt | TSL 3 BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm24481-201 | ENSMUST00000157210 | 102 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm22791-201 | ENSMUST00000157232 | 145 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm24908-201 | ENSMUST00000157294 | 127 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm25054-201 | ENSMUST00000157370 | 97 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm24601-201 | ENSMUST00000157970 | 143 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm24192-201 | ENSMUST00000157978 | 145 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm22093-201 | ENSMUST00000158980 | 111 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Mir3569-201 | ENSMUST00000185080 | 58 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm28740-201 | ENSMUST00000186142 | 215 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm20885-201 | ENSMUST00000190192 | 654 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Trbv18-201 | ENSMUST00000194256 | 294 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Trav15n-3-201 | ENSMUST00000200498 | 168 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Gm45375-201 | ENSMUST00000210338 | 280 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | D730003K21Rik-201 | ENSMUST00000215052 | 589 nt | TSL 2 BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Lilr4b-211 | ENSMUST00000219661 | 1143 nt | TSL 1 (best) BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | AC131759.1-201 | ENSMUST00000220642 | 310 nt | TSL 3 BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | AC122393.1-201 | ENSMUST00000226570 | 319 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| Aire | Q9Z0E3 | Pip-201 | ENSMUST00000075351 | 588 nt | APPRIS P1 TSL 1 (best) BASIC | 1.81 | □□□□□ -2.12 | | |